RNA–Protein interactions for RNA: ENST00000520399.1

ERGIC1-208, Transcript of endoplasmic reticulum-golgi intermediate compartment 1, humanhuman

TSL 1 (best)

Gene ERGIC1, Length 5,687 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC1-208ENST00000520399 RPS6KA1Q15418 735 aa13.21□□□□□ -0.29
ERGIC1-208ENST00000520399 ZMYM1Q5SVZ6 1142 aa13.21□□□□□ -0.29
ERGIC1-208ENST00000520399 JADE1Q6IE81 842 aa13.21□□□□□ -0.29
ERGIC1-208ENST00000520399 NEK8Q86SG6 692 aa13.21□□□□□ -0.29
ERGIC1-208ENST00000520399 MYOCDQ8IZQ8 938 aa13.21□□□□□ -0.29
ERGIC1-208ENST00000520399 TRIM58Q8NG06 486 aa13.21□□□□□ -0.29
ERGIC1-208ENST00000520399 CRKLP46109 303 aaKnown RBP13.21□□□□□ -0.3
ERGIC1-208ENST00000520399 PROSER3Q2NL68 480 aa13.21□□□□□ -0.3
ERGIC1-208ENST00000520399 UTP6Q9NYH9 597 aaKnown RBP13.21□□□□□ -0.3
ERGIC1-208ENST00000520399 DDX25Q9UHL0 483 aaKnown RBP13.21□□□□□ -0.3
ERGIC1-208ENST00000520399 OPHN1O60890 802 aa13.21□□□□□ -0.3
ERGIC1-208ENST00000520399 ARHGEF16Q5VV41 709 aa13.21□□□□□ -0.3
ERGIC1-208ENST00000520399 MAP4K1Q92918 833 aa13.21□□□□□ -0.3
ERGIC1-208ENST00000520399 ATP6V0A1Q93050 837 aa13.21□□□□□ -0.3
ERGIC1-208ENST00000520399 RILPQ96NA2 401 aa13.21□□□□□ -0.3
ERGIC1-208ENST00000520399 IFIH1Q9BYX4 1025 aaKnown RBP13.21□□□□□ -0.3
ERGIC1-208ENST00000520399 OSBPL3Q9H4L5 887 aa13.21□□□□□ -0.3
ERGIC1-208ENST00000520399 PANK4Q9NVE7 773 aa13.21□□□□□ -0.3
ERGIC1-208ENST00000520399 SEMA3EO15041 775 aa13.2□□□□□ -0.3
ERGIC1-208ENST00000520399 TPD52L2O43399 206 aaKnown RBP13.2□□□□□ -0.3
ERGIC1-208ENST00000520399 OATP04181 439 aa13.2□□□□□ -0.3
ERGIC1-208ENST00000520399 POLR2MP0CAP2 368 aa13.2□□□□□ -0.3
ERGIC1-208ENST00000520399 ADORA1P30542 326 aa13.2□□□□□ -0.3
ERGIC1-208ENST00000520399 TAF11Q15544 211 aa13.2□□□□□ -0.3
ERGIC1-208ENST00000520399 KLHL7Q8IXQ5 586 aa13.2□□□□□ -0.3
ERGIC1-208ENST00000520399 GTPBP6O43824 516 aaPredicted RBP13.2□□□□□ -0.3
ERGIC1-208ENST00000520399 ADKP55263 362 aaKnown RBP13.2□□□□□ -0.3
ERGIC1-208ENST00000520399 PAK2Q13177 524 aa13.2□□□□□ -0.3
ERGIC1-208ENST00000520399 CASC4Q6P4E1 433 aa13.2□□□□□ -0.3
ERGIC1-208ENST00000520399 MAIP1Q8WWC4 291 aa13.2□□□□□ -0.3
ERGIC1-208ENST00000520399 FAM207AQ9NSI2 230 aaPredicted RBP13.2□□□□□ -0.3
ERGIC1-208ENST00000520399 USTQ9Y2C2 406 aa13.2□□□□□ -0.3
ERGIC1-208ENST00000520399 MRPL11Q9Y3B7 192 aaKnown RBP13.2□□□□□ -0.3
ERGIC1-208ENST00000520399 CLIC4Q9Y696 253 aa13.2□□□□□ -0.3
ERGIC1-208ENST00000520399 PRPF6O94906 941 aaKnown RBP13.2□□□□□ -0.3
ERGIC1-208ENST00000520399 CLTAP09496 248 aa13.2□□□□□ -0.3
ERGIC1-208ENST00000520399 CYP2C19P33261 490 aa13.2□□□□□ -0.3
ERGIC1-208ENST00000520399 YWHAEP62258 255 aaKnown RBP13.2□□□□□ -0.3
ERGIC1-208ENST00000520399 LCA5Q86VQ0 697 aa13.2□□□□□ -0.3
ERGIC1-208ENST00000520399 LRRC47Q8N1G4 583 aaKnown RBP13.2□□□□□ -0.3
ERGIC1-208ENST00000520399 GPKOWQ92917 476 aaPredicted RBP eCLIP13.2□□□□□ -0.3
ERGIC1-208ENST00000520399 GFM2Q969S9 779 aaKnown RBP13.2□□□□□ -0.3
ERGIC1-208ENST00000520399 IWS1Q96ST2 819 aa13.2□□□□□ -0.3
ERGIC1-208ENST00000520399 TLR7Q9NYK1 1049 aaKnown RBP13.2□□□□□ -0.3
ERGIC1-208ENST00000520399 CD2APQ9Y5K6 639 aa13.2□□□□□ -0.3
ERGIC1-208ENST00000520399 PDE8BO95263 885 aa13.2□□□□□ -0.3
ERGIC1-208ENST00000520399 PRKG1Q13976 671 aa13.2□□□□□ -0.3
ERGIC1-208ENST00000520399 FAM102BQ5T8I3 360 aa13.2□□□□□ -0.3
ERGIC1-208ENST00000520399 PEX26Q7Z412 305 aa13.2□□□□□ -0.3
ERGIC1-208ENST00000520399 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.2□□□□□ -0.3
ERGIC1-208ENST00000520399 CENPKQ9BS16 269 aa13.2□□□□□ -0.3
ERGIC1-208ENST00000520399 CARD10Q9BWT7 1032 aa13.2□□□□□ -0.3
ERGIC1-208ENST00000520399 ZNF408Q9H9D4 720 aa13.2□□□□□ -0.3
ERGIC1-208ENST00000520399 PCDHA7Q9UN72 937 aa13.2□□□□□ -0.3
ERGIC1-208ENST00000520399 ZNF804BA4D1E1 1349 aa13.2□□□□□ -0.3
ERGIC1-208ENST00000520399 ADD1P35611 737 aaKnown RBP13.19□□□□□ -0.3
ERGIC1-208ENST00000520399 LONP1P36776 959 aaKnown RBP13.19□□□□□ -0.3
ERGIC1-208ENST00000520399 MTMR3Q13615 1198 aa13.19□□□□□ -0.3
ERGIC1-208ENST00000520399 TNFAIP1Q13829 316 aa13.19□□□□□ -0.3
ERGIC1-208ENST00000520399 CERKLQ49MI3 558 aaPredicted RBP13.19□□□□□ -0.3
ERGIC1-208ENST00000520399 ANKRD20A3Q5VUR7 823 aa13.19□□□□□ -0.3
ERGIC1-208ENST00000520399 MRPL46Q9H2W6 279 aaKnown RBP13.19□□□□□ -0.3
ERGIC1-208ENST00000520399 ITM2BQ9Y287 266 aa13.19□□□□□ -0.3
ERGIC1-208ENST00000520399 PCDHB13Q9Y5F0 798 aa13.19□□□□□ -0.3
ERGIC1-208ENST00000520399 CDC42BPGQ6DT37 1551 aa13.19□□□□□ -0.3
ERGIC1-208ENST00000520399 SPDYE16A6NNV3 312 aaPredicted RBP13.19□□□□□ -0.3
ERGIC1-208ENST00000520399 KLRF2D3W0D1 207 aa13.19□□□□□ -0.3
ERGIC1-208ENST00000520399 S100BP04271 92 aaPredicted RBP13.19□□□□□ -0.3
ERGIC1-208ENST00000520399 KRT19P08727 400 aa13.19□□□□□ -0.3
ERGIC1-208ENST00000520399 PHKA1P46020 1223 aa13.19□□□□□ -0.3
ERGIC1-208ENST00000520399 CRYMQ14894 314 aa13.19□□□□□ -0.3
ERGIC1-208ENST00000520399 SPDYE2Q495Y8 402 aa13.19□□□□□ -0.3
ERGIC1-208ENST00000520399 SPOUT1Q5T280 376 aaKnown RBP13.19□□□□□ -0.3
ERGIC1-208ENST00000520399 DCUN1D2Q6PH85 259 aa13.19□□□□□ -0.3
ERGIC1-208ENST00000520399 C2CD5Q86YS7 1000 aa13.19□□□□□ -0.3
ERGIC1-208ENST00000520399 CHMP6Q96FZ7 201 aa13.19□□□□□ -0.3
ERGIC1-208ENST00000520399 RPGRIP1Q96KN7 1286 aa13.19□□□□□ -0.3
ERGIC1-208ENST00000520399 PUS3Q9BZE2 481 aaKnown RBP13.19□□□□□ -0.3
ERGIC1-208ENST00000520399 MYO1AQ9UBC5 1043 aa13.19□□□□□ -0.3
ERGIC1-208ENST00000520399 FMNL1O95466 1100 aaPredicted RBP13.19□□□□□ -0.3
ERGIC1-208ENST00000520399 USPL1Q5W0Q7 1092 aa13.19□□□□□ -0.3
ERGIC1-208ENST00000520399 GPT2Q8TD30 523 aa13.19□□□□□ -0.3
ERGIC1-208ENST00000520399 PDE11AQ9HCR9 933 aa13.19□□□□□ -0.3
ERGIC1-208ENST00000520399 TMEM94Q12767 1356 aa13.19□□□□□ -0.3
ERGIC1-208ENST00000520399 ROBO2Q9HCK4 1378 aa13.19□□□□□ -0.3
ERGIC1-208ENST00000520399 RPN1P04843 607 aaKnown RBP13.19□□□□□ -0.3
ERGIC1-208ENST00000520399 TROVE2P10155 538 aaKnown RBP eCLIP13.19□□□□□ -0.3
ERGIC1-208ENST00000520399 ARHGAP44Q17R89 818 aa13.19□□□□□ -0.3
ERGIC1-208ENST00000520399 GPIHBP1Q8IV16 184 aa13.19□□□□□ -0.3
ERGIC1-208ENST00000520399 TRIM31Q9BZY9 425 aa13.19□□□□□ -0.3
ERGIC1-208ENST00000520399 ASIC3Q9UHC3 531 aa13.19□□□□□ -0.3
ERGIC1-208ENST00000520399 XRCC5P13010 732 aaKnown RBP13.19□□□□□ -0.3
ERGIC1-208ENST00000520399 RBM6P78332 1123 aaKnown RBP13.19□□□□□ -0.3
ERGIC1-208ENST00000520399 ARHGEF25Q86VW2 580 aa13.19□□□□□ -0.3
ERGIC1-208ENST00000520399 RABGGTAQ92696 567 aa13.19□□□□□ -0.3
ERGIC1-208ENST00000520399 DBNLQ9UJU6 430 aaKnown RBP13.19□□□□□ -0.3
ERGIC1-208ENST00000520399 ANKARQ7Z5J8 1434 aa13.18□□□□□ -0.3
ERGIC1-208ENST00000520399 SNUPNO95149 360 aaKnown RBP13.18□□□□□ -0.3
ERGIC1-208ENST00000520399 GOLGA8HP0CJ92 632 aa13.18□□□□□ -0.3
ERGIC1-208ENST00000520399 NOP9Q86U38 636 aaKnown RBP13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms