RNA–Protein interactions for RNA: ENST00000515710.1

TRIO-223, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 3

Gene TRIO, Length 1,913 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-223ENST00000515710 POTEDQ86YR6 584 aa22.77■■□□□ 1.24
TRIO-223ENST00000515710 DDX55Q8NHQ9 600 aaKnown RBP eCLIP22.77■■□□□ 1.24
TRIO-223ENST00000515710 ZC3H15Q8WU90 426 aaKnown RBP22.77■■□□□ 1.24
TRIO-223ENST00000515710 SPDYE3A6NKU9 549 aa22.76■■□□□ 1.23
TRIO-223ENST00000515710 TDP2O95551 362 aa22.76■■□□□ 1.23
TRIO-223ENST00000515710 SH3RF1Q7Z6J0 888 aa22.76■■□□□ 1.23
TRIO-223ENST00000515710 PCDHA5Q9Y5H7 936 aa22.76■■□□□ 1.23
TRIO-223ENST00000515710 CYP3A7-CYP3A51PA0A087WV96 503 aa22.76■■□□□ 1.23
TRIO-223ENST00000515710 OPLAHO14841 1288 aa22.76■■□□□ 1.23
TRIO-223ENST00000515710 FDX1P10109 184 aa22.76■■□□□ 1.23
TRIO-223ENST00000515710 CYP3A7P24462 503 aa22.76■■□□□ 1.23
TRIO-223ENST00000515710 UBA7P41226 1012 aa22.76■■□□□ 1.23
TRIO-223ENST00000515710 C11orf57Q6ZUT1 292 aaPredicted RBP22.76■■□□□ 1.23
TRIO-223ENST00000515710 C12orf42Q96LP6 360 aa22.76■■□□□ 1.23
TRIO-223ENST00000515710 CCDC39Q9UFE4 941 aa22.76■■□□□ 1.23
TRIO-223ENST00000515710 DDX25Q9UHL0 483 aaKnown RBP22.76■■□□□ 1.23
TRIO-223ENST00000515710 PNMA2Q9UL42 364 aa22.76■■□□□ 1.23
TRIO-223ENST00000515710 GLTPD2A6NH11 291 aa22.75■■□□□ 1.23
TRIO-223ENST00000515710 ICAM1P05362 532 aa22.75■■□□□ 1.23
TRIO-223ENST00000515710 VCAM1P19320 739 aa22.75■■□□□ 1.23
TRIO-223ENST00000515710 FXR2P51116 673 aaKnown RBP eCLIP22.75■■□□□ 1.232e-11■■■■■ 45.8
TRIO-223ENST00000515710 E2F4Q16254 413 aa22.75■■□□□ 1.23
TRIO-223ENST00000515710 NT5DC1Q5TFE4 455 aa22.75■■□□□ 1.23
TRIO-223ENST00000515710 LDHDQ86WU2 507 aa22.75■■□□□ 1.23
TRIO-223ENST00000515710 PDLIM2Q96JY6 352 aa22.75■■□□□ 1.23
TRIO-223ENST00000515710 ZHX2Q9Y6X8 837 aa22.75■■□□□ 1.23
TRIO-223ENST00000515710 FOXN1O15353 648 aa22.74■■□□□ 1.23
TRIO-223ENST00000515710 SLC37A4O43826 429 aa22.74■■□□□ 1.23
TRIO-223ENST00000515710 EPHX2P34913 555 aa22.74■■□□□ 1.23
TRIO-223ENST00000515710 IQCB1Q15051 598 aa22.74■■□□□ 1.23
TRIO-223ENST00000515710 TMEM266Q2M3C6 531 aa22.74■■□□□ 1.23
TRIO-223ENST00000515710 LUZP1Q86V48 1076 aa22.74■■□□□ 1.23
TRIO-223ENST00000515710 CRYGNQ8WXF5 182 aa22.74■■□□□ 1.23
TRIO-223ENST00000515710 SMARCE1Q969G3 411 aa22.74■■□□□ 1.23
TRIO-223ENST00000515710 PAGE5Q96GU1 130 aa22.74■■□□□ 1.23
TRIO-223ENST00000515710 BPIFA3Q9BQP9 254 aa22.74■■□□□ 1.23
TRIO-223ENST00000515710 RAB34Q9BZG1 259 aa22.74■■□□□ 1.23
TRIO-223ENST00000515710 FZD1Q9UP38 647 aa22.74■■□□□ 1.23
TRIO-223ENST00000515710 GCOM1H8Y6P7 765 aaPredicted RBP22.74■■□□□ 1.23
TRIO-223ENST00000515710 PPP1R12BO60237 982 aaPredicted RBP22.74■■□□□ 1.23
TRIO-223ENST00000515710 SMC2O95347 1197 aa22.74■■□□□ 1.23
TRIO-223ENST00000515710 POLR2MP0CAP2 368 aa22.74■■□□□ 1.23
TRIO-223ENST00000515710 SARSP49591 514 aaKnown RBP22.74■■□□□ 1.23
TRIO-223ENST00000515710 MAP3K9P80192 1104 aa22.74■■□□□ 1.23
TRIO-223ENST00000515710 PDIA5Q14554 519 aa22.74■■□□□ 1.23
TRIO-223ENST00000515710 IGSF22Q8N9C0 903 aa22.74■■□□□ 1.23
TRIO-223ENST00000515710 MBOAT7Q96N66 472 aa22.74■■□□□ 1.23
TRIO-223ENST00000515710 TANGO6Q9C0B7 1094 aa22.74■■□□□ 1.23
TRIO-223ENST00000515710 RPAP3Q9H6T3 665 aaPredicted RBP22.74■■□□□ 1.23
TRIO-223ENST00000515710 PPP1R9AQ9ULJ8 1098 aa22.74■■□□□ 1.23
TRIO-223ENST00000515710 BIN1O00499 593 aa22.73■■□□□ 1.23
TRIO-223ENST00000515710 SREBF1P36956 1147 aa22.73■■□□□ 1.23
TRIO-223ENST00000515710 TECP42680 631 aa22.73■■□□□ 1.23
TRIO-223ENST00000515710 TXKP42681 527 aa22.73■■□□□ 1.23
TRIO-223ENST00000515710 ARHGAP4P98171 946 aa22.73■■□□□ 1.23
TRIO-223ENST00000515710 SAMD1Q6SPF0 538 aaPredicted RBP22.73■■□□□ 1.23
TRIO-223ENST00000515710 KRT26Q7Z3Y9 468 aa22.73■■□□□ 1.23
TRIO-223ENST00000515710 TRIML1Q8N9V2 468 aa22.73■■□□□ 1.23
TRIO-223ENST00000515710 SPATA20Q8TB22 786 aa22.73■■□□□ 1.23
TRIO-223ENST00000515710 DISC1Q9NRI5 854 aa22.73■■□□□ 1.23
TRIO-223ENST00000515710 ADM5C9JUS6 153 aa22.72■■□□□ 1.23
TRIO-223ENST00000515710 CABP7Q86V35 215 aa22.72■■□□□ 1.23
TRIO-223ENST00000515710 SLC38A10Q9HBR0 1119 aa22.72■■□□□ 1.23
TRIO-223ENST00000515710 ZNF536O15090 1300 aa22.72■■□□□ 1.23
TRIO-223ENST00000515710 GOLGA6L19H0YKK7 550 aa22.72■■□□□ 1.23
TRIO-223ENST00000515710 FLOT1O75955 427 aa22.72■■□□□ 1.23
TRIO-223ENST00000515710 PRR29P0C7W0 189 aa22.72■■□□□ 1.23
TRIO-223ENST00000515710 CDC25AP30304 524 aa22.72■■□□□ 1.23
TRIO-223ENST00000515710 DPCR1Q3MIW9 517 aa22.72■■□□□ 1.23
TRIO-223ENST00000515710 RRAGBQ5VZM2 374 aa22.72■■□□□ 1.23
TRIO-223ENST00000515710 PDXDC2PQ6P474 469 aa22.72■■□□□ 1.23
TRIO-223ENST00000515710 P2RX7Q99572 595 aaKnown RBP22.72■■□□□ 1.23
TRIO-223ENST00000515710 EHMT1Q9H9B1 1298 aa22.72■■□□□ 1.23
TRIO-223ENST00000515710 CCPG1Q9ULG6 757 aa22.72■■□□□ 1.23
TRIO-223ENST00000515710 A0A087WWV3 80 aa22.71■■□□□ 1.23
TRIO-223ENST00000515710 BECN2A8MW95 431 aa22.71■■□□□ 1.23
TRIO-223ENST00000515710 ZBED4O75132 1171 aa22.71■■□□□ 1.23
TRIO-223ENST00000515710 CFBP00751 764 aa22.71■■□□□ 1.23
TRIO-223ENST00000515710 CYP3A4P08684 503 aa22.71■■□□□ 1.23
TRIO-223ENST00000515710 TAL1P17542 331 aaPredicted RBP22.71■■□□□ 1.23
TRIO-223ENST00000515710 STAT6P42226 847 aa22.71■■□□□ 1.23
TRIO-223ENST00000515710 PRKG1Q13976 671 aa22.71■■□□□ 1.23
TRIO-223ENST00000515710 KARSQ15046 597 aaKnown RBP22.71■■□□□ 1.23
TRIO-223ENST00000515710 CUEDC2Q9H467 287 aa22.71■■□□□ 1.23
TRIO-223ENST00000515710 AFG3L2Q9Y4W6 797 aa22.71■■□□□ 1.23
TRIO-223ENST00000515710 IQCA1LA6NCM1 817 aa22.7■■□□□ 1.23
TRIO-223ENST00000515710 MARCH6O60337 910 aa22.7■■□□□ 1.23
TRIO-223ENST00000515710 HOXA13P31271 388 aaPredicted RBP22.7■■□□□ 1.23
TRIO-223ENST00000515710 CIITAP33076 1130 aa22.7■■□□□ 1.23
TRIO-223ENST00000515710 AFMP43652 599 aa22.7■■□□□ 1.23
TRIO-223ENST00000515710 DGKZQ13574 1117 aa22.7■■□□□ 1.23
TRIO-223ENST00000515710 GRAMD1CQ8IYS0 662 aa22.7■■□□□ 1.23
TRIO-223ENST00000515710 SAMD3Q8N6K7 520 aa22.7■■□□□ 1.23
TRIO-223ENST00000515710 RASSF8Q8NHQ8 419 aa22.7■■□□□ 1.23
TRIO-223ENST00000515710 RBM46Q8TBY0 533 aaKnown RBP22.7■■□□□ 1.23
TRIO-223ENST00000515710 TMOD4Q9NZQ9 345 aa22.7■■□□□ 1.23
TRIO-223ENST00000515710 MAN1B1Q9UKM7 699 aa22.7■■□□□ 1.23
TRIO-223ENST00000515710 CTDP1Q9Y5B0 961 aaPredicted RBP22.7■■□□□ 1.23
TRIO-223ENST00000515710 POLR2AP24928 1970 aaKnown RBP22.7■■□□□ 1.22
TRIO-223ENST00000515710 PP2D1A8MPX8 630 aa22.7■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms