RNA–Protein interactions for RNA: ENST00000521478.1

HOXA6-202, Transcript of homeobox A6, humanhuman

TSL 3

Gene HOXA6, Length 814 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA6-202ENST00000521478 TRPV6Q9H1D0 765 aa17.52■□□□□ 0.4
HOXA6-202ENST00000521478 PNMA2Q9UL42 364 aa17.52■□□□□ 0.4
HOXA6-202ENST00000521478 RBM47A0AV96 593 aaKnown RBP17.51■□□□□ 0.39
HOXA6-202ENST00000521478 PTPDC1A2A3K4 754 aa17.51■□□□□ 0.39
HOXA6-202ENST00000521478 FGBP02675 491 aa17.51■□□□□ 0.39
HOXA6-202ENST00000521478 HAND2P61296 217 aa17.51■□□□□ 0.39
HOXA6-202ENST00000521478 PSMC6P62333 389 aa17.51■□□□□ 0.39
HOXA6-202ENST00000521478 ZNF543Q08ER8 600 aa17.51■□□□□ 0.39
HOXA6-202ENST00000521478 AKNAD1Q5T1N1 836 aa17.51■□□□□ 0.39
HOXA6-202ENST00000521478 MFSD6Q6ZSS7 791 aa17.51■□□□□ 0.39
HOXA6-202ENST00000521478 NOC4LQ9BVI4 516 aaKnown RBP17.51■□□□□ 0.39
HOXA6-202ENST00000521478 UMODL1Q5DID0 1318 aa17.5■□□□□ 0.39
HOXA6-202ENST00000521478 CCDC171Q6TFL3 1326 aa17.5■□□□□ 0.39
HOXA6-202ENST00000521478 TRIM6-TRIM34B2RNG4 842 aa17.5■□□□□ 0.39
HOXA6-202ENST00000521478 B4GALT4O60513 344 aa17.5■□□□□ 0.39
HOXA6-202ENST00000521478 SNHG28P0DPA3 235 aa17.5■□□□□ 0.39
HOXA6-202ENST00000521478 RNF207Q6ZRF8 634 aa17.5■□□□□ 0.39
HOXA6-202ENST00000521478 LNPKQ9C0E8 428 aa17.5■□□□□ 0.39
HOXA6-202ENST00000521478 MTIF3Q9H2K0 278 aaKnown RBP17.5■□□□□ 0.39
HOXA6-202ENST00000521478 POLR3EQ9NVU0 708 aa17.5■□□□□ 0.39
HOXA6-202ENST00000521478 CXXC1Q9P0U4 656 aaPredicted RBP17.5■□□□□ 0.39
HOXA6-202ENST00000521478 EYSQ5T1H1 3165 aa17.49■□□□□ 0.39
HOXA6-202ENST00000521478 CALML3P27482 149 aa17.49■□□□□ 0.39
HOXA6-202ENST00000521478 CCL23P55773 120 aa17.49■□□□□ 0.39
HOXA6-202ENST00000521478 SLC30A10Q6XR72 485 aa17.49■□□□□ 0.39
HOXA6-202ENST00000521478 TBC1D10CQ8IV04 446 aa17.49■□□□□ 0.39
HOXA6-202ENST00000521478 RILPL2Q969X0 211 aa17.49■□□□□ 0.39
HOXA6-202ENST00000521478 ALDH8A1Q9H2A2 487 aaPredicted RBP17.49■□□□□ 0.39
HOXA6-202ENST00000521478 MSRAQ9UJ68 235 aa17.49■□□□□ 0.39
HOXA6-202ENST00000521478 PRUNE2Q8WUY3 3088 aa17.49■□□□□ 0.39
HOXA6-202ENST00000521478 MYO9BQ13459 2157 aa17.49■□□□□ 0.39
HOXA6-202ENST00000521478 WDR19Q8NEZ3 1342 aa17.48■□□□□ 0.39
HOXA6-202ENST00000521478 SDSP20132 328 aa17.48■□□□□ 0.39
HOXA6-202ENST00000521478 MFAP1P55081 439 aaKnown RBP17.48■□□□□ 0.39
HOXA6-202ENST00000521478 RPS6P62753 249 aaKnown RBP17.48■□□□□ 0.39
HOXA6-202ENST00000521478 PURAQ00577 322 aaKnown RBP17.48■□□□□ 0.39
HOXA6-202ENST00000521478 AAMPQ13685 434 aa17.48■□□□□ 0.39
HOXA6-202ENST00000521478 RAB30Q15771 203 aa17.48■□□□□ 0.39
HOXA6-202ENST00000521478 SMC5Q8IY18 1101 aa17.48■□□□□ 0.39
HOXA6-202ENST00000521478 RPUSD2Q8IZ73 545 aaKnown RBP17.48■□□□□ 0.39
HOXA6-202ENST00000521478 USP38Q8NB14 1042 aa17.48■□□□□ 0.39
HOXA6-202ENST00000521478 WNT8AQ9H1J5 351 aa17.48■□□□□ 0.39
HOXA6-202ENST00000521478 RNF41Q9H4P4 317 aaPredicted RBP17.48■□□□□ 0.39
HOXA6-202ENST00000521478 SUPT20HL2P0C7V6 817 aa17.47■□□□□ 0.39
HOXA6-202ENST00000521478 EDNRBP24530 442 aa17.47■□□□□ 0.39
HOXA6-202ENST00000521478 CPT1AP50416 773 aa17.47■□□□□ 0.39
HOXA6-202ENST00000521478 PDE4DQ08499 809 aa17.47■□□□□ 0.39
HOXA6-202ENST00000521478 OTOP2Q7RTS6 562 aa17.47■□□□□ 0.39
HOXA6-202ENST00000521478 DGKHQ86XP1 1220 aa17.47■□□□□ 0.39
HOXA6-202ENST00000521478 RGS22Q8NE09 1264 aa17.47■□□□□ 0.39
HOXA6-202ENST00000521478 DNERQ8NFT8 737 aa17.47■□□□□ 0.39
HOXA6-202ENST00000521478 ESR2Q92731 530 aa17.47■□□□□ 0.39
HOXA6-202ENST00000521478 GAS2L1Q99501 681 aaPredicted RBP17.47■□□□□ 0.39
HOXA6-202ENST00000521478 MPHOSPH6Q99547 160 aaKnown RBP17.47■□□□□ 0.39
HOXA6-202ENST00000521478 PRDM12Q9H4Q4 367 aa17.47■□□□□ 0.39
HOXA6-202ENST00000521478 NKRFO15226 690 aaKnown RBP eCLIP17.46■□□□□ 0.39
HOXA6-202ENST00000521478 MYL3P08590 195 aa17.46■□□□□ 0.39
HOXA6-202ENST00000521478 GPATCH4Q5T3I0 446 aaKnown RBP17.46■□□□□ 0.39
HOXA6-202ENST00000521478 OR6J1Q8NGC5 347 aa17.46■□□□□ 0.39
HOXA6-202ENST00000521478 SCFD2Q8WU76 684 aa17.46■□□□□ 0.39
HOXA6-202ENST00000521478 SYMPKQ92797 1274 aaKnown RBP17.46■□□□□ 0.39
HOXA6-202ENST00000521478 VWCEQ96DN2 955 aa17.46■□□□□ 0.39
HOXA6-202ENST00000521478 ZKSCAN3Q9BRR0 538 aa17.46■□□□□ 0.39
HOXA6-202ENST00000521478 MTG1Q9BT17 334 aaPredicted RBP17.46■□□□□ 0.39
HOXA6-202ENST00000521478 RWDD1Q9H446 243 aaPredicted RBP17.46■□□□□ 0.39
HOXA6-202ENST00000521478 OSBPL3Q9H4L5 887 aa17.46■□□□□ 0.39
HOXA6-202ENST00000521478 GPHNQ9NQX3 736 aaPredicted RBP17.46■□□□□ 0.39
HOXA6-202ENST00000521478 TRMT13Q9NUP7 481 aaKnown RBP17.46■□□□□ 0.39
HOXA6-202ENST00000521478 B4DLN1 442 aa17.45■□□□□ 0.38
HOXA6-202ENST00000521478 ZNF213O14771 459 aa17.45■□□□□ 0.38
HOXA6-202ENST00000521478 KPNA6O60684 536 aa17.45■□□□□ 0.38
HOXA6-202ENST00000521478 GOLGA8HP0CJ92 632 aa17.45■□□□□ 0.38
HOXA6-202ENST00000521478 NT5C2P49902 561 aa17.45■□□□□ 0.38
HOXA6-202ENST00000521478 MRPL12P52815 198 aaKnown RBP17.45■□□□□ 0.38
HOXA6-202ENST00000521478 BRDTQ58F21 947 aaPredicted RBP17.45■□□□□ 0.38
HOXA6-202ENST00000521478 CCDC178Q5BJE1 867 aa17.45■□□□□ 0.38
HOXA6-202ENST00000521478 B4GALNT3Q6L9W6 998 aa17.45■□□□□ 0.38
HOXA6-202ENST00000521478 PLEKHM2Q8IWE5 1019 aa17.45■□□□□ 0.38
HOXA6-202ENST00000521478 ANKS1AQ92625 1134 aa17.45■□□□□ 0.38
HOXA6-202ENST00000521478 SCLYQ96I15 445 aa17.45■□□□□ 0.38
HOXA6-202ENST00000521478 UBA5Q9GZZ9 404 aa17.45■□□□□ 0.38
HOXA6-202ENST00000521478 MAF1Q9H063 256 aa17.45■□□□□ 0.38
HOXA6-202ENST00000521478 NKX2-4Q9H2Z4 354 aa17.45■□□□□ 0.38
HOXA6-202ENST00000521478 YBX2Q9Y2T7 364 aaKnown RBP17.45■□□□□ 0.38
HOXA6-202ENST00000521478 SLC4A7Q9Y6M7 1214 aa17.45■□□□□ 0.38
HOXA6-202ENST00000521478 GBF1Q92538 1859 aa17.45■□□□□ 0.38
HOXA6-202ENST00000521478 TNKSO95271 1327 aa17.45■□□□□ 0.38
HOXA6-202ENST00000521478 NEDD4P46934 1319 aa17.45■□□□□ 0.38
HOXA6-202ENST00000521478 CDH23Q9H251 3354 aa17.45■□□□□ 0.38
HOXA6-202ENST00000521478 SCN10AQ9Y5Y9 1956 aa17.44■□□□□ 0.38
HOXA6-202ENST00000521478 CHD9Q3L8U1 2897 aa17.44■□□□□ 0.38
HOXA6-202ENST00000521478 A6NJR5 290 aa17.44■□□□□ 0.38
HOXA6-202ENST00000521478 CYP2C9P11712 490 aa17.44■□□□□ 0.38
HOXA6-202ENST00000521478 PPP2R5BQ15173 497 aa17.44■□□□□ 0.38
HOXA6-202ENST00000521478 NBPF20Q3BBV1 942 aa17.44■□□□□ 0.38
HOXA6-202ENST00000521478 CHD1LQ86WJ1 897 aa17.44■□□□□ 0.38
HOXA6-202ENST00000521478 CPVLQ9H3G5 476 aa17.44■□□□□ 0.38
HOXA6-202ENST00000521478 SLC28A3Q9HAS3 691 aa17.44■□□□□ 0.38
HOXA6-202ENST00000521478 RAD50Q92878 1312 aa17.44■□□□□ 0.38
HOXA6-202ENST00000521478 PFKMP08237 780 aa17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms