RNA–Protein interactions for RNA: ENST00000515609.1

TPM3-222, Transcript of tropomyosin 3, humanhuman

TSL 3

Gene TPM3, Length 587 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-222ENST00000515609 SCAF8Q9UPN6 1271 aaKnown RBP10.75□□□□□ -0.69
TPM3-222ENST00000515609 CYP3A7-CYP3A51PA0A087WV96 503 aa10.74□□□□□ -0.69
TPM3-222ENST00000515609 A0A1B0GVL5 298 aa10.74□□□□□ -0.69
TPM3-222ENST00000515609 VWA3AA6NCI4 1184 aa10.74□□□□□ -0.69
TPM3-222ENST00000515609 B4DLN1 442 aa10.74□□□□□ -0.69
TPM3-222ENST00000515609 VWA5AO00534 786 aa10.74□□□□□ -0.69
TPM3-222ENST00000515609 SMC2O95347 1197 aa10.74□□□□□ -0.69
TPM3-222ENST00000515609 MYL1P05976 194 aa10.74□□□□□ -0.69
TPM3-222ENST00000515609 CYP3A7P24462 503 aa10.74□□□□□ -0.69
TPM3-222ENST00000515609 ZNF76P36508 570 aa10.74□□□□□ -0.69
TPM3-222ENST00000515609 SREBF1P36956 1147 aa10.74□□□□□ -0.69
TPM3-222ENST00000515609 NDUFA8P51970 172 aa10.74□□□□□ -0.69
TPM3-222ENST00000515609 HMGCS2P54868 508 aa10.74□□□□□ -0.69
TPM3-222ENST00000515609 XRRA1Q6P2D8 792 aa10.74□□□□□ -0.69
TPM3-222ENST00000515609 CCDC174Q6PII3 467 aa10.74□□□□□ -0.69
TPM3-222ENST00000515609 RBM43Q6ZSC3 357 aaKnown RBP10.74□□□□□ -0.69
TPM3-222ENST00000515609 KCTD17Q8N5Z5 321 aa10.74□□□□□ -0.69
TPM3-222ENST00000515609 CNNM3Q8NE01 707 aa10.74□□□□□ -0.69
TPM3-222ENST00000515609 RASSF8Q8NHQ8 419 aa10.74□□□□□ -0.69
TPM3-222ENST00000515609 SLC10A4Q96EP9 437 aa10.74□□□□□ -0.69
TPM3-222ENST00000515609 FAM20AQ96MK3 541 aa10.74□□□□□ -0.69
TPM3-222ENST00000515609 LRRC27Q9C0I9 530 aa10.74□□□□□ -0.69
TPM3-222ENST00000515609 FBXO40Q9UH90 709 aa10.74□□□□□ -0.69
TPM3-222ENST00000515609 DDX25Q9UHL0 483 aaKnown RBP10.74□□□□□ -0.69
TPM3-222ENST00000515609 PNMA3Q9UL41 463 aa10.74□□□□□ -0.69
TPM3-222ENST00000515609 HPSEQ9Y251 543 aa10.74□□□□□ -0.69
TPM3-222ENST00000515609 SNCAIPQ9Y6H5 919 aa10.74□□□□□ -0.69
TPM3-222ENST00000515609 BAZ2BQ9UIF8 2168 aaKnown RBP10.74□□□□□ -0.69
TPM3-222ENST00000515609 MEIS2O14770 477 aa10.73□□□□□ -0.69
TPM3-222ENST00000515609 CFBP00751 764 aa10.73□□□□□ -0.69
TPM3-222ENST00000515609 CYP3A4P08684 503 aa10.73□□□□□ -0.69
TPM3-222ENST00000515609 OSBPP22059 807 aa10.73□□□□□ -0.69
TPM3-222ENST00000515609 HOXA7P31268 230 aaPredicted RBP10.73□□□□□ -0.69
TPM3-222ENST00000515609 DSG3P32926 999 aa10.73□□□□□ -0.69
TPM3-222ENST00000515609 IRX3P78415 501 aaPredicted RBP10.73□□□□□ -0.69
TPM3-222ENST00000515609 AMPD3Q01432 767 aa10.73□□□□□ -0.69
TPM3-222ENST00000515609 GHRHRQ02643 423 aa10.73□□□□□ -0.69
TPM3-222ENST00000515609 SNAPC2Q13487 334 aa10.73□□□□□ -0.69
TPM3-222ENST00000515609 SNW1Q13573 536 aaKnown RBP10.73□□□□□ -0.69
TPM3-222ENST00000515609 PRKG1Q13976 671 aa10.73□□□□□ -0.69
TPM3-222ENST00000515609 UVSSAQ2YD98 709 aa10.73□□□□□ -0.69
TPM3-222ENST00000515609 SHC4Q6S5L8 630 aa10.73□□□□□ -0.69
TPM3-222ENST00000515609 SAMD1Q6SPF0 538 aaPredicted RBP10.73□□□□□ -0.69
TPM3-222ENST00000515609 CATSPERGQ6ZRH7 1159 aa10.73□□□□□ -0.69
TPM3-222ENST00000515609 ERMNQ8TAM6 284 aa10.73□□□□□ -0.69
TPM3-222ENST00000515609 RASGRP4Q8TDF6 673 aa10.73□□□□□ -0.69
TPM3-222ENST00000515609 CCDC47Q96A33 483 aaKnown RBP10.73□□□□□ -0.69
TPM3-222ENST00000515609 CALML4Q96GE6 196 aa10.73□□□□□ -0.69
TPM3-222ENST00000515609 MPHOSPH6Q99547 160 aaKnown RBP10.73□□□□□ -0.69
TPM3-222ENST00000515609 TEX13BQ9BXU2 312 aa10.73□□□□□ -0.69
TPM3-222ENST00000515609 GLIS2Q9BZE0 524 aaPredicted RBP10.73□□□□□ -0.69
TPM3-222ENST00000515609 CSRNP2Q9H175 543 aa10.73□□□□□ -0.69
TPM3-222ENST00000515609 ANO10Q9NW15 660 aa10.73□□□□□ -0.69
TPM3-222ENST00000515609 DACH1Q9UI36 760 aa10.73□□□□□ -0.69
TPM3-222ENST00000515609 SSC5DA1L4H1 1573 aa10.73□□□□□ -0.69
TPM3-222ENST00000515609 A0A0G2JLL6 359 aaPredicted RBP10.72□□□□□ -0.69
TPM3-222ENST00000515609 FSD2A1L4K1 749 aa10.72□□□□□ -0.69
TPM3-222ENST00000515609 FAM205CA6NFA0 338 aa10.72□□□□□ -0.69
TPM3-222ENST00000515609 CIITAP33076 1130 aa10.72□□□□□ -0.69
TPM3-222ENST00000515609 FXR2P51116 673 aaKnown RBP eCLIP10.72□□□□□ -0.69
TPM3-222ENST00000515609 ARHGAP4P98171 946 aa10.72□□□□□ -0.69
TPM3-222ENST00000515609 SETQ01105 290 aaPredicted RBP10.72□□□□□ -0.69
TPM3-222ENST00000515609 CAMK4Q16566 473 aa10.72□□□□□ -0.69
TPM3-222ENST00000515609 STX1AQ16623 288 aa10.72□□□□□ -0.69
TPM3-222ENST00000515609 EARS2Q5JPH6 523 aaKnown RBP10.72□□□□□ -0.69
TPM3-222ENST00000515609 KIAA1755Q5JYT7 1200 aa10.72□□□□□ -0.69
TPM3-222ENST00000515609 LDLRAD1Q5T700 205 aa10.72□□□□□ -0.69
TPM3-222ENST00000515609 USP17L6PQ6QN14 398 aa10.72□□□□□ -0.69
TPM3-222ENST00000515609 KRBA2Q6ZNG9 492 aa10.72□□□□□ -0.69
TPM3-222ENST00000515609 PRRT2Q7Z6L0 340 aaPredicted RBP10.72□□□□□ -0.69
TPM3-222ENST00000515609 CHST13Q8NET6 341 aa10.72□□□□□ -0.69
TPM3-222ENST00000515609 OTUD5Q96G74 571 aa10.72□□□□□ -0.69
TPM3-222ENST00000515609 CDK5RAP3Q96JB5 506 aa10.72□□□□□ -0.69
TPM3-222ENST00000515609 CCSER1Q9C0I3 900 aa10.72□□□□□ -0.69
TPM3-222ENST00000515609 GRPEL1Q9HAV7 217 aa10.72□□□□□ -0.69
TPM3-222ENST00000515609 FBXO28Q9NVF7 368 aa10.72□□□□□ -0.69
TPM3-222ENST00000515609 PCDHA12Q9UN75 941 aa10.72□□□□□ -0.69
TPM3-222ENST00000515609 ADAMTS5Q9UNA0 930 aa10.72□□□□□ -0.69
TPM3-222ENST00000515609 KCNH4Q9UQ05 1017 aa10.72□□□□□ -0.69
TPM3-222ENST00000515609 POLR2DO15514 142 aaKnown RBP10.71□□□□□ -0.69
TPM3-222ENST00000515609 STAM2O75886 525 aa10.71□□□□□ -0.69
TPM3-222ENST00000515609 SLFN14P0C7P3 912 aa10.71□□□□□ -0.69
TPM3-222ENST00000515609 CETPP11597 493 aa10.71□□□□□ -0.69
TPM3-222ENST00000515609 ALAS1P13196 640 aa10.71□□□□□ -0.69
TPM3-222ENST00000515609 HSD17B4P51659 736 aa10.71□□□□□ -0.69
TPM3-222ENST00000515609 GTF2A2P52657 109 aa10.71□□□□□ -0.69
TPM3-222ENST00000515609 TPM4P67936 248 aa10.71□□□□□ -0.69
TPM3-222ENST00000515609 UBE2SQ16763 222 aa10.71□□□□□ -0.69
TPM3-222ENST00000515609 Q4G0T1 1027 aa10.71□□□□□ -0.69
TPM3-222ENST00000515609 CT47A1Q5JQC4 288 aaPredicted RBP10.71□□□□□ -0.69
TPM3-222ENST00000515609 KRT79Q5XKE5 535 aa10.71□□□□□ -0.69
TPM3-222ENST00000515609 HAUS3Q68CZ6 603 aa10.71□□□□□ -0.69
TPM3-222ENST00000515609 LBX2Q6XYB7 198 aa10.71□□□□□ -0.69
TPM3-222ENST00000515609 GADL1Q6ZQY3 521 aa10.71□□□□□ -0.69
TPM3-222ENST00000515609 NIPA1Q7RTP0 329 aa10.71□□□□□ -0.69
TPM3-222ENST00000515609 CCDC84Q86UT8 332 aaPredicted RBP10.71□□□□□ -0.69
TPM3-222ENST00000515609 CPXCR1Q8N123 301 aa10.71□□□□□ -0.69
TPM3-222ENST00000515609 C4orf32Q8N8J7 132 aa10.71□□□□□ -0.69
TPM3-222ENST00000515609 TRIML1Q8N9V2 468 aa10.71□□□□□ -0.69
TPM3-222ENST00000515609 SYMPKQ92797 1274 aaKnown RBP10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms