RNA–Protein interactions for RNA: ENST00000520909.5

CLK4-207, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 1,305 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-207ENST00000520909 CARFQ8N187 725 aa7.24□□□□□ -1.25
CLK4-207ENST00000520909 TMEM87AQ8NBN3 555 aa7.24□□□□□ -1.25
CLK4-207ENST00000520909 GIPC2Q8TF65 315 aa7.24□□□□□ -1.25
CLK4-207ENST00000520909 ZDHHC15Q96MV8 337 aa7.24□□□□□ -1.25
CLK4-207ENST00000520909 GLI4P10075 376 aa7.23□□□□□ -1.25
CLK4-207ENST00000520909 GUCY2CP25092 1073 aa7.23□□□□□ -1.25
CLK4-207ENST00000520909 DDX1Q92499 740 aaKnown RBP7.23□□□□□ -1.25
CLK4-207ENST00000520909 TSPAN17Q96FV3 270 aa7.23□□□□□ -1.25
CLK4-207ENST00000520909 NOBOXO60393 691 aa7.22□□□□□ -1.25
CLK4-207ENST00000520909 GJA9P57773 515 aa7.22□□□□□ -1.25
CLK4-207ENST00000520909 DLX2Q07687 328 aaPredicted RBP7.22□□□□□ -1.25
CLK4-207ENST00000520909 PPP2R5DQ14738 602 aa7.22□□□□□ -1.25
CLK4-207ENST00000520909 SLC9A5Q14940 896 aa7.22□□□□□ -1.25
CLK4-207ENST00000520909 ZYXQ15942 572 aaKnown RBP7.22□□□□□ -1.25
CLK4-207ENST00000520909 EEF1DP3Q658K8 133 aa7.22□□□□□ -1.25
CLK4-207ENST00000520909 RCSD1Q6JBY9 416 aa7.22□□□□□ -1.25
CLK4-207ENST00000520909 LZTR1Q8N653 840 aa7.22□□□□□ -1.25
CLK4-207ENST00000520909 RBBP8NLQ8NC74 664 aaPredicted RBP7.22□□□□□ -1.25
CLK4-207ENST00000520909 PEX11GQ96HA9 241 aa7.22□□□□□ -1.25
CLK4-207ENST00000520909 GZF1Q9H116 711 aaPredicted RBP7.22□□□□□ -1.25
CLK4-207ENST00000520909 NUDT5Q9UKK9 219 aa7.22□□□□□ -1.25
CLK4-207ENST00000520909 ZNF214Q9UL59 606 aaPredicted RBP7.22□□□□□ -1.25
CLK4-207ENST00000520909 PMLP29590 882 aa7.21□□□□□ -1.26
CLK4-207ENST00000520909 CNR2P34972 360 aa7.21□□□□□ -1.26
CLK4-207ENST00000520909 MAGEA10P43363 369 aaPredicted RBP7.21□□□□□ -1.26
CLK4-207ENST00000520909 TRIM26Q12899 539 aaPredicted RBP7.21□□□□□ -1.26
CLK4-207ENST00000520909 RXFP1Q9HBX9 757 aa7.21□□□□□ -1.26
CLK4-207ENST00000520909 DUSP10Q9Y6W6 482 aa7.21□□□□□ -1.26
CLK4-207ENST00000520909 ZBTB7AO95365 584 aa7.2□□□□□ -1.26
CLK4-207ENST00000520909 SARSP49591 514 aaKnown RBP7.2□□□□□ -1.26
CLK4-207ENST00000520909 RUFY4Q6ZNE9 571 aa7.2□□□□□ -1.26
CLK4-207ENST00000520909 TTLL7Q6ZT98 887 aa7.2□□□□□ -1.26
CLK4-207ENST00000520909 SMARCC2Q8TAQ2 1214 aa7.2□□□□□ -1.26
CLK4-207ENST00000520909 CPA5Q8WXQ8 436 aa7.2□□□□□ -1.26
CLK4-207ENST00000520909 LNPKQ9C0E8 428 aa7.2□□□□□ -1.26
CLK4-207ENST00000520909 BCAS3Q9H6U6 928 aa7.2□□□□□ -1.26
CLK4-207ENST00000520909 NTMQ9P121 344 aa7.2□□□□□ -1.26
CLK4-207ENST00000520909 WHRNQ9P202 907 aa7.2□□□□□ -1.26
CLK4-207ENST00000520909 AURKAO14965 403 aa7.19□□□□□ -1.26
CLK4-207ENST00000520909 ZNF76P36508 570 aa7.19□□□□□ -1.26
CLK4-207ENST00000520909 NETO2Q8NC67 525 aa7.19□□□□□ -1.26
CLK4-207ENST00000520909 PPT2Q9UMR5 302 aa7.19□□□□□ -1.26
CLK4-207ENST00000520909 RWDD3Q9Y3V2 267 aa7.19□□□□□ -1.26
CLK4-207ENST00000520909 ITGB3P05106 788 aa7.18□□□□□ -1.26
CLK4-207ENST00000520909 SEPHS1P49903 392 aa7.18□□□□□ -1.26
CLK4-207ENST00000520909 CACNB2Q08289 660 aaPredicted RBP7.18□□□□□ -1.26
CLK4-207ENST00000520909 ADCY4Q8NFM4 1077 aa7.18□□□□□ -1.26
CLK4-207ENST00000520909 USP33Q8TEY7 942 aa7.18□□□□□ -1.26
CLK4-207ENST00000520909 ZBTB8AQ96BR9 441 aa7.18□□□□□ -1.26
CLK4-207ENST00000520909 NOX5Q96PH1 765 aa7.18□□□□□ -1.26
CLK4-207ENST00000520909 SMPD4Q9NXE4 827 aa7.18□□□□□ -1.26
CLK4-207ENST00000520909 CBFA2T2O43439 604 aa7.17□□□□□ -1.26
CLK4-207ENST00000520909 GNPTABQ3T906 1256 aa7.17□□□□□ -1.26
CLK4-207ENST00000520909 ADAT2Q7Z6V5 191 aaKnown RBP7.17□□□□□ -1.26
CLK4-207ENST00000520909 CRBNQ96SW2 442 aa7.17□□□□□ -1.26
CLK4-207ENST00000520909 HAUS7Q99871 368 aa7.17□□□□□ -1.26
CLK4-207ENST00000520909 GBP3Q9H0R5 595 aa7.17□□□□□ -1.26
CLK4-207ENST00000520909 SPATA6Q9NWH7 488 aaPredicted RBP7.17□□□□□ -1.26
CLK4-207ENST00000520909 C2orf71A6NGG8 1288 aa7.16□□□□□ -1.26
CLK4-207ENST00000520909 SMARCA5O60264 1052 aaPredicted RBP7.16□□□□□ -1.26
CLK4-207ENST00000520909 VAMP4O75379 141 aa7.16□□□□□ -1.26
CLK4-207ENST00000520909 RBM10P98175 930 aaKnown RBP7.16□□□□□ -1.26
CLK4-207ENST00000520909 HEATR6Q6AI08 1181 aaKnown RBP7.16□□□□□ -1.26
CLK4-207ENST00000520909 ZNF761Q86XN6 746 aaPredicted RBP7.16□□□□□ -1.26
CLK4-207ENST00000520909 MCMBPQ9BTE3 642 aa7.16□□□□□ -1.26
CLK4-207ENST00000520909 SLC12A7Q9Y666 1083 aa7.16□□□□□ -1.26
CLK4-207ENST00000520909 LTBP3Q9NS15 1303 aa7.16□□□□□ -1.26
CLK4-207ENST00000520909 STXBP3O00186 592 aa7.15□□□□□ -1.26
CLK4-207ENST00000520909 PPP1R11O60927 126 aaPredicted RBP7.15□□□□□ -1.26
CLK4-207ENST00000520909 PPM1BO75688 479 aa7.15□□□□□ -1.26
CLK4-207ENST00000520909 ADAM17P78536 824 aa7.15□□□□□ -1.26
CLK4-207ENST00000520909 DPY19L1Q2PZI1 675 aa7.15□□□□□ -1.26
CLK4-207ENST00000520909 LDLRAD1Q5T700 205 aa7.15□□□□□ -1.26
CLK4-207ENST00000520909 CPNE8Q86YQ8 564 aa7.15□□□□□ -1.26
CLK4-207ENST00000520909 RBM15Q96T37 977 aaKnown RBP eCLIP7.15□□□□□ -1.26
CLK4-207ENST00000520909 MTA3Q9BTC8 594 aa7.15□□□□□ -1.26
CLK4-207ENST00000520909 GULP1Q9UBP9 304 aa7.15□□□□□ -1.26
CLK4-207ENST00000520909 BACE2Q9Y5Z0 518 aa7.15□□□□□ -1.26
CLK4-207ENST00000520909 TRBV23OR9-2A0A075B6M9 112 aa7.14□□□□□ -1.27
CLK4-207ENST00000520909 PAMP19021 973 aa7.14□□□□□ -1.27
CLK4-207ENST00000520909 AMPD2Q01433 879 aa7.14□□□□□ -1.27
CLK4-207ENST00000520909 DDX11Q96FC9 970 aa7.14□□□□□ -1.27
CLK4-207ENST00000520909 KLHL25Q9H0H3 589 aa7.14□□□□□ -1.27
CLK4-207ENST00000520909 PHAXQ9H814 394 aaKnown RBP7.14□□□□□ -1.27
CLK4-207ENST00000520909 PCDH18Q9HCL0 1135 aa7.14□□□□□ -1.27
CLK4-207ENST00000520909 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP7.14□□□□□ -1.27
CLK4-207ENST00000520909 FBLN5Q9UBX5 448 aa7.14□□□□□ -1.27
CLK4-207ENST00000520909 NPHP3-ACAD11A0A0J9YXS1 232 aa7.13□□□□□ -1.27
CLK4-207ENST00000520909 CYP2C8P10632 490 aa7.13□□□□□ -1.27
CLK4-207ENST00000520909 KIAA2012Q0VF49 1180 aa7.13□□□□□ -1.27
CLK4-207ENST00000520909 SMAD4Q13485 552 aaKnown RBP7.13□□□□□ -1.27
CLK4-207ENST00000520909 ZNF394Q53GI3 561 aa7.13□□□□□ -1.27
CLK4-207ENST00000520909 WWC2Q6AWC2 1192 aa7.13□□□□□ -1.27
CLK4-207ENST00000520909 LINC00482Q8N8I6 264 aa7.13□□□□□ -1.27
CLK4-207ENST00000520909 ADAMTS17Q8TE56 1095 aa7.13□□□□□ -1.27
CLK4-207ENST00000520909 NPHS1O60500 1241 aa7.12□□□□□ -1.27
CLK4-207ENST00000520909 SLC7A5Q01650 507 aa7.12□□□□□ -1.27
CLK4-207ENST00000520909 COL9A2Q14055 689 aaPredicted RBP7.12□□□□□ -1.27
CLK4-207ENST00000520909 CPZQ66K79 652 aa7.12□□□□□ -1.27
CLK4-207ENST00000520909 ARHGEF39Q8N4T4 335 aa7.12□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms