RNA–Protein interactions for RNA: ENST00000520953.5

SREK1-209, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, humanhuman

TSL 5

Gene SREK1, Length 2,172 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREK1-209ENST00000520953 RCOR1Q9UKL0 485 aa17.19■□□□□ 0.34
SREK1-209ENST00000520953 FAM155AB1AL88 458 aaPredicted RBP17.18■□□□□ 0.34
SREK1-209ENST00000520953 RILPL1Q5EBL4 403 aa17.18■□□□□ 0.34
SREK1-209ENST00000520953 TTC38Q5R3I4 469 aa17.18■□□□□ 0.34
SREK1-209ENST00000520953 FAM177A1Q8N128 213 aaPredicted RBP17.18■□□□□ 0.34
SREK1-209ENST00000520953 TMEM87AQ8NBN3 555 aa17.18■□□□□ 0.34
SREK1-209ENST00000520953 BICD2Q8TD16 824 aa17.18■□□□□ 0.34
SREK1-209ENST00000520953 CFAP45Q9UL16 551 aa17.18■□□□□ 0.34
SREK1-209ENST00000520953 MRPL11Q9Y3B7 192 aaKnown RBP17.18■□□□□ 0.34
SREK1-209ENST00000520953 MYH7BA7E2Y1 1941 aa17.18■□□□□ 0.34
SREK1-209ENST00000520953 MYPNQ86TC9 1320 aa17.18■□□□□ 0.34
SREK1-209ENST00000520953 TMEM88BA6NKF7 163 aa17.18■□□□□ 0.34
SREK1-209ENST00000520953 MRE11P49959 708 aa17.18■□□□□ 0.34
SREK1-209ENST00000520953 NONOQ15233 471 aaKnown RBP eCLIP17.18■□□□□ 0.34
SREK1-209ENST00000520953 Q3C1V9 767 aa17.18■□□□□ 0.34
SREK1-209ENST00000520953 KRT25Q7Z3Z0 450 aa17.18■□□□□ 0.34
SREK1-209ENST00000520953 GRPEL1Q9HAV7 217 aa17.18■□□□□ 0.34
SREK1-209ENST00000520953 RNF146Q9NTX7 359 aa17.18■□□□□ 0.34
SREK1-209ENST00000520953 RBPJLQ9UBG7 517 aa17.18■□□□□ 0.34
SREK1-209ENST00000520953 MCM7P33993 719 aa17.17■□□□□ 0.34
SREK1-209ENST00000520953 STAT3P40763 770 aa17.17■□□□□ 0.34
SREK1-209ENST00000520953 UBXN2AP68543 259 aa17.17■□□□□ 0.34
SREK1-209ENST00000520953 GRIN1Q05586 938 aa17.17■□□□□ 0.34
SREK1-209ENST00000520953 STK38Q15208 465 aa17.17■□□□□ 0.34
SREK1-209ENST00000520953 LETM2Q2VYF4 491 aa17.17■□□□□ 0.34
SREK1-209ENST00000520953 SLC30A10Q6XR72 485 aa17.17■□□□□ 0.34
SREK1-209ENST00000520953 ANO3Q9BYT9 981 aa17.17■□□□□ 0.34
SREK1-209ENST00000520953 PANK2Q9BZ23 570 aa17.17■□□□□ 0.34
SREK1-209ENST00000520953 SCAND2PQ9GZW5 306 aaPredicted RBP17.17■□□□□ 0.34
SREK1-209ENST00000520953 EIF4ENIF1Q9NRA8 985 aaKnown RBP17.17■□□□□ 0.34
SREK1-209ENST00000520953 IGF2BP3O00425 579 aaKnown RBP eCLIP17.16■□□□□ 0.34
SREK1-209ENST00000520953 SLC10A3P09131 477 aa17.16■□□□□ 0.34
SREK1-209ENST00000520953 CAVIN1Q6NZI2 390 aaKnown RBP17.16■□□□□ 0.34
SREK1-209ENST00000520953 ZFP91Q96JP5 570 aaPredicted RBP17.16■□□□□ 0.34
SREK1-209ENST00000520953 TEX13BQ9BXU2 312 aa17.16■□□□□ 0.34
SREK1-209ENST00000520953 TDP2O95551 362 aa17.16■□□□□ 0.34
SREK1-209ENST00000520953 SLC39A14Q15043 492 aa17.16■□□□□ 0.34
SREK1-209ENST00000520953 CYP4F22Q6NT55 531 aa17.16■□□□□ 0.34
SREK1-209ENST00000520953 UIMC1Q96RL1 719 aa17.16■□□□□ 0.34
SREK1-209ENST00000520953 NOL7Q9UMY1 257 aaKnown RBP17.16■□□□□ 0.34
SREK1-209ENST00000520953 GCOM1H8Y6P7 765 aaPredicted RBP17.15■□□□□ 0.34
SREK1-209ENST00000520953 PIK3CDO00329 1044 aa17.15■□□□□ 0.34
SREK1-209ENST00000520953 ATP2A1O14983 1001 aa17.15■□□□□ 0.34
SREK1-209ENST00000520953 SPTLC2O15270 562 aa17.15■□□□□ 0.34
SREK1-209ENST00000520953 POLR2MP0CAP2 368 aa17.15■□□□□ 0.34
SREK1-209ENST00000520953 FDX1P10109 184 aa17.15■□□□□ 0.34
SREK1-209ENST00000520953 OSBPP22059 807 aa17.15■□□□□ 0.34
SREK1-209ENST00000520953 NSMFQ6X4W1 530 aa17.15■□□□□ 0.34
SREK1-209ENST00000520953 PAXIP1Q6ZW49 1069 aaPredicted RBP17.15■□□□□ 0.34
SREK1-209ENST00000520953 CLIC6Q96NY7 704 aa17.15■□□□□ 0.34
SREK1-209ENST00000520953 SPATC1LQ9H0A9 340 aa17.15■□□□□ 0.34
SREK1-209ENST00000520953 TMEM60Q9H2L4 133 aa17.15■□□□□ 0.34
SREK1-209ENST00000520953 PCDHA7Q9UN72 937 aa17.15■□□□□ 0.34
SREK1-209ENST00000520953 ME1P48163 572 aa17.15■□□□□ 0.34
SREK1-209ENST00000520953 OAZ1P54368 228 aa17.15■□□□□ 0.34
SREK1-209ENST00000520953 HTRA3P83110 453 aa17.15■□□□□ 0.34
SREK1-209ENST00000520953 ATL3Q6DD88 541 aa17.15■□□□□ 0.34
SREK1-209ENST00000520953 ANKRD23Q86SG2 305 aa17.15■□□□□ 0.34
SREK1-209ENST00000520953 ELP1O95163 1332 aa17.14■□□□□ 0.33
SREK1-209ENST00000520953 CCNT1O60563 726 aaKnown RBP17.14■□□□□ 0.33
SREK1-209ENST00000520953 YEATS4O95619 227 aa17.14■□□□□ 0.33
SREK1-209ENST00000520953 HSD17B4P51659 736 aa17.14■□□□□ 0.33
SREK1-209ENST00000520953 RPS6P62753 249 aaKnown RBP17.14■□□□□ 0.33
SREK1-209ENST00000520953 NEK8Q86SG6 692 aa17.14■□□□□ 0.33
SREK1-209ENST00000520953 MOV10L1Q9BXT6 1211 aaKnown RBP17.14■□□□□ 0.33
SREK1-209ENST00000520953 RBBP6Q7Z6E9 1792 aaKnown RBP17.14■□□□□ 0.33
SREK1-209ENST00000520953 SLC37A4O43826 429 aa17.13■□□□□ 0.33
SREK1-209ENST00000520953 FSTL1Q12841 308 aa17.13■□□□□ 0.33
SREK1-209ENST00000520953 PTGDRQ13258 359 aa17.13■□□□□ 0.33
SREK1-209ENST00000520953 PABPC4Q13310 644 aaKnown RBP eCLIP17.13■□□□□ 0.33
SREK1-209ENST00000520953 BAATQ14032 418 aaPredicted RBP17.13■□□□□ 0.33
SREK1-209ENST00000520953 ZSCAN23Q3MJ62 389 aa17.13■□□□□ 0.33
SREK1-209ENST00000520953 C4orf32Q8N8J7 132 aa17.13■□□□□ 0.33
SREK1-209ENST00000520953 SYTL5Q8TDW5 730 aaPredicted RBP17.13■□□□□ 0.33
SREK1-209ENST00000520953 CRYGNQ8WXF5 182 aa17.13■□□□□ 0.33
SREK1-209ENST00000520953 GJA10Q969M2 543 aa17.13■□□□□ 0.33
SREK1-209ENST00000520953 TESPA1A2RU30 521 aaPredicted RBP17.13■□□□□ 0.33
SREK1-209ENST00000520953 SPDYE3A6NKU9 549 aa17.13■□□□□ 0.33
SREK1-209ENST00000520953 TRAPPC10P48553 1259 aa17.13■□□□□ 0.33
SREK1-209ENST00000520953 TRAF1Q13077 416 aa17.13■□□□□ 0.33
SREK1-209ENST00000520953 IL17AQ16552 155 aa17.13■□□□□ 0.33
SREK1-209ENST00000520953 SPECC1Q5M775 1068 aa17.13■□□□□ 0.33
SREK1-209ENST00000520953 AXDND1Q5T1B0 1012 aaPredicted RBP17.13■□□□□ 0.33
SREK1-209ENST00000520953 ANKRD13CQ8N6S4 541 aa17.13■□□□□ 0.33
SREK1-209ENST00000520953 IL31RAQ8NI17 732 aa17.13■□□□□ 0.33
SREK1-209ENST00000520953 SMCR8Q8TEV9 937 aaPredicted RBP17.13■□□□□ 0.33
SREK1-209ENST00000520953 ZNF445P59923 1031 aa17.12■□□□□ 0.33
SREK1-209ENST00000520953 AP3B2Q13367 1082 aa17.12■□□□□ 0.33
SREK1-209ENST00000520953 NCAPG2Q86XI2 1143 aa17.12■□□□□ 0.33
SREK1-209ENST00000520953 POTEDQ86YR6 584 aa17.12■□□□□ 0.33
SREK1-209ENST00000520953 CYP2W1Q8TAV3 490 aa17.12■□□□□ 0.33
SREK1-209ENST00000520953 TAAR1Q96RJ0 339 aa17.12■□□□□ 0.33
SREK1-209ENST00000520953 GLT8D2Q9H1C3 349 aa17.12■□□□□ 0.33
SREK1-209ENST00000520953 PORCNQ9H237 461 aa17.12■□□□□ 0.33
SREK1-209ENST00000520953 A1CFQ9NQ94 594 aaKnown RBP17.12■□□□□ 0.33
SREK1-209ENST00000520953 FBXO2Q9UK22 296 aaPredicted RBP17.12■□□□□ 0.33
SREK1-209ENST00000520953 LCTP09848 1927 aa17.12■□□□□ 0.33
SREK1-209ENST00000520953 AOC2O75106 756 aa17.12■□□□□ 0.33
SREK1-209ENST00000520953 ECM2O94769 699 aaPredicted RBP17.12■□□□□ 0.33
SREK1-209ENST00000520953 LIG1P18858 919 aa17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms