RNA–Protein interactions for RNA: ENST00000520917.1

PTK2-226, Transcript of protein tyrosine kinase 2, humanhuman

TSL 4

Gene PTK2, Length 653 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTK2-226ENST00000520917 C16orf86Q6ZW13 317 aa15.98■□□□□ 0.15
PTK2-226ENST00000520917 RNF135Q8IUD6 432 aa15.98■□□□□ 0.15
PTK2-226ENST00000520917 STK11IPQ8N1F8 1099 aa15.98■□□□□ 0.15
PTK2-226ENST00000520917 CHST13Q8NET6 341 aa15.98■□□□□ 0.15
PTK2-226ENST00000520917 CTDP1Q9Y5B0 961 aaPredicted RBP15.98■□□□□ 0.15
PTK2-226ENST00000520917 VPS13AQ96RL7 3174 aa15.97■□□□□ 0.15
PTK2-226ENST00000520917 F5H6K3 240 aa15.97■□□□□ 0.15
PTK2-226ENST00000520917 SURF6O75683 361 aaKnown RBP15.97■□□□□ 0.15
PTK2-226ENST00000520917 VCPP55072 806 aaKnown RBP15.97■□□□□ 0.15
PTK2-226ENST00000520917 CHMP4BP1P59074 171 aa15.97■□□□□ 0.15
PTK2-226ENST00000520917 KLRC3Q07444 240 aa15.97■□□□□ 0.15
PTK2-226ENST00000520917 C12orf60Q5U649 245 aa15.97■□□□□ 0.15
PTK2-226ENST00000520917 KIAA1211Q6ZU35 1233 aa15.97■□□□□ 0.15
PTK2-226ENST00000520917 CHMP4CQ96CF2 233 aa15.97■□□□□ 0.15
PTK2-226ENST00000520917 MRPL38Q96DV4 380 aaKnown RBP15.97■□□□□ 0.15
PTK2-226ENST00000520917 CTAGE1Q96RT6 745 aa15.97■□□□□ 0.15
PTK2-226ENST00000520917 RAD9AQ99638 391 aa15.97■□□□□ 0.15
PTK2-226ENST00000520917 PRKAG3Q9UGI9 489 aa15.97■□□□□ 0.15
PTK2-226ENST00000520917 FBXO40Q9UH90 709 aa15.97■□□□□ 0.15
PTK2-226ENST00000520917 RALGAPA2Q2PPJ7 1873 aa15.97■□□□□ 0.15
PTK2-226ENST00000520917 TMEM221A6NGB7 291 aa15.96■□□□□ 0.15
PTK2-226ENST00000520917 ASB14A6NK59 587 aa15.96■□□□□ 0.15
PTK2-226ENST00000520917 USP17L12C9JPN9 530 aa15.96■□□□□ 0.15
PTK2-226ENST00000520917 USP17L21D6R901 530 aa15.96■□□□□ 0.15
PTK2-226ENST00000520917 M0R296 226 aa15.96■□□□□ 0.15
PTK2-226ENST00000520917 LTBRP36941 435 aa15.96■□□□□ 0.15
PTK2-226ENST00000520917 DLX2Q07687 328 aaPredicted RBP15.96■□□□□ 0.15
PTK2-226ENST00000520917 IQSEC1Q6DN90 963 aa15.96■□□□□ 0.15
PTK2-226ENST00000520917 PBXIP1Q96AQ6 731 aa15.96■□□□□ 0.15
PTK2-226ENST00000520917 PABPC5Q96DU9 382 aaKnown RBP15.96■□□□□ 0.15
PTK2-226ENST00000520917 C1orf115Q9H7X2 142 aa15.96■□□□□ 0.15
PTK2-226ENST00000520917 ACAD9Q9H845 621 aa15.96■□□□□ 0.15
PTK2-226ENST00000520917 RNF146Q9NTX7 359 aa15.96■□□□□ 0.15
PTK2-226ENST00000520917 CLDND1Q9NY35 253 aa15.96■□□□□ 0.15
PTK2-226ENST00000520917 COG6Q9Y2V7 657 aa15.96■□□□□ 0.15
PTK2-226ENST00000520917 NBNO60934 754 aa15.95■□□□□ 0.14
PTK2-226ENST00000520917 MBD4O95243 580 aa15.95■□□□□ 0.14
PTK2-226ENST00000520917 SNAP25P60880 206 aa15.95■□□□□ 0.14
PTK2-226ENST00000520917 ASCL5Q7RTU5 278 aa15.95■□□□□ 0.14
PTK2-226ENST00000520917 RPAINQ86UA6 219 aa15.95■□□□□ 0.14
PTK2-226ENST00000520917 BANK1Q8NDB2 785 aa15.95■□□□□ 0.14
PTK2-226ENST00000520917 DHX38Q92620 1227 aaKnown RBP15.95■□□□□ 0.14
PTK2-226ENST00000520917 EDAQ92838 391 aa15.95■□□□□ 0.14
PTK2-226ENST00000520917 CRBNQ96SW2 442 aa15.95■□□□□ 0.14
PTK2-226ENST00000520917 MTG1Q9BT17 334 aaPredicted RBP15.95■□□□□ 0.14
PTK2-226ENST00000520917 POLR3EQ9NVU0 708 aa15.95■□□□□ 0.14
PTK2-226ENST00000520917 Q9Y3F1 56 aa15.95■□□□□ 0.14
PTK2-226ENST00000520917 BFSP2Q13515 415 aa15.94■□□□□ 0.14
PTK2-226ENST00000520917 DUSP28Q4G0W2 176 aa15.94■□□□□ 0.14
PTK2-226ENST00000520917 MUM1L1Q5H9M0 696 aa15.94■□□□□ 0.14
PTK2-226ENST00000520917 LIN28BQ6ZN17 250 aaKnown RBP eCLIP15.94■□□□□ 0.14
PTK2-226ENST00000520917 OR6J1Q8NGC5 347 aa15.94■□□□□ 0.14
PTK2-226ENST00000520917 COPS5Q92905 334 aa15.94■□□□□ 0.14
PTK2-226ENST00000520917 UPF3BQ9BZI7 483 aaKnown RBP15.94■□□□□ 0.14
PTK2-226ENST00000520917 FAM186AA6NE01 2351 aa15.94■□□□□ 0.14
PTK2-226ENST00000520917 CACNA1BQ00975 2339 aa15.93■□□□□ 0.14
PTK2-226ENST00000520917 ZNF316A6NFI3 1004 aaPredicted RBP15.93■□□□□ 0.14
PTK2-226ENST00000520917 COL19A1Q14993 1142 aa15.93■□□□□ 0.14
PTK2-226ENST00000520917 CNKSR3Q6P9H4 555 aa15.93■□□□□ 0.14
PTK2-226ENST00000520917 TRIM67Q6ZTA4 783 aa15.93■□□□□ 0.14
PTK2-226ENST00000520917 BMP8AQ7Z5Y6 402 aa15.93■□□□□ 0.14
PTK2-226ENST00000520917 LRRC47Q8N1G4 583 aaKnown RBP15.93■□□□□ 0.14
PTK2-226ENST00000520917 SSH3Q8TE77 659 aa15.93■□□□□ 0.14
PTK2-226ENST00000520917 ATOH1Q92858 354 aaPredicted RBP15.93■□□□□ 0.14
PTK2-226ENST00000520917 NOD1Q9Y239 953 aa15.93■□□□□ 0.14
PTK2-226ENST00000520917 RIF1Q5UIP0 2472 aaKnown RBP15.93■□□□□ 0.14
PTK2-226ENST00000520917 MBTPS2O43462 519 aa15.92■□□□□ 0.14
PTK2-226ENST00000520917 ALAS1P13196 640 aa15.92■□□□□ 0.14
PTK2-226ENST00000520917 RASA1P20936 1047 aa15.92■□□□□ 0.14
PTK2-226ENST00000520917 SMAD2Q15796 467 aaKnown RBP15.92■□□□□ 0.14
PTK2-226ENST00000520917 PTGISQ16647 500 aa15.92■□□□□ 0.14
PTK2-226ENST00000520917 EPC2Q52LR7 807 aa15.92■□□□□ 0.14
PTK2-226ENST00000520917 TIGD5Q53EQ6 642 aa15.92■□□□□ 0.14
PTK2-226ENST00000520917 GDF6Q6KF10 455 aaPredicted RBP15.92■□□□□ 0.14
PTK2-226ENST00000520917 NFRKBQ6P4R8 1299 aa15.92■□□□□ 0.14
PTK2-226ENST00000520917 LRRC8DQ7L1W4 858 aa15.92■□□□□ 0.14
PTK2-226ENST00000520917 SUGP1Q8IWZ8 645 aaKnown RBP15.92■□□□□ 0.14
PTK2-226ENST00000520917 WDR11Q9BZH6 1224 aa15.92■□□□□ 0.14
PTK2-226ENST00000520917 VTA1Q9NP79 307 aa15.92■□□□□ 0.14
PTK2-226ENST00000520917 CLIP2Q9UDT6 1046 aa15.92■□□□□ 0.14
PTK2-226ENST00000520917 FAM50BQ9Y247 325 aa15.92■□□□□ 0.14
PTK2-226ENST00000520917 H0Y858 1186 aa15.91■□□□□ 0.14
PTK2-226ENST00000520917 GOLIM4O00461 696 aa15.91■□□□□ 0.14
PTK2-226ENST00000520917 KRT37O76014 449 aa15.91■□□□□ 0.14
PTK2-226ENST00000520917 CSPG5O95196 566 aa15.91■□□□□ 0.14
PTK2-226ENST00000520917 GTF2F1P35269 517 aaKnown RBP eCLIP15.91■□□□□ 0.14
PTK2-226ENST00000520917 OAZ1P54368 228 aa15.91■□□□□ 0.14
PTK2-226ENST00000520917 CTR9Q6PD62 1173 aa15.91■□□□□ 0.14
PTK2-226ENST00000520917 AACSQ86V21 672 aa15.91■□□□□ 0.14
PTK2-226ENST00000520917 FBXL6Q8N531 539 aa15.91■□□□□ 0.14
PTK2-226ENST00000520917 CLUAP1Q96AJ1 413 aa15.91■□□□□ 0.14
PTK2-226ENST00000520917 TRERF1Q96PN7 1200 aa15.91■□□□□ 0.14
PTK2-226ENST00000520917 DNAJC2Q99543 621 aaKnown RBP15.91■□□□□ 0.14
PTK2-226ENST00000520917 GPHNQ9NQX3 736 aaPredicted RBP15.91■□□□□ 0.14
PTK2-226ENST00000520917 TLR9Q9NR96 1032 aa15.91■□□□□ 0.14
PTK2-226ENST00000520917 ATP8A2Q9NTI2 1148 aa15.91■□□□□ 0.14
PTK2-226ENST00000520917 CYP39A1Q9NYL5 469 aa15.91■□□□□ 0.14
PTK2-226ENST00000520917 NYAP2Q9P242 653 aa15.91■□□□□ 0.14
PTK2-226ENST00000520917 FEM1BQ9UK73 627 aa15.91■□□□□ 0.14
PTK2-226ENST00000520917 TBX10O75333 385 aa15.9■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms