RNA–Protein interactions for RNA: ENST00000518743.1

HMGB1P23-201, Transcript of high mobility group box 1 pseudogene 23, humanhuman

BASIC

Gene HMGB1P23, Length 568 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P23-201ENST00000518743 TMEM87BQ96K49 555 aa6.28□□□□□ -1.4
HMGB1P23-201ENST00000518743 WDR18Q9BV38 432 aa6.28□□□□□ -1.4
HMGB1P23-201ENST00000518743 RUSC1Q9BVN2 902 aa6.28□□□□□ -1.4
HMGB1P23-201ENST00000518743 COL25A1Q9BXS0 654 aaPredicted RBP6.28□□□□□ -1.4
HMGB1P23-201ENST00000518743 MRPL4Q9BYD3 311 aaKnown RBP6.28□□□□□ -1.4
HMGB1P23-201ENST00000518743 CYP4F12Q9HCS2 524 aa6.28□□□□□ -1.4
HMGB1P23-201ENST00000518743 HOMER2Q9NSB8 354 aa6.28□□□□□ -1.4
HMGB1P23-201ENST00000518743 INTS7Q9NVH2 962 aaKnown RBP6.28□□□□□ -1.4
HMGB1P23-201ENST00000518743 LRP2BPQ9P2M1 347 aa6.28□□□□□ -1.4
HMGB1P23-201ENST00000518743 CCNL1Q9UK58 526 aaPredicted RBP6.28□□□□□ -1.4
HMGB1P23-201ENST00000518743 HIF3AQ9Y2N7 669 aa6.28□□□□□ -1.4
HMGB1P23-201ENST00000518743 LTBP1Q14766 1721 aa6.28□□□□□ -1.4
HMGB1P23-201ENST00000518743 SPATA31E1Q6ZUB1 1445 aa6.27□□□□□ -1.41
HMGB1P23-201ENST00000518743 CLEC3AO75596 197 aa6.27□□□□□ -1.41
HMGB1P23-201ENST00000518743 PDGFRBP09619 1106 aa6.27□□□□□ -1.41
HMGB1P23-201ENST00000518743 FAM153BP0C7A2 387 aa6.27□□□□□ -1.41
HMGB1P23-201ENST00000518743 PMLP29590 882 aa6.27□□□□□ -1.41
HMGB1P23-201ENST00000518743 ECE1P42892 770 aa6.27□□□□□ -1.41
HMGB1P23-201ENST00000518743 KRT76Q01546 638 aa6.27□□□□□ -1.41
HMGB1P23-201ENST00000518743 SAFB2Q14151 953 aaKnown RBP eCLIP6.27□□□□□ -1.41
HMGB1P23-201ENST00000518743 SETDB1Q15047 1291 aa6.27□□□□□ -1.41
HMGB1P23-201ENST00000518743 ZYXQ15942 572 aaKnown RBP6.27□□□□□ -1.41
HMGB1P23-201ENST00000518743 PLEKHG6Q3KR16 790 aa6.27□□□□□ -1.41
HMGB1P23-201ENST00000518743 TKFCQ3LXA3 575 aa6.27□□□□□ -1.41
HMGB1P23-201ENST00000518743 WWC2Q6AWC2 1192 aa6.27□□□□□ -1.41
HMGB1P23-201ENST00000518743 POMZP3Q6PJE2 187 aa6.27□□□□□ -1.41
HMGB1P23-201ENST00000518743 CHSY3Q70JA7 882 aa6.27□□□□□ -1.41
HMGB1P23-201ENST00000518743 SMIM5Q71RC9 77 aa6.27□□□□□ -1.41
HMGB1P23-201ENST00000518743 FLAD1Q8NFF5 587 aa6.27□□□□□ -1.41
HMGB1P23-201ENST00000518743 EDARADDQ8WWZ3 215 aa6.27□□□□□ -1.41
HMGB1P23-201ENST00000518743 KLHL6Q8WZ60 621 aa6.27□□□□□ -1.41
HMGB1P23-201ENST00000518743 GPR101Q96P66 508 aaPredicted RBP6.27□□□□□ -1.41
HMGB1P23-201ENST00000518743 AARSD1Q9BTE6 412 aaKnown RBP6.27□□□□□ -1.41
HMGB1P23-201ENST00000518743 DHRS4Q9BTZ2 278 aa6.27□□□□□ -1.41
HMGB1P23-201ENST00000518743 CARD10Q9BWT7 1032 aa6.27□□□□□ -1.41
HMGB1P23-201ENST00000518743 MAPRE3Q9UPY8 281 aa6.27□□□□□ -1.41
HMGB1P23-201ENST00000518743 PCDHGC5Q9Y5F6 944 aa6.27□□□□□ -1.41
HMGB1P23-201ENST00000518743 TIAM2Q8IVF5 1701 aa6.26□□□□□ -1.41
HMGB1P23-201ENST00000518743 MEGF11A6BM72 1044 aa6.26□□□□□ -1.41
HMGB1P23-201ENST00000518743 RASSF10A6NK89 507 aa6.26□□□□□ -1.41
HMGB1P23-201ENST00000518743 SPDYE3A6NKU9 549 aa6.26□□□□□ -1.41
HMGB1P23-201ENST00000518743 CHURC1-FNTBB4DL54 471 aa6.26□□□□□ -1.41
HMGB1P23-201ENST00000518743 PIK3R2O00459 728 aa6.26□□□□□ -1.41
HMGB1P23-201ENST00000518743 CA12O43570 354 aa6.26□□□□□ -1.41
HMGB1P23-201ENST00000518743 ADCY3O60266 1144 aa6.26□□□□□ -1.41
HMGB1P23-201ENST00000518743 ECEL1O95672 775 aa6.26□□□□□ -1.41
HMGB1P23-201ENST00000518743 STAT3P40763 770 aa6.26□□□□□ -1.41
HMGB1P23-201ENST00000518743 RAC1P63000 192 aa6.26□□□□□ -1.41
HMGB1P23-201ENST00000518743 RNF4P78317 190 aa6.26□□□□□ -1.41
HMGB1P23-201ENST00000518743 MAP7Q14244 749 aa6.26□□□□□ -1.41
HMGB1P23-201ENST00000518743 RNFT1Q5M7Z0 435 aa6.26□□□□□ -1.41
HMGB1P23-201ENST00000518743 FERMT3Q86UX7 667 aa6.26□□□□□ -1.41
HMGB1P23-201ENST00000518743 RPUSD2Q8IZ73 545 aaKnown RBP6.26□□□□□ -1.41
HMGB1P23-201ENST00000518743 CYB5D2Q8WUJ1 264 aa6.26□□□□□ -1.41
HMGB1P23-201ENST00000518743 CAPNS2Q96L46 248 aa6.26□□□□□ -1.41
HMGB1P23-201ENST00000518743 SNX27Q96L92 541 aa6.26□□□□□ -1.41
HMGB1P23-201ENST00000518743 SLC6A18Q96N87 628 aa6.26□□□□□ -1.41
HMGB1P23-201ENST00000518743 CRIM1Q9NZV1 1036 aa6.26□□□□□ -1.41
HMGB1P23-201ENST00000518743 KLHL42Q9P2K6 505 aa6.26□□□□□ -1.41
HMGB1P23-201ENST00000518743 MAGEC2Q9UBF1 373 aaPredicted RBP6.26□□□□□ -1.41
HMGB1P23-201ENST00000518743 STK17AQ9UEE5 414 aa6.26□□□□□ -1.41
HMGB1P23-201ENST00000518743 KIF1BO60333 1816 aa6.26□□□□□ -1.41
HMGB1P23-201ENST00000518743 MEGF6O75095 1541 aa6.25□□□□□ -1.41
HMGB1P23-201ENST00000518743 TRBV23-1A0A0A0MS06 115 aa6.25□□□□□ -1.41
HMGB1P23-201ENST00000518743 NOP56O00567 594 aaKnown RBP6.25□□□□□ -1.41
HMGB1P23-201ENST00000518743 PPM1BO75688 479 aa6.25□□□□□ -1.41
HMGB1P23-201ENST00000518743 MYCLP1P12525 358 aaPredicted RBP6.25□□□□□ -1.41
HMGB1P23-201ENST00000518743 DPEP1P16444 411 aa6.25□□□□□ -1.41
HMGB1P23-201ENST00000518743 TGFB2P61812 414 aa6.25□□□□□ -1.41
HMGB1P23-201ENST00000518743 SUMO1P63165 101 aaKnown RBP6.25□□□□□ -1.41
HMGB1P23-201ENST00000518743 EXOSC10Q01780 885 aaKnown RBP6.25□□□□□ -1.41
HMGB1P23-201ENST00000518743 PABPC4Q13310 644 aaKnown RBP eCLIP6.25□□□□□ -1.41
HMGB1P23-201ENST00000518743 DUOXA2Q1HG44 320 aa6.25□□□□□ -1.41
HMGB1P23-201ENST00000518743 ANKRD39Q53RE8 183 aa6.25□□□□□ -1.41
HMGB1P23-201ENST00000518743 PPM1JQ5JR12 505 aa6.25□□□□□ -1.41
HMGB1P23-201ENST00000518743 AHI1Q8N157 1196 aa6.25□□□□□ -1.41
HMGB1P23-201ENST00000518743 MFSD2AQ8NA29 543 aa6.25□□□□□ -1.41
HMGB1P23-201ENST00000518743 RNF208Q9H0X6 261 aa6.25□□□□□ -1.41
HMGB1P23-201ENST00000518743 SUGCTQ9HAC7 445 aa6.25□□□□□ -1.41
HMGB1P23-201ENST00000518743 PIDD1Q9HB75 910 aa6.25□□□□□ -1.41
HMGB1P23-201ENST00000518743 NCOA5Q9HCD5 579 aaKnown RBP6.25□□□□□ -1.41
HMGB1P23-201ENST00000518743 TJP2Q9UDY2 1190 aa6.25□□□□□ -1.41
HMGB1P23-201ENST00000518743 PCDHB10Q9UN67 800 aa6.25□□□□□ -1.41
HMGB1P23-201ENST00000518743 ATP8A1Q9Y2Q0 1164 aa6.25□□□□□ -1.41
HMGB1P23-201ENST00000518743 PASKQ96RG2 1323 aa6.25□□□□□ -1.41
HMGB1P23-201ENST00000518743 CCDC88AQ3V6T2 1871 aa6.24□□□□□ -1.41
HMGB1P23-201ENST00000518743 TMPRSS2O15393 492 aa6.24□□□□□ -1.41
HMGB1P23-201ENST00000518743 DNAJA2O60884 412 aa6.24□□□□□ -1.41
HMGB1P23-201ENST00000518743 EFCAB14O75071 495 aa6.24□□□□□ -1.41
HMGB1P23-201ENST00000518743 FGFR1P11362 822 aa6.24□□□□□ -1.41
HMGB1P23-201ENST00000518743 AMPD1P23109 780 aa6.24□□□□□ -1.41
HMGB1P23-201ENST00000518743 PLA2G5P39877 138 aa6.24□□□□□ -1.41
HMGB1P23-201ENST00000518743 RASSF7Q02833 373 aa6.24□□□□□ -1.41
HMGB1P23-201ENST00000518743 CYP4F22Q6NT55 531 aa6.24□□□□□ -1.41
HMGB1P23-201ENST00000518743 CCDC144CPQ8IYA2 1237 aa6.24□□□□□ -1.41
HMGB1P23-201ENST00000518743 PPM1KQ8N3J5 372 aa6.24□□□□□ -1.41
HMGB1P23-201ENST00000518743 GALNT6Q8NCL4 622 aa6.24□□□□□ -1.41
HMGB1P23-201ENST00000518743 WDR89Q96FK6 387 aaPredicted RBP6.24□□□□□ -1.41
HMGB1P23-201ENST00000518743 HAUS7Q99871 368 aa6.24□□□□□ -1.41
HMGB1P23-201ENST00000518743 WHRNQ9P202 907 aa6.24□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 87.5 ms