RNA–Protein interactions for RNA: ENST00000519362.5

SPIDR-210, Transcript of scaffold protein involved in DNA repair, human

TSL 2

Gene SPIDR, Length 1,807 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPIDR-210	ENST00000519362	CTIF	O43310	598 aa	Known RBP	13.91	□□□□□ -0.18
SPIDR-210	ENST00000519362	STX10	O60499	249 aa		13.91	□□□□□ -0.18
SPIDR-210	ENST00000519362	COBL	O75128	1261 aa		13.91	□□□□□ -0.18
SPIDR-210	ENST00000519362	GRB10	Q13322	594 aa		13.91	□□□□□ -0.18
SPIDR-210	ENST00000519362	RRP1B	Q14684	758 aa	Known RBP	13.91	□□□□□ -0.18
SPIDR-210	ENST00000519362	KRT31	Q15323	416 aa		13.91	□□□□□ -0.18
SPIDR-210	ENST00000519362	CDC37	Q16543	378 aa	Predicted RBP	13.91	□□□□□ -0.18
SPIDR-210	ENST00000519362	TMEM266	Q2M3C6	531 aa		13.91	□□□□□ -0.18
SPIDR-210	ENST00000519362	FILIP1L	Q4L180	1135 aa		13.91	□□□□□ -0.18
SPIDR-210	ENST00000519362	CALML4	Q96GE6	196 aa		13.91	□□□□□ -0.18
SPIDR-210	ENST00000519362	CSRNP1	Q96S65	589 aa		13.91	□□□□□ -0.18
SPIDR-210	ENST00000519362	HERC5	Q9UII4	1024 aa	Known RBP	13.91	□□□□□ -0.18
SPIDR-210	ENST00000519362	SYNPO2	Q9UMS6	1093 aa		13.91	□□□□□ -0.18
SPIDR-210	ENST00000519362	MAPK8IP1	Q9UQF2	711 aa		13.91	□□□□□ -0.18
SPIDR-210	ENST00000519362	CCP110	O43303	1012 aa		13.9	□□□□□ -0.18
SPIDR-210	ENST00000519362	NDUFB10	O96000	172 aa		13.9	□□□□□ -0.18
SPIDR-210	ENST00000519362	GH2	P01242	217 aa		13.9	□□□□□ -0.18
SPIDR-210	ENST00000519362	GCFC2	P16383	781 aa	Known RBP	13.9	□□□□□ -0.18
SPIDR-210	ENST00000519362	ADK	P55263	362 aa	Known RBP	13.9	□□□□□ -0.18
SPIDR-210	ENST00000519362	TCP11X2	Q5H9J9	407 aa		13.9	□□□□□ -0.18
SPIDR-210	ENST00000519362	RBM26	Q5T8P6	1007 aa	Known RBP	13.9	□□□□□ -0.18
SPIDR-210	ENST00000519362	HAS1	Q92839	578 aa		13.9	□□□□□ -0.18
SPIDR-210	ENST00000519362	PNMA5	Q96PV4	448 aa		13.9	□□□□□ -0.18
SPIDR-210	ENST00000519362	BAG1	Q99933	345 aa	Predicted RBP	13.9	□□□□□ -0.18
SPIDR-210	ENST00000519362	RAB34	Q9BZG1	259 aa		13.9	□□□□□ -0.18
SPIDR-210	ENST00000519362	BLOC1S4	Q9NUP1	217 aa		13.9	□□□□□ -0.18
SPIDR-210	ENST00000519362	STK17A	Q9UEE5	414 aa		13.9	□□□□□ -0.18
SPIDR-210	ENST00000519362	PCDHA1	Q9Y5I3	950 aa		13.9	□□□□□ -0.18
SPIDR-210	ENST00000519362	ITIH6	Q6UXX5	1313 aa		13.9	□□□□□ -0.18
SPIDR-210	ENST00000519362	GOLGB1	Q14789	3259 aa	Known RBP	13.9	□□□□□ -0.18
SPIDR-210	ENST00000519362	PSMD14	O00487	310 aa		13.9	□□□□□ -0.18
SPIDR-210	ENST00000519362	TUBB4A	P04350	444 aa		13.9	□□□□□ -0.18
SPIDR-210	ENST00000519362	AMPD3	Q01432	767 aa		13.9	□□□□□ -0.18
SPIDR-210	ENST00000519362	IRF2BP1	Q8IU81	584 aa		13.9	□□□□□ -0.18
SPIDR-210	ENST00000519362	NAP1L4	Q99733	375 aa	Known RBP	13.9	□□□□□ -0.18
SPIDR-210	ENST00000519362	VPS33B	Q9H267	617 aa		13.9	□□□□□ -0.18
SPIDR-210	ENST00000519362	DDX25	Q9UHL0	483 aa	Known RBP	13.9	□□□□□ -0.18
SPIDR-210	ENST00000519362	MYH7B	A7E2Y1	1941 aa		13.89	□□□□□ -0.19
SPIDR-210	ENST00000519362		A0A1W2PRG0	241 aa		13.89	□□□□□ -0.19
SPIDR-210	ENST00000519362	TRIM49B	A6NDI0	452 aa		13.89	□□□□□ -0.19
SPIDR-210	ENST00000519362	POTEM	A6NI47	508 aa		13.89	□□□□□ -0.19
SPIDR-210	ENST00000519362	KCNJ18	B7U540	433 aa		13.89	□□□□□ -0.19
SPIDR-210	ENST00000519362	USP17L15	C9J2P7	530 aa		13.89	□□□□□ -0.19
SPIDR-210	ENST00000519362	USP17L13	C9JLJ4	530 aa		13.89	□□□□□ -0.19
SPIDR-210	ENST00000519362	USP17L11	C9JVI0	530 aa		13.89	□□□□□ -0.19
SPIDR-210	ENST00000519362	USP17L18	D6R9N7	530 aa		13.89	□□□□□ -0.19
SPIDR-210	ENST00000519362	USP17L22	D6RA61	530 aa		13.89	□□□□□ -0.19
SPIDR-210	ENST00000519362	USP17L17	D6RBQ6	530 aa		13.89	□□□□□ -0.19
SPIDR-210	ENST00000519362	USP17L19	D6RCP7	530 aa		13.89	□□□□□ -0.19
SPIDR-210	ENST00000519362	USP17L20	D6RJB6	530 aa		13.89	□□□□□ -0.19
SPIDR-210	ENST00000519362	RAD21	O60216	631 aa		13.89	□□□□□ -0.19
SPIDR-210	ENST00000519362	RAD17	O75943	681 aa		13.89	□□□□□ -0.19
SPIDR-210	ENST00000519362	DPEP1	P16444	411 aa		13.89	□□□□□ -0.19
SPIDR-210	ENST00000519362	COPB1	P53618	953 aa	Known RBP	13.89	□□□□□ -0.19
SPIDR-210	ENST00000519362	PMS1	P54277	932 aa	Known RBP	13.89	□□□□□ -0.19
SPIDR-210	ENST00000519362	USP17L24	Q0WX57	530 aa		13.89	□□□□□ -0.19
SPIDR-210	ENST00000519362	STIM1	Q13586	685 aa		13.89	□□□□□ -0.19
SPIDR-210	ENST00000519362	KCNJ12	Q14500	433 aa		13.89	□□□□□ -0.19
SPIDR-210	ENST00000519362	COBLL1	Q53SF7	1204 aa		13.89	□□□□□ -0.19
SPIDR-210	ENST00000519362	USP17L6P	Q6QN14	398 aa		13.89	□□□□□ -0.19
SPIDR-210	ENST00000519362	BTNL9	Q6UXG8	535 aa		13.89	□□□□□ -0.19
SPIDR-210	ENST00000519362	CCDC125	Q86Z20	511 aa		13.89	□□□□□ -0.19
SPIDR-210	ENST00000519362	CRYGN	Q8WXF5	182 aa		13.89	□□□□□ -0.19
SPIDR-210	ENST00000519362	DHTKD1	Q96HY7	919 aa	Predicted RBP	13.89	□□□□□ -0.19
SPIDR-210	ENST00000519362	PANX2	Q96RD6	677 aa		13.89	□□□□□ -0.19
SPIDR-210	ENST00000519362	GTPBP4	Q9BZE4	634 aa	Known RBP	13.89	□□□□□ -0.19
SPIDR-210	ENST00000519362	TMOD2	Q9NZR1	351 aa		13.89	□□□□□ -0.19
SPIDR-210	ENST00000519362	CNTNAP1	P78357	1384 aa		13.88	□□□□□ -0.19
SPIDR-210	ENST00000519362	CYP3A7-CYP3A51P	A0A087WV96	503 aa		13.88	□□□□□ -0.19
SPIDR-210	ENST00000519362	AKR1B15	C9JRZ8	316 aa	Predicted RBP	13.88	□□□□□ -0.19
SPIDR-210	ENST00000519362	MEIS2	O14770	477 aa		13.88	□□□□□ -0.19
SPIDR-210	ENST00000519362	PSMA7	O14818	248 aa		13.88	□□□□□ -0.19
SPIDR-210	ENST00000519362	CYP3A7	P24462	503 aa		13.88	□□□□□ -0.19
SPIDR-210	ENST00000519362	USP11	P51784	963 aa		13.88	□□□□□ -0.19
SPIDR-210	ENST00000519362	TMEM119	Q4V9L6	283 aa		13.88	□□□□□ -0.19
SPIDR-210	ENST00000519362	TTI2	Q6NXR4	508 aa		13.88	□□□□□ -0.19
SPIDR-210	ENST00000519362	SV2B	Q7L1I2	683 aa		13.88	□□□□□ -0.19
SPIDR-210	ENST00000519362	REXO1L1P	Q8IX06	675 aa		13.88	□□□□□ -0.19
SPIDR-210	ENST00000519362	LARGE2	Q8N3Y3	721 aa		13.88	□□□□□ -0.19
SPIDR-210	ENST00000519362	KIF18A	Q8NI77	898 aa		13.88	□□□□□ -0.19
SPIDR-210	ENST00000519362	SLC16A10	Q8TF71	515 aa		13.88	□□□□□ -0.19
SPIDR-210	ENST00000519362	FAM151A	Q8WW52	585 aa		13.88	□□□□□ -0.19
SPIDR-210	ENST00000519362	TSC1	Q92574	1164 aa		13.88	□□□□□ -0.19
SPIDR-210	ENST00000519362	ZNF592	Q92610	1267 aa		13.88	□□□□□ -0.19
SPIDR-210	ENST00000519362	CCDC47	Q96A33	483 aa	Known RBP	13.88	□□□□□ -0.19
SPIDR-210	ENST00000519362	MBOAT7	Q96N66	472 aa		13.88	□□□□□ -0.19
SPIDR-210	ENST00000519362	NUP88	Q99567	741 aa	Predicted RBP	13.88	□□□□□ -0.19
SPIDR-210	ENST00000519362	AMN	Q9BXJ7	453 aa		13.88	□□□□□ -0.19
SPIDR-210	ENST00000519362	ZNF277	Q9NRM2	450 aa	Predicted RBP	13.88	□□□□□ -0.19
SPIDR-210	ENST00000519362	ZNF70	Q9UC06	446 aa	Predicted RBP	13.88	□□□□□ -0.19
SPIDR-210	ENST00000519362	KIF13B	Q9NQT8	1826 aa		13.88	□□□□□ -0.19
SPIDR-210	ENST00000519362	TCP10L2	B9ZVM9	353 aa		13.87	□□□□□ -0.19
SPIDR-210	ENST00000519362	N4BP3	O15049	544 aa		13.87	□□□□□ -0.19
SPIDR-210	ENST00000519362	BMP3	P12645	472 aa		13.87	□□□□□ -0.19
SPIDR-210	ENST00000519362	CCT6A	P40227	531 aa	Known RBP	13.87	□□□□□ -0.19
SPIDR-210	ENST00000519362	PPP1R2	P41236	205 aa		13.87	□□□□□ -0.19
SPIDR-210	ENST00000519362	BAG6	P46379	1132 aa		13.87	□□□□□ -0.19
SPIDR-210	ENST00000519362	MMP14	P50281	582 aa		13.87	□□□□□ -0.19
SPIDR-210	ENST00000519362	ASIC1	P78348	528 aa		13.87	□□□□□ -0.19
SPIDR-210	ENST00000519362	PDE4D	Q08499	809 aa		13.87	□□□□□ -0.19

Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms