RNA–Protein interactions for RNA: ENST00000516538.1

RNU6-1046P-201, Transcript of RNA, U6 small nuclear 1046, pseudogene, humanhuman

BASIC

Gene RNU6-1046P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1046P-201ENST00000516538 INHBEP58166 350 aa4.73□□□□□ -1.65
RNU6-1046P-201ENST00000516538 ICAM4Q14773 271 aa4.73□□□□□ -1.65
RNU6-1046P-201ENST00000516538 CIR1Q86X95 450 aaPredicted RBP4.73□□□□□ -1.65
RNU6-1046P-201ENST00000516538 FBXO27Q8NI29 283 aa4.73□□□□□ -1.65
RNU6-1046P-201ENST00000516538 ATG4CQ96DT6 458 aa4.73□□□□□ -1.65
RNU6-1046P-201ENST00000516538 DDX11Q96FC9 970 aa4.73□□□□□ -1.65
RNU6-1046P-201ENST00000516538 RSRP1Q9BUV0 290 aa4.73□□□□□ -1.65
RNU6-1046P-201ENST00000516538 ZNF341Q9BYN7 854 aa4.73□□□□□ -1.65
RNU6-1046P-201ENST00000516538 BCAS3Q9H6U6 928 aa4.73□□□□□ -1.65
RNU6-1046P-201ENST00000516538 USP31Q70CQ4 1352 aa4.73□□□□□ -1.65
RNU6-1046P-201ENST00000516538 MUSKO15146 869 aa4.72□□□□□ -1.65
RNU6-1046P-201ENST00000516538 FHL2Q14192 279 aa4.72□□□□□ -1.65
RNU6-1046P-201ENST00000516538 LRRFIP1Q32MZ4 808 aaKnown RBP4.72□□□□□ -1.65
RNU6-1046P-201ENST00000516538 NOL9Q5SY16 702 aaKnown RBP4.72□□□□□ -1.65
RNU6-1046P-201ENST00000516538 MCTP2Q6DN12 878 aa4.72□□□□□ -1.65
RNU6-1046P-201ENST00000516538 CCDC144CPQ8IYA2 1237 aa4.72□□□□□ -1.65
RNU6-1046P-201ENST00000516538 C7orf61Q8IZ16 206 aa4.72□□□□□ -1.65
RNU6-1046P-201ENST00000516538 LZTR1Q8N653 840 aa4.72□□□□□ -1.65
RNU6-1046P-201ENST00000516538 TTLL6Q8N841 843 aa4.72□□□□□ -1.65
RNU6-1046P-201ENST00000516538 KYQ8NBH2 561 aa4.72□□□□□ -1.65
RNU6-1046P-201ENST00000516538 DHRS1Q96LJ7 313 aa4.72□□□□□ -1.65
RNU6-1046P-201ENST00000516538 PTCHD1Q96NR3 888 aa4.72□□□□□ -1.65
RNU6-1046P-201ENST00000516538 LRRC3Q9BY71 257 aa4.72□□□□□ -1.65
RNU6-1046P-201ENST00000516538 BRMS1Q9HCU9 246 aa4.72□□□□□ -1.65
RNU6-1046P-201ENST00000516538 ING1Q9UK53 422 aaPredicted RBP4.72□□□□□ -1.65
RNU6-1046P-201ENST00000516538 WDR33Q9C0J8 1336 aaKnown RBP4.72□□□□□ -1.65
RNU6-1046P-201ENST00000516538 C9orf118A6NHY6 69 aa4.71□□□□□ -1.66
RNU6-1046P-201ENST00000516538 MINDY4BA8MYZ0 360 aa4.71□□□□□ -1.66
RNU6-1046P-201ENST00000516538 H0Y8X5 98 aa4.71□□□□□ -1.66
RNU6-1046P-201ENST00000516538 EAPPQ56P03 285 aaPredicted RBP4.71□□□□□ -1.66
RNU6-1046P-201ENST00000516538 C9orf131Q5VYM1 1079 aa4.71□□□□□ -1.66
RNU6-1046P-201ENST00000516538 ZNF585AQ6P3V2 769 aa4.71□□□□□ -1.66
RNU6-1046P-201ENST00000516538 TMEM192Q8IY95 271 aa4.71□□□□□ -1.66
RNU6-1046P-201ENST00000516538 C11orf84Q9BUA3 381 aaPredicted RBP4.71□□□□□ -1.66
RNU6-1046P-201ENST00000516538 RXFP1Q9HBX9 757 aa4.71□□□□□ -1.66
RNU6-1046P-201ENST00000516538 SF3B6Q9Y3B4 125 aaKnown RBP4.71□□□□□ -1.66
RNU6-1046P-201ENST00000516538 NME1P15531 152 aaKnown RBP4.7□□□□□ -1.66
RNU6-1046P-201ENST00000516538 XPCQ01831 940 aaPredicted RBP4.7□□□□□ -1.66
RNU6-1046P-201ENST00000516538 POU4F1Q01851 419 aa4.7□□□□□ -1.66
RNU6-1046P-201ENST00000516538 ZC3H18Q86VM9 953 aaKnown RBP4.7□□□□□ -1.66
RNU6-1046P-201ENST00000516538 TXNDC5Q8NBS9 432 aaKnown RBP4.7□□□□□ -1.66
RNU6-1046P-201ENST00000516538 SMARCC1Q92922 1105 aaPredicted RBP4.7□□□□□ -1.66
RNU6-1046P-201ENST00000516538 GORASP1Q9BQQ3 440 aa4.7□□□□□ -1.66
RNU6-1046P-201ENST00000516538 CD248Q9HCU0 757 aa4.7□□□□□ -1.66
RNU6-1046P-201ENST00000516538 JADE2Q9NQC1 790 aa4.7□□□□□ -1.66
RNU6-1046P-201ENST00000516538 PPP4R1LQ9P1A2 415 aa4.7□□□□□ -1.66
RNU6-1046P-201ENST00000516538 SUPT16HQ9Y5B9 1047 aaKnown RBP4.7□□□□□ -1.66
RNU6-1046P-201ENST00000516538 TNFRSF10CO14798 259 aa4.69□□□□□ -1.66
RNU6-1046P-201ENST00000516538 CD3EP07766 207 aa4.69□□□□□ -1.66
RNU6-1046P-201ENST00000516538 TGM1P22735 817 aa4.69□□□□□ -1.66
RNU6-1046P-201ENST00000516538 ITGAEP38570 1179 aa4.69□□□□□ -1.66
RNU6-1046P-201ENST00000516538 ETV3LQ6ZN32 361 aa4.69□□□□□ -1.66
RNU6-1046P-201ENST00000516538 USP33Q8TEY7 942 aa4.69□□□□□ -1.66
RNU6-1046P-201ENST00000516538 EHMT1Q9H9B1 1298 aa4.69□□□□□ -1.66
RNU6-1046P-201ENST00000516538 SUCOQ9UBS9 1254 aaKnown RBP4.69□□□□□ -1.66
RNU6-1046P-201ENST00000516538 PARP2Q9UGN5 583 aa4.69□□□□□ -1.66
RNU6-1046P-201ENST00000516538 LTBP3Q9NS15 1303 aa4.69□□□□□ -1.66
RNU6-1046P-201ENST00000516538 CYP1A1P04798 512 aaPredicted RBP4.68□□□□□ -1.66
RNU6-1046P-201ENST00000516538 C8BP07358 591 aa4.68□□□□□ -1.66
RNU6-1046P-201ENST00000516538 DAB2P98082 770 aa4.68□□□□□ -1.66
RNU6-1046P-201ENST00000516538 ABHD18Q0P651 414 aa4.68□□□□□ -1.66
RNU6-1046P-201ENST00000516538 SPDYAQ5MJ70 313 aa4.68□□□□□ -1.66
RNU6-1046P-201ENST00000516538 WWC2Q6AWC2 1192 aa4.68□□□□□ -1.66
RNU6-1046P-201ENST00000516538 ARHGEF18Q6ZSZ5 1173 aa4.68□□□□□ -1.66
RNU6-1046P-201ENST00000516538 DNERQ8NFT8 737 aa4.68□□□□□ -1.66
RNU6-1046P-201ENST00000516538 RNF19AQ9NV58 838 aa4.68□□□□□ -1.66
RNU6-1046P-201ENST00000516538 RWDD3Q9Y3V2 267 aa4.68□□□□□ -1.66
RNU6-1046P-201ENST00000516538 TESMINQ9Y4I5 508 aa4.68□□□□□ -1.66
RNU6-1046P-201ENST00000516538 DDX3XO00571 662 aaKnown RBP eCLIP4.67□□□□□ -1.66
RNU6-1046P-201ENST00000516538 GARTP22102 1010 aa4.67□□□□□ -1.66
RNU6-1046P-201ENST00000516538 HS1BP3Q53T59 392 aa4.67□□□□□ -1.66
RNU6-1046P-201ENST00000516538 PRAMEF18Q5VWM3 479 aa4.67□□□□□ -1.66
RNU6-1046P-201ENST00000516538 EEF1DP3Q658K8 133 aa4.67□□□□□ -1.66
RNU6-1046P-201ENST00000516538 ZNF575Q86XF7 245 aa4.67□□□□□ -1.66
RNU6-1046P-201ENST00000516538 DCP2Q8IU60 420 aaKnown RBP4.67□□□□□ -1.66
RNU6-1046P-201ENST00000516538 FIBCD1Q8N539 461 aa4.67□□□□□ -1.66
RNU6-1046P-201ENST00000516538 FCRL3Q96P31 734 aaPredicted RBP4.67□□□□□ -1.66
RNU6-1046P-201ENST00000516538 FHOD1Q9Y613 1164 aa4.67□□□□□ -1.66
RNU6-1046P-201ENST00000516538 MEIS3P2A8K0S8 358 aa4.66□□□□□ -1.66
RNU6-1046P-201ENST00000516538 GPR42O15529 346 aa4.66□□□□□ -1.66
RNU6-1046P-201ENST00000516538 B4GALT3O60512 393 aa4.66□□□□□ -1.66
RNU6-1046P-201ENST00000516538 PPFIA2O75334 1257 aa4.66□□□□□ -1.66
RNU6-1046P-201ENST00000516538 CTSHP09668 335 aa4.66□□□□□ -1.66
RNU6-1046P-201ENST00000516538 ITGA4P13612 1032 aa4.66□□□□□ -1.66
RNU6-1046P-201ENST00000516538 IFNGR1P15260 489 aa4.66□□□□□ -1.66
RNU6-1046P-201ENST00000516538 ZNF165P49910 485 aa4.66□□□□□ -1.66
RNU6-1046P-201ENST00000516538 RCSD1Q6JBY9 416 aa4.66□□□□□ -1.66
RNU6-1046P-201ENST00000516538 CD300LDQ6UXZ3 194 aa4.66□□□□□ -1.66
RNU6-1046P-201ENST00000516538 GK5Q6ZS86 529 aa4.66□□□□□ -1.66
RNU6-1046P-201ENST00000516538 REXO1Q8N1G1 1221 aaKnown RBP4.66□□□□□ -1.66
RNU6-1046P-201ENST00000516538 IGDCC4Q8TDY8 1250 aa4.66□□□□□ -1.66
RNU6-1046P-201ENST00000516538 AP5M1Q9H0R1 490 aa4.66□□□□□ -1.66
RNU6-1046P-201ENST00000516538 NGRNQ9NPE2 291 aaKnown RBP4.66□□□□□ -1.66
RNU6-1046P-201ENST00000516538 IVNS1ABPQ9Y6Y0 642 aa4.66□□□□□ -1.66
RNU6-1046P-201ENST00000516538 SHOXO15266 292 aa4.65□□□□□ -1.67
RNU6-1046P-201ENST00000516538 MCM4P33991 863 aa4.65□□□□□ -1.67
RNU6-1046P-201ENST00000516538 PMS1P54277 932 aaKnown RBP4.65□□□□□ -1.67
RNU6-1046P-201ENST00000516538 EPHB4P54760 987 aa4.65□□□□□ -1.67
RNU6-1046P-201ENST00000516538 ZNF445P59923 1031 aa4.65□□□□□ -1.67
RNU6-1046P-201ENST00000516538 PPP2CBP62714 309 aa4.65□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms