RNA–Protein interactions for RNA: ENST00000520957.1

CLK4-208, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best) BASIC

Gene CLK4, Length 1,690 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-208ENST00000520957 ADAMTS3O15072 1205 aa14.3□□□□□ -0.12
CLK4-208ENST00000520957 SLAIN1Q8ND83 568 aa14.3□□□□□ -0.12
CLK4-208ENST00000520957 SYTL5Q8TDW5 730 aaPredicted RBP14.3□□□□□ -0.12
CLK4-208ENST00000520957 PNMA2Q9UL42 364 aa14.3□□□□□ -0.12
CLK4-208ENST00000520957 CPLX1O14810 134 aa14.3□□□□□ -0.12
CLK4-208ENST00000520957 PRPF3O43395 683 aaKnown RBP14.3□□□□□ -0.12
CLK4-208ENST00000520957 CACNB2Q08289 660 aaPredicted RBP14.3□□□□□ -0.12
CLK4-208ENST00000520957 USP17L6PQ6QN14 398 aa14.3□□□□□ -0.12
CLK4-208ENST00000520957 RGS22Q8NE09 1264 aa14.3□□□□□ -0.12
CLK4-208ENST00000520957 TRPV1Q8NER1 839 aa14.3□□□□□ -0.12
CLK4-208ENST00000520957 GTF3C6Q969F1 213 aa14.3□□□□□ -0.12
CLK4-208ENST00000520957 ARMC5Q96C12 935 aa14.3□□□□□ -0.12
CLK4-208ENST00000520957 ZNF333Q96JL9 665 aa14.3□□□□□ -0.12
CLK4-208ENST00000520957 AIFM3Q96NN9 605 aa14.3□□□□□ -0.12
CLK4-208ENST00000520957 TAAR1Q96RJ0 339 aa14.3□□□□□ -0.12
CLK4-208ENST00000520957 PLXNB2O15031 1838 aa14.29□□□□□ -0.12
CLK4-208ENST00000520957 SNAI1O95863 264 aaPredicted RBP14.29□□□□□ -0.12
CLK4-208ENST00000520957 PFKFB3Q16875 520 aaPredicted RBP14.29□□□□□ -0.12
CLK4-208ENST00000520957 TINF2Q9BSI4 451 aa14.29□□□□□ -0.12
CLK4-208ENST00000520957 UNC93B1Q9H1C4 597 aa14.29□□□□□ -0.12
CLK4-208ENST00000520957 MGAMO43451 1857 aa14.29□□□□□ -0.12
CLK4-208ENST00000520957 MKI67P46013 3256 aaKnown RBP14.28□□□□□ -0.12
CLK4-208ENST00000520957 PFASO15067 1338 aa14.28□□□□□ -0.12
CLK4-208ENST00000520957 STXBP3O00186 592 aa14.28□□□□□ -0.12
CLK4-208ENST00000520957 JAK2O60674 1132 aa14.28□□□□□ -0.12
CLK4-208ENST00000520957 HMGCRP04035 888 aa14.28□□□□□ -0.12
CLK4-208ENST00000520957 SCG2P13521 617 aa14.28□□□□□ -0.12
CLK4-208ENST00000520957 PRKAR2AP13861 404 aaKnown RBP14.28□□□□□ -0.12
CLK4-208ENST00000520957 CCND3P30281 292 aaPredicted RBP14.28□□□□□ -0.12
CLK4-208ENST00000520957 OLFML2BQ68BL8 750 aa14.28□□□□□ -0.12
CLK4-208ENST00000520957 MCF2L2Q86YR7 1114 aa14.28□□□□□ -0.12
CLK4-208ENST00000520957 CCDC83Q8IWF9 413 aa14.28□□□□□ -0.12
CLK4-208ENST00000520957 RNF26Q9BY78 433 aaPredicted RBP14.28□□□□□ -0.12
CLK4-208ENST00000520957 GJB4Q9NTQ9 266 aa14.28□□□□□ -0.12
CLK4-208ENST00000520957 BARHL2Q9NY43 387 aa14.28□□□□□ -0.12
CLK4-208ENST00000520957 SLC5A4Q9NY91 659 aa14.28□□□□□ -0.12
CLK4-208ENST00000520957 DIS3Q9Y2L1 958 aaKnown RBP14.28□□□□□ -0.12
CLK4-208ENST00000520957 MEIS2O14770 477 aa14.27□□□□□ -0.12
CLK4-208ENST00000520957 FDPSP14324 419 aaKnown RBP14.27□□□□□ -0.12
CLK4-208ENST00000520957 HSD17B4P51659 736 aa14.27□□□□□ -0.12
CLK4-208ENST00000520957 SSRP1Q08945 709 aaKnown RBP14.27□□□□□ -0.12
CLK4-208ENST00000520957 UBE2SQ16763 222 aa14.27□□□□□ -0.12
CLK4-208ENST00000520957 MAP3K21Q5TCX8 1036 aa14.27□□□□□ -0.12
CLK4-208ENST00000520957 FCHSD1Q86WN1 690 aa14.27□□□□□ -0.12
CLK4-208ENST00000520957 ZFP91Q96JP5 570 aaPredicted RBP14.27□□□□□ -0.12
CLK4-208ENST00000520957 PSTPIP2Q9H939 334 aa14.27□□□□□ -0.12
CLK4-208ENST00000520957 CCDC85CA6NKD9 419 aa14.26□□□□□ -0.13
CLK4-208ENST00000520957 GCOM1H8Y6P7 765 aaPredicted RBP14.26□□□□□ -0.13
CLK4-208ENST00000520957 ST18O60284 1047 aa14.26□□□□□ -0.13
CLK4-208ENST00000520957 POLR2MP0CAP2 368 aa14.26□□□□□ -0.13
CLK4-208ENST00000520957 CCL5P13501 91 aa14.26□□□□□ -0.13
CLK4-208ENST00000520957 NAPAP54920 295 aa14.26□□□□□ -0.13
CLK4-208ENST00000520957 UBXN2AP68543 259 aa14.26□□□□□ -0.13
CLK4-208ENST00000520957 AKAP17AQ02040 695 aaKnown RBP14.26□□□□□ -0.13
CLK4-208ENST00000520957 MFSD14CQ5VZR4 134 aa14.26□□□□□ -0.13
CLK4-208ENST00000520957 MAMDC4Q6UXC1 1216 aa14.26□□□□□ -0.13
CLK4-208ENST00000520957 EEPD1Q7L9B9 569 aa14.26□□□□□ -0.13
CLK4-208ENST00000520957 VPS54Q9P1Q0 977 aa14.26□□□□□ -0.13
CLK4-208ENST00000520957 ALDH5A1P51649 535 aaPredicted RBP14.26□□□□□ -0.13
CLK4-208ENST00000520957 GHRHRQ02643 423 aa14.26□□□□□ -0.13
CLK4-208ENST00000520957 TMEM63BQ5T3F8 832 aa14.26□□□□□ -0.13
CLK4-208ENST00000520957 ANO1Q5XXA6 986 aa14.26□□□□□ -0.13
CLK4-208ENST00000520957 ARMCX2Q7L311 632 aa14.26□□□□□ -0.13
CLK4-208ENST00000520957 TRMT44Q8IYL2 757 aaKnown RBP14.26□□□□□ -0.13
CLK4-208ENST00000520957 NSUN7Q8NE18 718 aaKnown RBP14.26□□□□□ -0.13
CLK4-208ENST00000520957 TMX3Q96JJ7 454 aa14.26□□□□□ -0.13
CLK4-208ENST00000520957 RMDN3Q96TC7 470 aa14.26□□□□□ -0.13
CLK4-208ENST00000520957 RNF208Q9H0X6 261 aa14.26□□□□□ -0.13
CLK4-208ENST00000520957 CDKN2AIPQ9NXV6 580 aaPredicted RBP14.26□□□□□ -0.13
CLK4-208ENST00000520957 SMCO2A6NFE2 343 aa14.25□□□□□ -0.13
CLK4-208ENST00000520957 EIF2AK2P19525 551 aaKnown RBP14.25□□□□□ -0.13
CLK4-208ENST00000520957 PTGS1P23219 599 aa14.25□□□□□ -0.13
CLK4-208ENST00000520957 TRAF1Q13077 416 aa14.25□□□□□ -0.13
CLK4-208ENST00000520957 CPLX2Q6PUV4 134 aaKnown RBP14.25□□□□□ -0.13
CLK4-208ENST00000520957 ZNF467Q7Z7K2 595 aaPredicted RBP14.25□□□□□ -0.13
CLK4-208ENST00000520957 TRIM22Q8IYM9 498 aa14.25□□□□□ -0.13
CLK4-208ENST00000520957 ZSCAN31Q96LW9 406 aaPredicted RBP14.25□□□□□ -0.13
CLK4-208ENST00000520957 KATNBL1Q9H079 304 aa14.25□□□□□ -0.13
CLK4-208ENST00000520957 PDGFCQ9NRA1 345 aa14.25□□□□□ -0.13
CLK4-208ENST00000520957 POTEFA5A3E0 1075 aa14.24□□□□□ -0.13
CLK4-208ENST00000520957 DEXIO95424 95 aa14.24□□□□□ -0.13
CLK4-208ENST00000520957 ZNF865P0CJ78 1059 aaPredicted RBP14.24□□□□□ -0.13
CLK4-208ENST00000520957 CYBAP13498 195 aa14.24□□□□□ -0.13
CLK4-208ENST00000520957 CNGA1P29973 690 aa14.24□□□□□ -0.13
CLK4-208ENST00000520957 IL31RAQ8NI17 732 aa14.24□□□□□ -0.13
CLK4-208ENST00000520957 TMEM260Q9NX78 707 aa14.24□□□□□ -0.13
CLK4-208ENST00000520957 ORC3Q9UBD5 711 aaPredicted RBP14.24□□□□□ -0.13
CLK4-208ENST00000520957 RPTORQ8N122 1335 aa14.24□□□□□ -0.13
CLK4-208ENST00000520957 CDKL5O76039 1030 aa14.23□□□□□ -0.13
CLK4-208ENST00000520957 ACVR2BQ13705 512 aa14.23□□□□□ -0.13
CLK4-208ENST00000520957 ARHGEF16Q5VV41 709 aa14.23□□□□□ -0.13
CLK4-208ENST00000520957 FBXO16Q8IX29 292 aaPredicted RBP14.23□□□□□ -0.13
CLK4-208ENST00000520957 SMARCC2Q8TAQ2 1214 aa14.23□□□□□ -0.13
CLK4-208ENST00000520957 LENG1Q96BZ8 264 aaPredicted RBP14.23□□□□□ -0.13
CLK4-208ENST00000520957 PGBD1Q96JS3 809 aa14.23□□□□□ -0.13
CLK4-208ENST00000520957 DEFB118Q96PH6 123 aa14.23□□□□□ -0.13
CLK4-208ENST00000520957 XRN2Q9H0D6 950 aaKnown RBP eCLIP14.23□□□□□ -0.13
CLK4-208ENST00000520957 HMX1Q9NP08 348 aaPredicted RBP14.23□□□□□ -0.13
CLK4-208ENST00000520957 RIC8AQ9NPQ8 531 aa14.23□□□□□ -0.13
CLK4-208ENST00000520957 PXMP2Q9NR77 195 aa14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms