RNA–Protein interactions for RNA: ENST00000515594.5

PHF3-212, Transcript of PHD finger protein 3, humanhuman

TSL 2

Gene PHF3, Length 3,074 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-212ENST00000515594 PACS2Q86VP3 889 aa14.4□□□□□ -0.1
PHF3-212ENST00000515594 MAPKAPK5Q8IW41 473 aa14.4□□□□□ -0.1
PHF3-212ENST00000515594 TGFBRAP1Q8WUH2 860 aa14.4□□□□□ -0.1
PHF3-212ENST00000515594 SMARCC1Q92922 1105 aaPredicted RBP14.4□□□□□ -0.1
PHF3-212ENST00000515594 UBA5Q9GZZ9 404 aa14.4□□□□□ -0.1
PHF3-212ENST00000515594 BIN2Q9UBW5 565 aaPredicted RBP14.4□□□□□ -0.1
PHF3-212ENST00000515594 ORC4O43929 436 aa14.4□□□□□ -0.1
PHF3-212ENST00000515594 EEF1GP26641 437 aaKnown RBP14.4□□□□□ -0.1
PHF3-212ENST00000515594 UBE4AQ14139 1066 aa14.4□□□□□ -0.1
PHF3-212ENST00000515594 MEA1Q16626 185 aa14.4□□□□□ -0.1
PHF3-212ENST00000515594 PARP10Q53GL7 1025 aa14.4□□□□□ -0.1
PHF3-212ENST00000515594 ARL6IP4Q66PJ3 421 aaKnown RBP14.4□□□□□ -0.1
PHF3-212ENST00000515594 DZIP1Q86YF9 867 aaKnown RBP14.4□□□□□ -0.1
PHF3-212ENST00000515594 POTEDQ86YR6 584 aa14.4□□□□□ -0.1
PHF3-212ENST00000515594 SECISBP2LQ93073 1101 aaKnown RBP14.4□□□□□ -0.1
PHF3-212ENST00000515594 CCDC42Q96M95 316 aa14.4□□□□□ -0.1
PHF3-212ENST00000515594 CRACR2AQ9BSW2 395 aa14.4□□□□□ -0.1
PHF3-212ENST00000515594 THAP9Q9H5L6 903 aa14.4□□□□□ -0.1
PHF3-212ENST00000515594 MYH1P12882 1939 aa14.39□□□□□ -0.11
PHF3-212ENST00000515594 STXBP3O00186 592 aa14.39□□□□□ -0.11
PHF3-212ENST00000515594 IPO7O95373 1038 aaKnown RBP14.39□□□□□ -0.11
PHF3-212ENST00000515594 EIF4A3P38919 411 aaKnown RBP14.39□□□□□ -0.11
PHF3-212ENST00000515594 TUBB2AQ13885 445 aa14.39□□□□□ -0.11
PHF3-212ENST00000515594 TBC1D9BQ66K14 1250 aa14.39□□□□□ -0.11
PHF3-212ENST00000515594 CREG2Q8IUH2 290 aa14.39□□□□□ -0.11
PHF3-212ENST00000515594 CLEC10AQ8IUN9 316 aa14.39□□□□□ -0.11
PHF3-212ENST00000515594 TSEN2Q8NCE0 465 aaKnown RBP14.39□□□□□ -0.11
PHF3-212ENST00000515594 PROCA1Q8NCQ7 364 aaPredicted RBP14.39□□□□□ -0.11
PHF3-212ENST00000515594 TUBB2BQ9BVA1 445 aa14.39□□□□□ -0.11
PHF3-212ENST00000515594 IFIH1Q9BYX4 1025 aaKnown RBP14.39□□□□□ -0.11
PHF3-212ENST00000515594 ZNHIT6Q9NWK9 470 aaKnown RBP14.39□□□□□ -0.11
PHF3-212ENST00000515594 TSPY3P0CV98 308 aa14.39□□□□□ -0.11
PHF3-212ENST00000515594 TSPY8P0CW00 308 aa14.39□□□□□ -0.11
PHF3-212ENST00000515594 HIBADHP31937 336 aaKnown RBP14.39□□□□□ -0.11
PHF3-212ENST00000515594 CYLC1P35663 651 aaPredicted RBP14.39□□□□□ -0.11
PHF3-212ENST00000515594 GFPT1Q06210 699 aaPredicted RBP14.39□□□□□ -0.11
PHF3-212ENST00000515594 KIF5AQ12840 1032 aa14.39□□□□□ -0.11
PHF3-212ENST00000515594 CCNI2Q6ZMN8 369 aaPredicted RBP14.39□□□□□ -0.11
PHF3-212ENST00000515594 NUDT12Q9BQG2 462 aa14.39□□□□□ -0.11
PHF3-212ENST00000515594 NLRC4Q9NPP4 1024 aa14.39□□□□□ -0.11
PHF3-212ENST00000515594 BSDC1Q9NW68 430 aaPredicted RBP14.39□□□□□ -0.11
PHF3-212ENST00000515594 PACSIN2Q9UNF0 486 aaPredicted RBP14.39□□□□□ -0.11
PHF3-212ENST00000515594 A0A1W2PQC6 194 aa14.38□□□□□ -0.11
PHF3-212ENST00000515594 POTEMA6NI47 508 aa14.38□□□□□ -0.11
PHF3-212ENST00000515594 CALML3P27482 149 aa14.38□□□□□ -0.11
PHF3-212ENST00000515594 KIF5BP33176 963 aa14.38□□□□□ -0.11
PHF3-212ENST00000515594 NAPAP54920 295 aa14.38□□□□□ -0.11
PHF3-212ENST00000515594 KRT83P78385 493 aa14.38□□□□□ -0.11
PHF3-212ENST00000515594 KCTD16Q68DU8 428 aa14.38□□□□□ -0.11
PHF3-212ENST00000515594 RRAGAQ7L523 313 aa14.38□□□□□ -0.11
PHF3-212ENST00000515594 SH2D3CQ8N5H7 860 aa14.38□□□□□ -0.11
PHF3-212ENST00000515594 MMTAG2Q9BU76 263 aaKnown RBP14.38□□□□□ -0.11
PHF3-212ENST00000515594 TBC1D7Q9P0N9 293 aa14.38□□□□□ -0.11
PHF3-212ENST00000515594 NUTM2BA6NNL0 878 aaPredicted RBP14.38□□□□□ -0.11
PHF3-212ENST00000515594 NUTM2EB1AL46 878 aaPredicted RBP14.38□□□□□ -0.11
PHF3-212ENST00000515594 CCT5P48643 541 aa14.38□□□□□ -0.11
PHF3-212ENST00000515594 ZBED6P86452 979 aa14.38□□□□□ -0.11
PHF3-212ENST00000515594 ARID5AQ03989 594 aa14.38□□□□□ -0.11
PHF3-212ENST00000515594 TRADDQ15628 312 aa14.38□□□□□ -0.11
PHF3-212ENST00000515594 GOLGA6L1Q8N7Z2 621 aa14.38□□□□□ -0.11
PHF3-212ENST00000515594 MARCH10Q8NA82 808 aaPredicted RBP14.38□□□□□ -0.11
PHF3-212ENST00000515594 TMEM47Q9BQJ4 181 aa14.38□□□□□ -0.11
PHF3-212ENST00000515594 DEF6Q9H4E7 631 aa14.38□□□□□ -0.11
PHF3-212ENST00000515594 MED4Q9NPJ6 270 aa14.38□□□□□ -0.11
PHF3-212ENST00000515594 DLEC1Q9Y238 1755 aa14.38□□□□□ -0.11
PHF3-212ENST00000515594 LRRC53A6NM62 1247 aa14.38□□□□□ -0.11
PHF3-212ENST00000515594 CCNE1P24864 410 aa14.38□□□□□ -0.11
PHF3-212ENST00000515594 EIF6P56537 245 aaKnown RBP14.38□□□□□ -0.11
PHF3-212ENST00000515594 FBXO33Q7Z6M2 555 aa14.38□□□□□ -0.11
PHF3-212ENST00000515594 ARL8AQ96BM9 186 aa14.38□□□□□ -0.11
PHF3-212ENST00000515594 SAMM50Q9Y512 469 aa14.38□□□□□ -0.11
PHF3-212ENST00000515594 GOLGA6BA6NDN3 693 aa14.37□□□□□ -0.11
PHF3-212ENST00000515594 KLRF2D3W0D1 207 aa14.37□□□□□ -0.11
PHF3-212ENST00000515594 KIF11P52732 1056 aa14.37□□□□□ -0.11
PHF3-212ENST00000515594 NAP1L1P55209 391 aaKnown RBP14.37□□□□□ -0.11
PHF3-212ENST00000515594 CACNB1Q02641 598 aaPredicted RBP14.37□□□□□ -0.11
PHF3-212ENST00000515594 RASSF7Q02833 373 aa14.37□□□□□ -0.11
PHF3-212ENST00000515594 PCDHA13Q9Y5I0 950 aa14.37□□□□□ -0.11
PHF3-212ENST00000515594 VAV2P52735 878 aa14.37□□□□□ -0.11
PHF3-212ENST00000515594 KCNB1Q14721 858 aa14.37□□□□□ -0.11
PHF3-212ENST00000515594 KCNK18Q7Z418 384 aa14.37□□□□□ -0.11
PHF3-212ENST00000515594 MTMR8Q96EF0 704 aa14.37□□□□□ -0.11
PHF3-212ENST00000515594 SNX12Q9UMY4 172 aa14.37□□□□□ -0.11
PHF3-212ENST00000515594 FRMPD2Q68DX3 1309 aaPredicted RBP14.36□□□□□ -0.11
PHF3-212ENST00000515594 GOLGA6CA6NDK9 693 aa14.36□□□□□ -0.11
PHF3-212ENST00000515594 MYMKA6NI61 221 aa14.36□□□□□ -0.11
PHF3-212ENST00000515594 AKR1B10O60218 316 aa14.36□□□□□ -0.11
PHF3-212ENST00000515594 OR52Z1P0C646 297 aa14.36□□□□□ -0.11
PHF3-212ENST00000515594 GOLGA6DP0CG33 693 aa14.36□□□□□ -0.11
PHF3-212ENST00000515594 SLURP2P0DP57 97 aa14.36□□□□□ -0.11
PHF3-212ENST00000515594 AARSP49588 968 aaKnown RBP eCLIP14.36□□□□□ -0.114e-6■■■■□ 24
PHF3-212ENST00000515594 SPA17Q15506 151 aa14.36□□□□□ -0.11
PHF3-212ENST00000515594 SPATA4Q8NEY3 305 aa14.36□□□□□ -0.11
PHF3-212ENST00000515594 TBCKQ8TEA7 893 aa14.36□□□□□ -0.11
PHF3-212ENST00000515594 FGFBP2Q9BYJ0 223 aa14.36□□□□□ -0.11
PHF3-212ENST00000515594 TANGO6Q9C0B7 1094 aa14.36□□□□□ -0.11
PHF3-212ENST00000515594 GOLPH3Q9H4A6 298 aa14.36□□□□□ -0.11
PHF3-212ENST00000515594 TCP11L1Q9NUJ3 509 aa14.36□□□□□ -0.11
PHF3-212ENST00000515594 BARHL2Q9NY43 387 aa14.36□□□□□ -0.11
PHF3-212ENST00000515594 GOLGA6AQ9NYA3 693 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms