RNA–Protein interactions for RNA: ENST00000519617.1

CCNC-208, Transcript of cyclin C, humanhuman

TSL 3

Gene CCNC, Length 246 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNC-208ENST00000519617 DCAF15Q66K64 600 aa3.29□□□□□ -1.88
CCNC-208ENST00000519617 HS2ST1Q7LGA3 356 aa3.29□□□□□ -1.88
CCNC-208ENST00000519617 USP48Q86UV5 1035 aa3.29□□□□□ -1.88
CCNC-208ENST00000519617 ZNF761Q86XN6 746 aaPredicted RBP3.29□□□□□ -1.88
CCNC-208ENST00000519617 LINC00482Q8N8I6 264 aa3.29□□□□□ -1.88
CCNC-208ENST00000519617 RGS22Q8NE09 1264 aa3.29□□□□□ -1.88
CCNC-208ENST00000519617 BRF1Q92994 677 aa3.29□□□□□ -1.88
CCNC-208ENST00000519617 NOX5Q96PH1 765 aa3.29□□□□□ -1.88
CCNC-208ENST00000519617 NTMQ9P121 344 aa3.29□□□□□ -1.88
CCNC-208ENST00000519617 ZNRF3Q9ULT6 936 aa3.29□□□□□ -1.88
CCNC-208ENST00000519617 SF3B6Q9Y3B4 125 aaKnown RBP3.29□□□□□ -1.88
CCNC-208ENST00000519617 SUV39H1O43463 412 aa3.28□□□□□ -1.88
CCNC-208ENST00000519617 PLATP00750 562 aa3.28□□□□□ -1.88
CCNC-208ENST00000519617 IMPDH2P12268 514 aa3.28□□□□□ -1.88
CCNC-208ENST00000519617 IFNGR1P15260 489 aa3.28□□□□□ -1.88
CCNC-208ENST00000519617 ZNF20P17024 532 aa3.28□□□□□ -1.88
CCNC-208ENST00000519617 ERCC3P19447 782 aa3.28□□□□□ -1.88
CCNC-208ENST00000519617 POU4F1Q01851 419 aa3.28□□□□□ -1.88
CCNC-208ENST00000519617 KRTAP1-1Q07627 177 aa3.28□□□□□ -1.88
CCNC-208ENST00000519617 TBC1D10BQ4KMP7 808 aaPredicted RBP3.28□□□□□ -1.88
CCNC-208ENST00000519617 TDRD10Q5VZ19 366 aaKnown RBP3.28□□□□□ -1.88
CCNC-208ENST00000519617 RCSD1Q6JBY9 416 aa3.28□□□□□ -1.88
CCNC-208ENST00000519617 TTLL7Q6ZT98 887 aa3.28□□□□□ -1.88
CCNC-208ENST00000519617 PPFIBP1Q86W92 1011 aa3.28□□□□□ -1.88
CCNC-208ENST00000519617 FIBCD1Q8N539 461 aa3.28□□□□□ -1.88
CCNC-208ENST00000519617 NETO2Q8NC67 525 aa3.28□□□□□ -1.88
CCNC-208ENST00000519617 SLC16A11Q8NCK7 471 aa3.28□□□□□ -1.88
CCNC-208ENST00000519617 SMARCC2Q8TAQ2 1214 aa3.28□□□□□ -1.88
CCNC-208ENST00000519617 PEX11GQ96HA9 241 aa3.28□□□□□ -1.88
CCNC-208ENST00000519617 TM9SF2Q99805 663 aa3.28□□□□□ -1.88
CCNC-208ENST00000519617 DIS3Q9Y2L1 958 aaKnown RBP3.28□□□□□ -1.88
CCNC-208ENST00000519617 ZNF451Q9Y4E5 1061 aa3.28□□□□□ -1.88
CCNC-208ENST00000519617 FAM86C2PA6NEL3 165 aa3.27□□□□□ -1.89
CCNC-208ENST00000519617 PPP1R11O60927 126 aaPredicted RBP3.27□□□□□ -1.89
CCNC-208ENST00000519617 ZBTB7AO95365 584 aa3.27□□□□□ -1.89
CCNC-208ENST00000519617 CD3EP07766 207 aa3.27□□□□□ -1.89
CCNC-208ENST00000519617 ITGA4P13612 1032 aa3.27□□□□□ -1.89
CCNC-208ENST00000519617 EEF1DP3Q658K8 133 aa3.27□□□□□ -1.89
CCNC-208ENST00000519617 CABP7Q86V35 215 aa3.27□□□□□ -1.89
CCNC-208ENST00000519617 LZTR1Q8N653 840 aa3.27□□□□□ -1.89
CCNC-208ENST00000519617 ADAMTS17Q8TE56 1095 aa3.27□□□□□ -1.89
CCNC-208ENST00000519617 LOXL4Q96JB6 756 aa3.27□□□□□ -1.89
CCNC-208ENST00000519617 C8orf49Q96NF6 230 aa3.27□□□□□ -1.89
CCNC-208ENST00000519617 SORCS2Q96PQ0 1159 aa3.27□□□□□ -1.89
CCNC-208ENST00000519617 MTA3Q9BTC8 594 aa3.27□□□□□ -1.89
CCNC-208ENST00000519617 SSBP3Q9BWW4 388 aaPredicted RBP3.27□□□□□ -1.89
CCNC-208ENST00000519617 BCAS3Q9H6U6 928 aa3.27□□□□□ -1.89
CCNC-208ENST00000519617 RXFP1Q9HBX9 757 aa3.27□□□□□ -1.89
CCNC-208ENST00000519617 SRRDQ9UH36 339 aa3.27□□□□□ -1.89
CCNC-208ENST00000519617 NUDT5Q9UKK9 219 aa3.27□□□□□ -1.89
CCNC-208ENST00000519617 AURKAO14965 403 aa3.26□□□□□ -1.89
CCNC-208ENST00000519617 FSHBP01225 129 aa3.26□□□□□ -1.89
CCNC-208ENST00000519617 TP53P04637 393 aaPredicted RBP3.26□□□□□ -1.89
CCNC-208ENST00000519617 KIAA2012Q0VF49 1180 aa3.26□□□□□ -1.89
CCNC-208ENST00000519617 MRPL58Q14197 206 aaKnown RBP3.26□□□□□ -1.89
CCNC-208ENST00000519617 TCEAL1Q15170 157 aa3.26□□□□□ -1.89
CCNC-208ENST00000519617 ZYXQ15942 572 aaKnown RBP3.26□□□□□ -1.89
CCNC-208ENST00000519617 UNC5AQ6ZN44 842 aa3.26□□□□□ -1.89
CCNC-208ENST00000519617 KIAA0825Q8IV33 1275 aa3.26□□□□□ -1.89
CCNC-208ENST00000519617 RBBP8NLQ8NC74 664 aaPredicted RBP3.26□□□□□ -1.89
CCNC-208ENST00000519617 ZBTB8AQ96BR9 441 aa3.26□□□□□ -1.89
CCNC-208ENST00000519617 ZDHHC15Q96MV8 337 aa3.26□□□□□ -1.89
CCNC-208ENST00000519617 MCMBPQ9BTE3 642 aa3.26□□□□□ -1.89
CCNC-208ENST00000519617 SPON2Q9BUD6 331 aa3.26□□□□□ -1.89
CCNC-208ENST00000519617 NOL6Q9H6R4 1146 aaKnown RBP3.26□□□□□ -1.89
CCNC-208ENST00000519617 PCDH18Q9HCL0 1135 aa3.26□□□□□ -1.89
CCNC-208ENST00000519617 FBLN5Q9UBX5 448 aa3.26□□□□□ -1.89
CCNC-208ENST00000519617 ZNF214Q9UL59 606 aaPredicted RBP3.26□□□□□ -1.89
CCNC-208ENST00000519617 CBFA2T2O43439 604 aa3.25□□□□□ -1.89
CCNC-208ENST00000519617 SMARCA5O60264 1052 aaPredicted RBP3.25□□□□□ -1.89
CCNC-208ENST00000519617 GUCY2CP25092 1073 aa3.25□□□□□ -1.89
CCNC-208ENST00000519617 RPL13P26373 211 aaKnown RBP3.25□□□□□ -1.89
CCNC-208ENST00000519617 THBS2P35442 1172 aa3.25□□□□□ -1.89
CCNC-208ENST00000519617 RBM10P98175 930 aaKnown RBP3.25□□□□□ -1.89
CCNC-208ENST00000519617 RGL3Q3MIN7 710 aa3.25□□□□□ -1.89
CCNC-208ENST00000519617 FAM26FQ5R3K3 315 aa3.25□□□□□ -1.89
CCNC-208ENST00000519617 LGI4Q8N135 537 aa3.25□□□□□ -1.89
CCNC-208ENST00000519617 DVL3Q92997 716 aaPredicted RBP3.25□□□□□ -1.89
CCNC-208ENST00000519617 DDX11Q96FC9 970 aa3.25□□□□□ -1.89
CCNC-208ENST00000519617 GORASP1Q9BQQ3 440 aa3.25□□□□□ -1.89
CCNC-208ENST00000519617 C11orf84Q9BUA3 381 aaPredicted RBP3.25□□□□□ -1.89
CCNC-208ENST00000519617 WHRNQ9P202 907 aa3.25□□□□□ -1.89
CCNC-208ENST00000519617 RWDD3Q9Y3V2 267 aa3.25□□□□□ -1.89
CCNC-208ENST00000519617 SHROOM4Q9ULL8 1493 aa3.24□□□□□ -1.89
CCNC-208ENST00000519617 C8BP07358 591 aa3.24□□□□□ -1.89
CCNC-208ENST00000519617 CYP2C8P10632 490 aa3.24□□□□□ -1.89
CCNC-208ENST00000519617 SMAD4Q13485 552 aaKnown RBP3.24□□□□□ -1.89
CCNC-208ENST00000519617 WWC2Q6AWC2 1192 aa3.24□□□□□ -1.89
CCNC-208ENST00000519617 KYQ8NBH2 561 aa3.24□□□□□ -1.89
CCNC-208ENST00000519617 CHST13Q8NET6 341 aa3.24□□□□□ -1.89
CCNC-208ENST00000519617 RNF34Q969K3 372 aa3.24□□□□□ -1.89
CCNC-208ENST00000519617 FERD3LQ96RJ6 166 aa3.24□□□□□ -1.89
CCNC-208ENST00000519617 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP3.24□□□□□ -1.89
CCNC-208ENST00000519617 INVSQ9Y283 1065 aa3.24□□□□□ -1.89
CCNC-208ENST00000519617 LTBP3Q9NS15 1303 aa3.23□□□□□ -1.89
CCNC-208ENST00000519617 TRBV23OR9-2A0A075B6M9 112 aa3.23□□□□□ -1.89
CCNC-208ENST00000519617 C2orf71A6NGG8 1288 aa3.23□□□□□ -1.89
CCNC-208ENST00000519617 MROH6A6NGR9 719 aa3.23□□□□□ -1.89
CCNC-208ENST00000519617 VAMP4O75379 141 aa3.23□□□□□ -1.89
CCNC-208ENST00000519617 C6P13671 934 aa3.23□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms