RNA–Protein interactions for RNA: ENST00000515572.5

SNF8-215, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 2

Gene SNF8, Length 687 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-215ENST00000515572 PWP2Q15269 919 aaKnown RBP13.73□□□□□ -0.21
SNF8-215ENST00000515572 MFSD14CQ5VZR4 134 aa13.73□□□□□ -0.21
SNF8-215ENST00000515572 PPP1R18Q6NYC8 613 aa13.73□□□□□ -0.21
SNF8-215ENST00000515572 HEATR3Q7Z4Q2 680 aa13.73□□□□□ -0.21
SNF8-215ENST00000515572 TNS4Q8IZW8 715 aa13.73□□□□□ -0.21
SNF8-215ENST00000515572 PHKBQ93100 1093 aa13.73□□□□□ -0.21
SNF8-215ENST00000515572 ARMC5Q96C12 935 aa13.73□□□□□ -0.21
SNF8-215ENST00000515572 SLC26A6Q9BXS9 759 aa13.73□□□□□ -0.21
SNF8-215ENST00000515572 ADD3Q9UEY8 706 aaKnown RBP13.73□□□□□ -0.21
SNF8-215ENST00000515572 STK36Q9NRP7 1315 aa13.72□□□□□ -0.21
SNF8-215ENST00000515572 OPLAHO14841 1288 aa13.72□□□□□ -0.21
SNF8-215ENST00000515572 LARGE1O95461 756 aa13.72□□□□□ -0.21
SNF8-215ENST00000515572 CFBP00751 764 aa13.72□□□□□ -0.21
SNF8-215ENST00000515572 CALML3P27482 149 aa13.72□□□□□ -0.21
SNF8-215ENST00000515572 HSD17B4P51659 736 aa13.72□□□□□ -0.21
SNF8-215ENST00000515572 UBXN2AP68543 259 aa13.72□□□□□ -0.21
SNF8-215ENST00000515572 CCL14Q16627 93 aa13.72□□□□□ -0.21
SNF8-215ENST00000515572 SLC30A10Q6XR72 485 aa13.72□□□□□ -0.21
SNF8-215ENST00000515572 CCDC12Q8WUD4 166 aaPredicted RBP13.72□□□□□ -0.21
SNF8-215ENST00000515572 MPHOSPH6Q99547 160 aaKnown RBP13.72□□□□□ -0.21
SNF8-215ENST00000515572 BARHL2Q9NY43 387 aa13.72□□□□□ -0.21
SNF8-215ENST00000515572 BIN2Q9UBW5 565 aaPredicted RBP13.72□□□□□ -0.21
SNF8-215ENST00000515572 MCM3APO60318 1980 aa13.72□□□□□ -0.21
SNF8-215ENST00000515572 SYNGAP1Q96PV0 1343 aa13.71□□□□□ -0.21
SNF8-215ENST00000515572 B4DLN1 442 aa13.71□□□□□ -0.21
SNF8-215ENST00000515572 GCOM1H8Y6P7 765 aaPredicted RBP13.71□□□□□ -0.21
SNF8-215ENST00000515572 STXBP3O00186 592 aa13.71□□□□□ -0.21
SNF8-215ENST00000515572 PIK3CDO00329 1044 aa13.71□□□□□ -0.21
SNF8-215ENST00000515572 DEXIO95424 95 aa13.71□□□□□ -0.21
SNF8-215ENST00000515572 IGHA2P01877 340 aa13.71□□□□□ -0.21
SNF8-215ENST00000515572 INHAP05111 366 aa13.71□□□□□ -0.21
SNF8-215ENST00000515572 POLR2MP0CAP2 368 aa13.71□□□□□ -0.21
SNF8-215ENST00000515572 MRPL12P52815 198 aaKnown RBP13.71□□□□□ -0.21
SNF8-215ENST00000515572 NAPAP54920 295 aa13.71□□□□□ -0.21
SNF8-215ENST00000515572 CNTN2Q02246 1040 aa13.71□□□□□ -0.21
SNF8-215ENST00000515572 WWC2Q6AWC2 1192 aa13.71□□□□□ -0.21
SNF8-215ENST00000515572 MAMDC4Q6UXC1 1216 aa13.71□□□□□ -0.21
SNF8-215ENST00000515572 FAM177A1Q8N128 213 aaPredicted RBP13.71□□□□□ -0.21
SNF8-215ENST00000515572 NECAB1Q8N987 351 aa13.71□□□□□ -0.21
SNF8-215ENST00000515572 DNERQ8NFT8 737 aa13.71□□□□□ -0.21
SNF8-215ENST00000515572 SH3TC2Q8TF17 1288 aa13.71□□□□□ -0.21
SNF8-215ENST00000515572 GPKOWQ92917 476 aaPredicted RBP eCLIP13.71□□□□□ -0.21
SNF8-215ENST00000515572 CUL5Q93034 780 aa13.71□□□□□ -0.21
SNF8-215ENST00000515572 TINF2Q9BSI4 451 aa13.71□□□□□ -0.21
SNF8-215ENST00000515572 GLT8D2Q9H1C3 349 aa13.71□□□□□ -0.21
SNF8-215ENST00000515572 PSTPIP2Q9H939 334 aa13.71□□□□□ -0.21
SNF8-215ENST00000515572 FLRT1Q9NZU1 646 aa13.71□□□□□ -0.21
SNF8-215ENST00000515572 NRBP1Q9UHY1 535 aa13.71□□□□□ -0.21
SNF8-215ENST00000515572 SOWAHBA6NEL2 793 aa13.7□□□□□ -0.22
SNF8-215ENST00000515572 ASB14A6NK59 587 aa13.7□□□□□ -0.22
SNF8-215ENST00000515572 PKN1Q16512 942 aa13.7□□□□□ -0.22
SNF8-215ENST00000515572 MAP3K21Q5TCX8 1036 aa13.7□□□□□ -0.22
SNF8-215ENST00000515572 SYTL5Q8TDW5 730 aaPredicted RBP13.7□□□□□ -0.22
SNF8-215ENST00000515572 WASF1Q92558 559 aa13.7□□□□□ -0.22
SNF8-215ENST00000515572 TBC1D5Q92609 795 aa13.7□□□□□ -0.22
SNF8-215ENST00000515572 ZNF333Q96JL9 665 aa13.7□□□□□ -0.22
SNF8-215ENST00000515572 FGD4Q96M96 766 aa13.7□□□□□ -0.22
SNF8-215ENST00000515572 LLPHQ9BRT6 129 aaKnown RBP13.7□□□□□ -0.22
SNF8-215ENST00000515572 SH3GLB2Q9NR46 395 aa13.7□□□□□ -0.22
SNF8-215ENST00000515572 LRRC37A2A6NM11 1700 aa13.7□□□□□ -0.22
SNF8-215ENST00000515572 ESYT2A0FGR8 921 aa13.69□□□□□ -0.22
SNF8-215ENST00000515572 CTDNEP1O95476 244 aa13.69□□□□□ -0.22
SNF8-215ENST00000515572 CYP2C19P33261 490 aa13.69□□□□□ -0.22
SNF8-215ENST00000515572 ALDH5A1P51649 535 aaPredicted RBP13.69□□□□□ -0.22
SNF8-215ENST00000515572 ADCY7P51828 1080 aa13.69□□□□□ -0.22
SNF8-215ENST00000515572 CCDC148Q8NFR7 591 aa13.69□□□□□ -0.22
SNF8-215ENST00000515572 SMARCC2Q8TAQ2 1214 aa13.69□□□□□ -0.22
SNF8-215ENST00000515572 NSUN6Q8TEA1 469 aaKnown RBP13.69□□□□□ -0.22
SNF8-215ENST00000515572 ABHD8Q96I13 439 aa13.69□□□□□ -0.22
SNF8-215ENST00000515572 CNPY2Q9Y2B0 182 aa13.69□□□□□ -0.22
SNF8-215ENST00000515572 ASTN1O14525 1302 aa13.68□□□□□ -0.22
SNF8-215ENST00000515572 RPTORQ8N122 1335 aa13.68□□□□□ -0.22
SNF8-215ENST00000515572 MEIS2O14770 477 aa13.68□□□□□ -0.22
SNF8-215ENST00000515572 PRKAR2AP13861 404 aaKnown RBP13.68□□□□□ -0.22
SNF8-215ENST00000515572 XBP1P17861 261 aa13.68□□□□□ -0.22
SNF8-215ENST00000515572 HOXA13P31271 388 aaPredicted RBP13.68□□□□□ -0.22
SNF8-215ENST00000515572 CACNB2Q08289 660 aaPredicted RBP13.68□□□□□ -0.22
SNF8-215ENST00000515572 MCTP2Q6DN12 878 aa13.68□□□□□ -0.22
SNF8-215ENST00000515572 TYW1BQ6NUM6 668 aa13.68□□□□□ -0.22
SNF8-215ENST00000515572 ARMCX2Q7L311 632 aa13.68□□□□□ -0.22
SNF8-215ENST00000515572 CCDC83Q8IWF9 413 aa13.68□□□□□ -0.22
SNF8-215ENST00000515572 NSUN7Q8NE18 718 aaKnown RBP13.68□□□□□ -0.22
SNF8-215ENST00000515572 MORC4Q8TE76 937 aa13.68□□□□□ -0.22
SNF8-215ENST00000515572 TMX3Q96JJ7 454 aa13.68□□□□□ -0.22
SNF8-215ENST00000515572 PURBQ96QR8 312 aaKnown RBP13.68□□□□□ -0.22
SNF8-215ENST00000515572 IWS1Q96ST2 819 aa13.68□□□□□ -0.22
SNF8-215ENST00000515572 RMDN3Q96TC7 470 aa13.68□□□□□ -0.22
SNF8-215ENST00000515572 ZMYND12Q9H0C1 365 aa13.68□□□□□ -0.22
SNF8-215ENST00000515572 ABHD16BQ9H3Z7 469 aa13.68□□□□□ -0.22
SNF8-215ENST00000515572 HMX1Q9NP08 348 aaPredicted RBP13.68□□□□□ -0.22
SNF8-215ENST00000515572 RIC8AQ9NPQ8 531 aa13.68□□□□□ -0.22
SNF8-215ENST00000515572 COL20A1Q9P218 1284 aa13.68□□□□□ -0.22
SNF8-215ENST00000515572 ORC3Q9UBD5 711 aaPredicted RBP13.68□□□□□ -0.22
SNF8-215ENST00000515572 FRMPD3Q5JV73 1810 aa13.67□□□□□ -0.22
SNF8-215ENST00000515572 KIAA1217Q5T5P2 1943 aa13.67□□□□□ -0.22
SNF8-215ENST00000515572 SMCO2A6NFE2 343 aa13.67□□□□□ -0.22
SNF8-215ENST00000515572 PPFIA3O75145 1194 aa13.67□□□□□ -0.22
SNF8-215ENST00000515572 CD2BP2O95400 341 aaKnown RBP13.67□□□□□ -0.22
SNF8-215ENST00000515572 CYBAP13498 195 aa13.67□□□□□ -0.22
SNF8-215ENST00000515572 EDNRBP24530 442 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms