RNA–Protein interactions for RNA: ENST00000517619.5

SPIDR-202, Transcript of scaffold protein involved in DNA repair, humanhuman

APPRIS ALT2 TSL 3

Gene SPIDR, Length 335 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-202ENST00000517619 SCN5AQ14524 2016 aa11.26□□□□□ -0.61
SPIDR-202ENST00000517619 GRXCR1A8MXD5 290 aa11.26□□□□□ -0.61
SPIDR-202ENST00000517619 B4GALT4O60513 344 aa11.26□□□□□ -0.61
SPIDR-202ENST00000517619 CALML3P27482 149 aa11.26□□□□□ -0.61
SPIDR-202ENST00000517619 PBX2P40425 430 aa11.26□□□□□ -0.61
SPIDR-202ENST00000517619 AKNAD1Q5T1N1 836 aa11.26□□□□□ -0.61
SPIDR-202ENST00000517619 RASIP1Q5U651 963 aa11.26□□□□□ -0.61
SPIDR-202ENST00000517619 RNF207Q6ZRF8 634 aa11.26□□□□□ -0.61
SPIDR-202ENST00000517619 ZNF365Q70YC5 407 aa11.26□□□□□ -0.61
SPIDR-202ENST00000517619 TICAM2Q86XR7 235 aa11.26□□□□□ -0.61
SPIDR-202ENST00000517619 SLC43A3Q8NBI5 491 aa11.26□□□□□ -0.61
SPIDR-202ENST00000517619 ZKSCAN3Q9BRR0 538 aa11.26□□□□□ -0.61
SPIDR-202ENST00000517619 PBX4Q9BYU1 374 aa11.26□□□□□ -0.61
SPIDR-202ENST00000517619 HIPK3Q9H422 1215 aa11.26□□□□□ -0.61
SPIDR-202ENST00000517619 ZNF576Q9H609 170 aa11.26□□□□□ -0.61
SPIDR-202ENST00000517619 IL23AQ9NPF7 189 aa11.26□□□□□ -0.61
SPIDR-202ENST00000517619 Q9Y3F1 56 aa11.26□□□□□ -0.61
SPIDR-202ENST00000517619 GRIN2DO15399 1336 aa11.26□□□□□ -0.61
SPIDR-202ENST00000517619 NEDD4P46934 1319 aa11.26□□□□□ -0.61
SPIDR-202ENST00000517619 KIAA1217Q5T5P2 1943 aa11.25□□□□□ -0.61
SPIDR-202ENST00000517619 SCN10AQ9Y5Y9 1956 aa11.25□□□□□ -0.61
SPIDR-202ENST00000517619 PCP11498 1178 aaKnown RBP11.25□□□□□ -0.61
SPIDR-202ENST00000517619 ZNF543Q08ER8 600 aa11.25□□□□□ -0.61
SPIDR-202ENST00000517619 DUSP28Q4G0W2 176 aa11.25□□□□□ -0.61
SPIDR-202ENST00000517619 CLEC4DQ8WXI8 215 aa11.25□□□□□ -0.61
SPIDR-202ENST00000517619 TTC14Q96N46 770 aa11.25□□□□□ -0.61
SPIDR-202ENST00000517619 WDR11Q9BZH6 1224 aa11.25□□□□□ -0.61
SPIDR-202ENST00000517619 TRPV6Q9H1D0 765 aa11.25□□□□□ -0.61
SPIDR-202ENST00000517619 RNF41Q9H4P4 317 aaPredicted RBP11.25□□□□□ -0.61
SPIDR-202ENST00000517619 MUC3AQ02505 3323 aa11.25□□□□□ -0.61
SPIDR-202ENST00000517619 LOC102724159A0A0B4J2E5 919 aa11.24□□□□□ -0.61
SPIDR-202ENST00000517619 MYL3P08590 195 aa11.24□□□□□ -0.61
SPIDR-202ENST00000517619 GOLGA8HP0CJ92 632 aa11.24□□□□□ -0.61
SPIDR-202ENST00000517619 SNHG28P0DPA3 235 aa11.24□□□□□ -0.61
SPIDR-202ENST00000517619 SDSP20132 328 aa11.24□□□□□ -0.61
SPIDR-202ENST00000517619 CPT1AP50416 773 aa11.24□□□□□ -0.61
SPIDR-202ENST00000517619 MFAP1P55081 439 aaKnown RBP11.24□□□□□ -0.61
SPIDR-202ENST00000517619 CCL23P55773 120 aa11.24□□□□□ -0.61
SPIDR-202ENST00000517619 RPS6P62753 249 aaKnown RBP11.24□□□□□ -0.61
SPIDR-202ENST00000517619 PDE4DQ08499 809 aa11.24□□□□□ -0.61
SPIDR-202ENST00000517619 PWP2Q15269 919 aaKnown RBP11.24□□□□□ -0.61
SPIDR-202ENST00000517619 USH1GQ495M9 461 aa11.24□□□□□ -0.61
SPIDR-202ENST00000517619 SMC5Q8IY18 1101 aa11.24□□□□□ -0.61
SPIDR-202ENST00000517619 ESR2Q92731 530 aa11.24□□□□□ -0.61
SPIDR-202ENST00000517619 NOC4LQ9BVI4 516 aaKnown RBP11.24□□□□□ -0.61
SPIDR-202ENST00000517619 SEZ6LQ9BYH1 1024 aa11.24□□□□□ -0.61
SPIDR-202ENST00000517619 WNT8AQ9H1J5 351 aa11.24□□□□□ -0.61
SPIDR-202ENST00000517619 CPVLQ9H3G5 476 aa11.24□□□□□ -0.61
SPIDR-202ENST00000517619 CXXC1Q9P0U4 656 aaPredicted RBP11.24□□□□□ -0.61
SPIDR-202ENST00000517619 PNMA2Q9UL42 364 aa11.24□□□□□ -0.61
SPIDR-202ENST00000517619 WDR19Q8NEZ3 1342 aa11.24□□□□□ -0.61
SPIDR-202ENST00000517619 ZNF213O14771 459 aa11.23□□□□□ -0.61
SPIDR-202ENST00000517619 FGBP02675 491 aa11.23□□□□□ -0.61
SPIDR-202ENST00000517619 PURAQ00577 322 aaKnown RBP11.23□□□□□ -0.61
SPIDR-202ENST00000517619 PPP2R5BQ15173 497 aa11.23□□□□□ -0.61
SPIDR-202ENST00000517619 GPATCH4Q5T3I0 446 aaKnown RBP11.23□□□□□ -0.61
SPIDR-202ENST00000517619 CWC27Q6UX04 472 aaKnown RBP11.23□□□□□ -0.61
SPIDR-202ENST00000517619 OTOP2Q7RTS6 562 aa11.23□□□□□ -0.61
SPIDR-202ENST00000517619 CHD1LQ86WJ1 897 aa11.23□□□□□ -0.61
SPIDR-202ENST00000517619 USP38Q8NB14 1042 aa11.23□□□□□ -0.61
SPIDR-202ENST00000517619 OR6J1Q8NGC5 347 aa11.23□□□□□ -0.61
SPIDR-202ENST00000517619 HERVK_113Q902F9 699 aa11.23□□□□□ -0.61
SPIDR-202ENST00000517619 SCLYQ96I15 445 aa11.23□□□□□ -0.61
SPIDR-202ENST00000517619 YTHDC1Q96MU7 727 aaKnown RBP11.23□□□□□ -0.61
SPIDR-202ENST00000517619 MPHOSPH6Q99547 160 aaKnown RBP11.23□□□□□ -0.61
SPIDR-202ENST00000517619 ALDH8A1Q9H2A2 487 aaPredicted RBP11.23□□□□□ -0.61
SPIDR-202ENST00000517619 MTIF3Q9H2K0 278 aaKnown RBP11.23□□□□□ -0.61
SPIDR-202ENST00000517619 TRMT13Q9NUP7 481 aaKnown RBP11.23□□□□□ -0.61
SPIDR-202ENST00000517619 POLR3EQ9NVU0 708 aa11.23□□□□□ -0.61
SPIDR-202ENST00000517619 MYO9BQ13459 2157 aa11.23□□□□□ -0.61
SPIDR-202ENST00000517619 RBM47A0AV96 593 aaKnown RBP11.22□□□□□ -0.61
SPIDR-202ENST00000517619 KDM4AO75164 1064 aa11.22□□□□□ -0.61
SPIDR-202ENST00000517619 TNKSO95271 1327 aa11.22□□□□□ -0.61
SPIDR-202ENST00000517619 AAMPQ13685 434 aa11.22□□□□□ -0.61
SPIDR-202ENST00000517619 RAB30Q15771 203 aa11.22□□□□□ -0.61
SPIDR-202ENST00000517619 CDC37Q16543 378 aaPredicted RBP11.22□□□□□ -0.61
SPIDR-202ENST00000517619 FAM47CQ5HY64 1035 aa11.22□□□□□ -0.61
SPIDR-202ENST00000517619 IQCA1Q86XH1 822 aa11.22□□□□□ -0.61
SPIDR-202ENST00000517619 PLEKHM2Q8IWE5 1019 aa11.22□□□□□ -0.61
SPIDR-202ENST00000517619 PNMA1Q8ND90 353 aa11.22□□□□□ -0.61
SPIDR-202ENST00000517619 DNERQ8NFT8 737 aa11.22□□□□□ -0.61
SPIDR-202ENST00000517619 SCFD2Q8WU76 684 aa11.22□□□□□ -0.61
SPIDR-202ENST00000517619 PPP1R13LQ8WUF5 828 aa11.22□□□□□ -0.61
SPIDR-202ENST00000517619 RAD50Q92878 1312 aa11.22□□□□□ -0.61
SPIDR-202ENST00000517619 GAS2L1Q99501 681 aaPredicted RBP11.22□□□□□ -0.61
SPIDR-202ENST00000517619 RWDD1Q9H446 243 aaPredicted RBP11.22□□□□□ -0.61
SPIDR-202ENST00000517619 PRDM12Q9H4Q4 367 aa11.22□□□□□ -0.61
SPIDR-202ENST00000517619 GPHNQ9NQX3 736 aaPredicted RBP11.22□□□□□ -0.61
SPIDR-202ENST00000517619 DIAPH3Q9NSV4 1193 aa11.22□□□□□ -0.61
SPIDR-202ENST00000517619 MSRAQ9UJ68 235 aa11.22□□□□□ -0.61
SPIDR-202ENST00000517619 TRIP12Q14669 1992 aaPredicted RBP11.21□□□□□ -0.61
SPIDR-202ENST00000517619 CHD9Q3L8U1 2897 aa11.21□□□□□ -0.61
SPIDR-202ENST00000517619 B4E1Z4 1266 aa11.21□□□□□ -0.61
SPIDR-202ENST00000517619 NKRFO15226 690 aaKnown RBP eCLIP11.21□□□□□ -0.61
SPIDR-202ENST00000517619 IGHDP01880 384 aa11.21□□□□□ -0.61
SPIDR-202ENST00000517619 CYP2C9P11712 490 aa11.21□□□□□ -0.61
SPIDR-202ENST00000517619 EDNRBP24530 442 aa11.21□□□□□ -0.61
SPIDR-202ENST00000517619 NUCB1Q02818 461 aa11.21□□□□□ -0.61
SPIDR-202ENST00000517619 DGKHQ86XP1 1220 aa11.21□□□□□ -0.61
SPIDR-202ENST00000517619 RPUSD2Q8IZ73 545 aaKnown RBP11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms