RNA–Protein interactions for RNA: ENST00000515918.1

RNU6-488P-201, Transcript of RNA, U6 small nuclear 488, pseudogene, humanhuman

BASIC

Gene RNU6-488P, Length 99 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-488P-201ENST00000515918 IFNGR1P15260 489 aa5.6□□□□□ -1.51
RNU6-488P-201ENST00000515918 ATP2A2P16615 1042 aaKnown RBP5.6□□□□□ -1.51
RNU6-488P-201ENST00000515918 YBX3P16989 372 aaKnown RBP eCLIP5.6□□□□□ -1.51
RNU6-488P-201ENST00000515918 NAT1P18440 290 aa5.6□□□□□ -1.51
RNU6-488P-201ENST00000515918 CDK5R2Q13319 367 aa5.6□□□□□ -1.51
RNU6-488P-201ENST00000515918 TCIRG1Q13488 830 aa5.6□□□□□ -1.51
RNU6-488P-201ENST00000515918 PCBP2Q15366 365 aaKnown RBP eCLIP5.6□□□□□ -1.51
RNU6-488P-201ENST00000515918 ATP13A4Q4VNC1 1196 aa5.6□□□□□ -1.51
RNU6-488P-201ENST00000515918 CREB3L3Q68CJ9 461 aa5.6□□□□□ -1.51
RNU6-488P-201ENST00000515918 TMED8Q6PL24 325 aaPredicted RBP5.6□□□□□ -1.51
RNU6-488P-201ENST00000515918 CRTC3Q6UUV7 619 aa5.6□□□□□ -1.51
RNU6-488P-201ENST00000515918 SHISA2Q6UWI4 295 aa5.6□□□□□ -1.51
RNU6-488P-201ENST00000515918 KSR2Q6VAB6 950 aa5.6□□□□□ -1.51
RNU6-488P-201ENST00000515918 LBX2Q6XYB7 198 aa5.6□□□□□ -1.51
RNU6-488P-201ENST00000515918 FAM214BQ7L5A3 538 aa5.6□□□□□ -1.51
RNU6-488P-201ENST00000515918 OVCH1Q7RTY7 1134 aa5.6□□□□□ -1.51
RNU6-488P-201ENST00000515918 ZC3H7AQ8IWR0 971 aaKnown RBP5.6□□□□□ -1.51
RNU6-488P-201ENST00000515918 TPH2Q8IWU9 490 aa5.6□□□□□ -1.51
RNU6-488P-201ENST00000515918 DTWD2Q8NBA8 298 aa5.6□□□□□ -1.51
RNU6-488P-201ENST00000515918 PUM2Q8TB72 1066 aaKnown RBP eCLIP5.6□□□□□ -1.51
RNU6-488P-201ENST00000515918 FBLIM1Q8WUP2 373 aa5.6□□□□□ -1.51
RNU6-488P-201ENST00000515918 EZH1Q92800 747 aaPredicted RBP5.6□□□□□ -1.51
RNU6-488P-201ENST00000515918 FCRL3Q96P31 734 aaPredicted RBP5.6□□□□□ -1.51
RNU6-488P-201ENST00000515918 PCGF6Q9BYE7 350 aa5.6□□□□□ -1.51
RNU6-488P-201ENST00000515918 TCF7L1Q9HCS4 588 aa5.6□□□□□ -1.51
RNU6-488P-201ENST00000515918 ENAMQ9NRM1 1142 aa5.6□□□□□ -1.51
RNU6-488P-201ENST00000515918 C1GALT1Q9NS00 363 aa5.6□□□□□ -1.51
RNU6-488P-201ENST00000515918 THG1LQ9NWX6 298 aaKnown RBP5.6□□□□□ -1.51
RNU6-488P-201ENST00000515918 LUC7L2Q9Y383 392 aaKnown RBP5.6□□□□□ -1.51
RNU6-488P-201ENST00000515918 C2orf71A6NGG8 1288 aa5.59□□□□□ -1.51
RNU6-488P-201ENST00000515918 LEFTY1O75610 366 aa5.59□□□□□ -1.51
RNU6-488P-201ENST00000515918 GSNP06396 782 aa5.59□□□□□ -1.51
RNU6-488P-201ENST00000515918 CD3EP07766 207 aa5.59□□□□□ -1.51
RNU6-488P-201ENST00000515918 SRGAP2CP0DJJ0 459 aa5.59□□□□□ -1.51
RNU6-488P-201ENST00000515918 MYBL2P10244 700 aa5.59□□□□□ -1.51
RNU6-488P-201ENST00000515918 PLS3P13797 630 aa5.59□□□□□ -1.51
RNU6-488P-201ENST00000515918 GRIK1P39086 918 aa5.59□□□□□ -1.51
RNU6-488P-201ENST00000515918 USP11P51784 963 aa5.59□□□□□ -1.51
RNU6-488P-201ENST00000515918 POU4F1Q01851 419 aa5.59□□□□□ -1.51
RNU6-488P-201ENST00000515918 NMIQ13287 307 aaPredicted RBP5.59□□□□□ -1.51
RNU6-488P-201ENST00000515918 SART3Q15020 963 aaKnown RBP5.59□□□□□ -1.51
RNU6-488P-201ENST00000515918 GFOD2Q3B7J2 385 aa5.59□□□□□ -1.51
RNU6-488P-201ENST00000515918 TMEM177Q53S58 311 aa5.59□□□□□ -1.51
RNU6-488P-201ENST00000515918 PPP4R4Q6NUP7 873 aa5.59□□□□□ -1.51
RNU6-488P-201ENST00000515918 SLC4A10Q6U841 1118 aa5.59□□□□□ -1.51
RNU6-488P-201ENST00000515918 TSHZ1Q6ZSZ6 1077 aa5.59□□□□□ -1.51
RNU6-488P-201ENST00000515918 DGKHQ86XP1 1220 aa5.59□□□□□ -1.51
RNU6-488P-201ENST00000515918 SAMD3Q8N6K7 520 aa5.59□□□□□ -1.51
RNU6-488P-201ENST00000515918 TOP6BLQ8N6T0 577 aa5.59□□□□□ -1.51
RNU6-488P-201ENST00000515918 MPHOSPH6Q99547 160 aaKnown RBP5.59□□□□□ -1.51
RNU6-488P-201ENST00000515918 CELF4Q9BZC1 486 aaKnown RBP5.59□□□□□ -1.51
RNU6-488P-201ENST00000515918 SLC13A1Q9BZW2 595 aa5.59□□□□□ -1.51
RNU6-488P-201ENST00000515918 ZNF700Q9H0M5 742 aa5.59□□□□□ -1.51
RNU6-488P-201ENST00000515918 LUC7LQ9NQ29 371 aaKnown RBP5.59□□□□□ -1.51
RNU6-488P-201ENST00000515918 OBP2AQ9NY56 170 aa5.59□□□□□ -1.51
RNU6-488P-201ENST00000515918 H2AFY2Q9P0M6 372 aaPredicted RBP5.59□□□□□ -1.51
RNU6-488P-201ENST00000515918 RNF112Q9ULX5 631 aa5.59□□□□□ -1.51
RNU6-488P-201ENST00000515918 BACE2Q9Y5Z0 518 aa5.59□□□□□ -1.51
RNU6-488P-201ENST00000515918 COMMD10Q9Y6G5 202 aa5.59□□□□□ -1.51
RNU6-488P-201ENST00000515918 GOLGA6CA6NDK9 693 aa5.58□□□□□ -1.52
RNU6-488P-201ENST00000515918 GOLGA6BA6NDN3 693 aa5.58□□□□□ -1.52
RNU6-488P-201ENST00000515918 VSTM5A8MXK1 200 aa5.58□□□□□ -1.52
RNU6-488P-201ENST00000515918 WNT9AO14904 365 aa5.58□□□□□ -1.52
RNU6-488P-201ENST00000515918 MEFVO15553 781 aaPredicted RBP5.58□□□□□ -1.52
RNU6-488P-201ENST00000515918 GAS7O60861 476 aa5.58□□□□□ -1.52
RNU6-488P-201ENST00000515918 LDHAP00338 332 aaKnown RBP5.58□□□□□ -1.52
RNU6-488P-201ENST00000515918 MT-CO1P00395 513 aa5.58□□□□□ -1.52
RNU6-488P-201ENST00000515918 GOLGA6DP0CG33 693 aa5.58□□□□□ -1.52
RNU6-488P-201ENST00000515918 ELNP15502 786 aa5.58□□□□□ -1.52
RNU6-488P-201ENST00000515918 LTBRP36941 435 aa5.58□□□□□ -1.52
RNU6-488P-201ENST00000515918 SNRPNP63162 240 aaKnown RBP5.58□□□□□ -1.52
RNU6-488P-201ENST00000515918 TRIM28Q13263 835 aaKnown RBP5.58□□□□□ -1.52
RNU6-488P-201ENST00000515918 HDAC1Q13547 482 aaPredicted RBP5.58□□□□□ -1.52
RNU6-488P-201ENST00000515918 SGO2Q562F6 1265 aa5.58□□□□□ -1.52
RNU6-488P-201ENST00000515918 CXorf57Q6NSI4 855 aaKnown RBP5.58□□□□□ -1.52
RNU6-488P-201ENST00000515918 Q6ZNB5 142 aa5.58□□□□□ -1.52
RNU6-488P-201ENST00000515918 Q6ZS46 218 aa5.58□□□□□ -1.52
RNU6-488P-201ENST00000515918 CHST14Q8NCH0 376 aa5.58□□□□□ -1.52
RNU6-488P-201ENST00000515918 CLRN3Q8NCR9 226 aa5.58□□□□□ -1.52
RNU6-488P-201ENST00000515918 RCBTB1Q8NDN9 531 aa5.58□□□□□ -1.52
RNU6-488P-201ENST00000515918 SVIPQ8NHG7 77 aa5.58□□□□□ -1.52
RNU6-488P-201ENST00000515918 EVI5LQ96CN4 794 aa5.58□□□□□ -1.52
RNU6-488P-201ENST00000515918 FAM46AQ96IP4 442 aaKnown RBP5.58□□□□□ -1.52
RNU6-488P-201ENST00000515918 UBL7Q96S82 380 aaPredicted RBP5.58□□□□□ -1.52
RNU6-488P-201ENST00000515918 DUSP23Q9BVJ7 150 aa5.58□□□□□ -1.52
RNU6-488P-201ENST00000515918 SLC12A9Q9BXP2 914 aa5.58□□□□□ -1.52
RNU6-488P-201ENST00000515918 HDAC8Q9BY41 377 aa5.58□□□□□ -1.52
RNU6-488P-201ENST00000515918 RRAGCQ9HB90 399 aa5.58□□□□□ -1.52
RNU6-488P-201ENST00000515918 GOLGA6AQ9NYA3 693 aa5.58□□□□□ -1.52
RNU6-488P-201ENST00000515918 CLEC1BQ9P126 229 aa5.58□□□□□ -1.52
RNU6-488P-201ENST00000515918 TPX2Q9ULW0 747 aaKnown RBP5.58□□□□□ -1.52
RNU6-488P-201ENST00000515918 PTPDC1A2A3K4 754 aa5.57□□□□□ -1.52
RNU6-488P-201ENST00000515918 PRR33A8MZF0 331 aa5.57□□□□□ -1.52
RNU6-488P-201ENST00000515918 TGM5O43548 720 aa5.57□□□□□ -1.52
RNU6-488P-201ENST00000515918 CREB3O43889 395 aa5.57□□□□□ -1.52
RNU6-488P-201ENST00000515918 CBX7O95931 251 aa5.57□□□□□ -1.52
RNU6-488P-201ENST00000515918 CYP7A1P22680 504 aa5.57□□□□□ -1.52
RNU6-488P-201ENST00000515918 PAK1Q13153 545 aa5.57□□□□□ -1.52
RNU6-488P-201ENST00000515918 KLF1Q13351 362 aaPredicted RBP5.57□□□□□ -1.52
RNU6-488P-201ENST00000515918 ODF1Q14990 250 aa5.57□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 73.4 ms