RNA–Protein interactions for RNA: ENST00000520913.1

PVT1-209, Transcript of Pvt1 oncogene, humanhuman

TSL 2

Gene PVT1, Length 584 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-209ENST00000520913 MAF1Q9H063 256 aa12.55□□□□□ -0.4
PVT1-209ENST00000520913 AP5M1Q9H0R1 490 aa12.55□□□□□ -0.4
PVT1-209ENST00000520913 CPVLQ9H3G5 476 aa12.55□□□□□ -0.4
PVT1-209ENST00000520913 DDX49Q9Y6V7 483 aaKnown RBP12.55□□□□□ -0.4
PVT1-209ENST00000520913 U3KPZ7 1027 aaPredicted RBP12.55□□□□□ -0.4
PVT1-209ENST00000520913 B4DLN1 442 aa12.54□□□□□ -0.4
PVT1-209ENST00000520913 CTAGE5O15320 804 aa12.54□□□□□ -0.4
PVT1-209ENST00000520913 TLR3O15455 904 aaKnown RBP12.54□□□□□ -0.4
PVT1-209ENST00000520913 SGSM2O43147 1006 aa12.54□□□□□ -0.4
PVT1-209ENST00000520913 DHX16O60231 1041 aaKnown RBP12.54□□□□□ -0.4
PVT1-209ENST00000520913 ZEB2O60315 1214 aa12.54□□□□□ -0.4
PVT1-209ENST00000520913 CYP21A2P08686 494 aa12.54□□□□□ -0.4
PVT1-209ENST00000520913 SMPD1P17405 629 aa12.54□□□□□ -0.4
PVT1-209ENST00000520913 MRPL12P52815 198 aaKnown RBP12.54□□□□□ -0.4
PVT1-209ENST00000520913 BEX3Q00994 111 aa12.54□□□□□ -0.4
PVT1-209ENST00000520913 FAAP100Q0VG06 881 aa12.54□□□□□ -0.4
PVT1-209ENST00000520913 FSCN1Q16658 493 aaKnown RBP12.54□□□□□ -0.4
PVT1-209ENST00000520913 RALYLQ86SE5 291 aaKnown RBP12.54□□□□□ -0.4
PVT1-209ENST00000520913 ADGRF4Q8IZF3 695 aa12.54□□□□□ -0.4
PVT1-209ENST00000520913 VTI1AQ96AJ9 217 aa12.54□□□□□ -0.4
PVT1-209ENST00000520913 UBA5Q9GZZ9 404 aa12.54□□□□□ -0.4
PVT1-209ENST00000520913 PDGFCQ9NRA1 345 aa12.54□□□□□ -0.4
PVT1-209ENST00000520913 TMEM39AQ9NV64 488 aa12.54□□□□□ -0.4
PVT1-209ENST00000520913 Q9Y3F1 56 aa12.54□□□□□ -0.4
PVT1-209ENST00000520913 BAZ2BQ9UIF8 2168 aaKnown RBP12.54□□□□□ -0.4
PVT1-209ENST00000520913 EYSQ5T1H1 3165 aa12.53□□□□□ -0.4
PVT1-209ENST00000520913 ERICH2A1L162 156 aa12.53□□□□□ -0.4
PVT1-209ENST00000520913 ARVCFO00192 962 aa12.53□□□□□ -0.4
PVT1-209ENST00000520913 CABYRO75952 493 aa12.53□□□□□ -0.4
PVT1-209ENST00000520913 EDNRBP24530 442 aa12.53□□□□□ -0.4
PVT1-209ENST00000520913 PTH1RQ03431 593 aa12.53□□□□□ -0.4
PVT1-209ENST00000520913 FPGSQ05932 587 aa12.53□□□□□ -0.4
PVT1-209ENST00000520913 PDE4DQ08499 809 aa12.53□□□□□ -0.4
PVT1-209ENST00000520913 SART3Q15020 963 aaKnown RBP12.53□□□□□ -0.4
PVT1-209ENST00000520913 SEC23AQ15436 765 aa12.53□□□□□ -0.4
PVT1-209ENST00000520913 QRICH1Q2TAL8 776 aa12.53□□□□□ -0.4
PVT1-209ENST00000520913 DUSP28Q4G0W2 176 aa12.53□□□□□ -0.4
PVT1-209ENST00000520913 KIAA1211Q6ZU35 1233 aa12.53□□□□□ -0.4
PVT1-209ENST00000520913 CYB5R4Q7L1T6 521 aa12.53□□□□□ -0.4
PVT1-209ENST00000520913 RGS22Q8NE09 1264 aa12.53□□□□□ -0.4
PVT1-209ENST00000520913 TBX21Q9UL17 535 aa12.53□□□□□ -0.4
PVT1-209ENST00000520913 CDH23Q9H251 3354 aa12.53□□□□□ -0.4
PVT1-209ENST00000520913 DOCK5Q9H7D0 1870 aa12.53□□□□□ -0.4
PVT1-209ENST00000520913 RBM47A0AV96 593 aaKnown RBP12.52□□□□□ -0.41
PVT1-209ENST00000520913 E7EWF7 191 aa12.52□□□□□ -0.41
PVT1-209ENST00000520913 DYNC1LI2O43237 492 aaPredicted RBP12.52□□□□□ -0.41
PVT1-209ENST00000520913 ITGB8P26012 769 aa12.52□□□□□ -0.41
PVT1-209ENST00000520913 CDK7P50613 346 aa12.52□□□□□ -0.41
PVT1-209ENST00000520913 PPP2R5BQ15173 497 aa12.52□□□□□ -0.41
PVT1-209ENST00000520913 FBXO11Q86XK2 927 aa12.52□□□□□ -0.41
PVT1-209ENST00000520913 FAM126BQ8IXS8 530 aa12.52□□□□□ -0.41
PVT1-209ENST00000520913 DEFB123Q8N688 67 aa12.52□□□□□ -0.41
PVT1-209ENST00000520913 NCOA7Q8NI08 942 aa12.52□□□□□ -0.41
PVT1-209ENST00000520913 SEZ6LQ9BYH1 1024 aa12.52□□□□□ -0.41
PVT1-209ENST00000520913 WDR11Q9BZH6 1224 aa12.52□□□□□ -0.41
PVT1-209ENST00000520913 SCN5AQ14524 2016 aa12.52□□□□□ -0.41
PVT1-209ENST00000520913 KLRF2D3W0D1 207 aa12.51□□□□□ -0.41
PVT1-209ENST00000520913 IFIT3O14879 490 aaKnown RBP12.51□□□□□ -0.41
PVT1-209ENST00000520913 NKRFO15226 690 aaKnown RBP eCLIP12.51□□□□□ -0.41
PVT1-209ENST00000520913 CPT1AP50416 773 aa12.51□□□□□ -0.41
PVT1-209ENST00000520913 WTAPQ15007 396 aa12.51□□□□□ -0.41
PVT1-209ENST00000520913 SHHQ15465 462 aa12.51□□□□□ -0.41
PVT1-209ENST00000520913 C9orf50Q5SZB4 431 aa12.51□□□□□ -0.41
PVT1-209ENST00000520913 CXCL17Q6UXB2 119 aa12.51□□□□□ -0.41
PVT1-209ENST00000520913 Q7L0L9 218 aa12.51□□□□□ -0.41
PVT1-209ENST00000520913 MCF2L2Q86YR7 1114 aa12.51□□□□□ -0.41
PVT1-209ENST00000520913 OR6J1Q8NGC5 347 aa12.51□□□□□ -0.41
PVT1-209ENST00000520913 SCFD2Q8WU76 684 aa12.51□□□□□ -0.41
PVT1-209ENST00000520913 JMJD4Q9H9V9 463 aa12.51□□□□□ -0.41
PVT1-209ENST00000520913 POLR3EQ9NVU0 708 aa12.51□□□□□ -0.41
PVT1-209ENST00000520913 MAD2L2Q9UI95 211 aa12.51□□□□□ -0.41
PVT1-209ENST00000520913 MRPL11Q9Y3B7 192 aaKnown RBP12.51□□□□□ -0.41
PVT1-209ENST00000520913 UNC80Q8N2C7 3258 aa12.51□□□□□ -0.41
PVT1-209ENST00000520913 TIMP1P01033 207 aa12.5□□□□□ -0.41
PVT1-209ENST00000520913 PTGS1P23219 599 aa12.5□□□□□ -0.41
PVT1-209ENST00000520913 ITGA7Q13683 1181 aa12.5□□□□□ -0.41
PVT1-209ENST00000520913 GRM4Q14833 912 aa12.5□□□□□ -0.41
PVT1-209ENST00000520913 BRDTQ58F21 947 aaPredicted RBP12.5□□□□□ -0.41
PVT1-209ENST00000520913 TMEM63BQ5T3F8 832 aa12.5□□□□□ -0.41
PVT1-209ENST00000520913 MFSD5Q6N075 450 aa12.5□□□□□ -0.41
PVT1-209ENST00000520913 STAG2Q8N3U4 1231 aa12.5□□□□□ -0.41
PVT1-209ENST00000520913 SLC43A3Q8NBI5 491 aa12.5□□□□□ -0.41
PVT1-209ENST00000520913 MAP4K1Q92918 833 aa12.5□□□□□ -0.41
PVT1-209ENST00000520913 RNPC3Q96LT9 517 aaKnown RBP12.5□□□□□ -0.41
PVT1-209ENST00000520913 AMNQ9BXJ7 453 aa12.5□□□□□ -0.41
PVT1-209ENST00000520913 RBM8AQ9Y5S9 174 aaKnown RBP12.5□□□□□ -0.41
PVT1-209ENST00000520913 PALM3A6NDB9 673 aaPredicted RBP12.49□□□□□ -0.41
PVT1-209ENST00000520913 ZBTB5O15062 677 aa12.49□□□□□ -0.41
PVT1-209ENST00000520913 CD4P01730 458 aa12.49□□□□□ -0.41
PVT1-209ENST00000520913 SMAD3P84022 425 aaKnown RBP12.49□□□□□ -0.41
PVT1-209ENST00000520913 TRAF1Q13077 416 aa12.49□□□□□ -0.41
PVT1-209ENST00000520913 PPIGQ13427 754 aaKnown RBP eCLIP12.49□□□□□ -0.413e-7■■□□□ 14.2
PVT1-209ENST00000520913 TTLL4Q14679 1199 aa12.49□□□□□ -0.41
PVT1-209ENST00000520913 ZNF697Q5TEC3 545 aa12.49□□□□□ -0.41
PVT1-209ENST00000520913 FAM109BQ6ICB4 259 aaPredicted RBP12.49□□□□□ -0.41
PVT1-209ENST00000520913 STOX1Q6ZVD7 989 aa12.49□□□□□ -0.41
PVT1-209ENST00000520913 CENPQQ7L2Z9 268 aaPredicted RBP12.49□□□□□ -0.41
PVT1-209ENST00000520913 MB21D2Q8IYB1 491 aaPredicted RBP12.49□□□□□ -0.41
PVT1-209ENST00000520913 SYTL5Q8TDW5 730 aaPredicted RBP12.49□□□□□ -0.41
PVT1-209ENST00000520913 NSUN6Q8TEA1 469 aaKnown RBP12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms