RNA–Protein interactions for RNA: ENST00000515233.5

DDR1-278, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 580 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-278ENST00000515233 MSRAQ9UJ68 235 aa17.72■□□□□ 0.43
DDR1-278ENST00000515233 MTMR7Q9Y216 660 aa17.72■□□□□ 0.43
DDR1-278ENST00000515233 ZMYM6O95789 1325 aa17.72■□□□□ 0.43
DDR1-278ENST00000515233 NFIBO00712 420 aa17.71■□□□□ 0.43
DDR1-278ENST00000515233 HSPD1P10809 573 aaKnown RBP17.71■□□□□ 0.43
DDR1-278ENST00000515233 CCL23P55773 120 aa17.71■□□□□ 0.43
DDR1-278ENST00000515233 PSMC6P62333 389 aa17.71■□□□□ 0.43
DDR1-278ENST00000515233 TJAP1Q5JTD0 557 aa17.71■□□□□ 0.43
DDR1-278ENST00000515233 RPUSD2Q8IZ73 545 aaKnown RBP17.71■□□□□ 0.43
DDR1-278ENST00000515233 WDR11Q9BZH6 1224 aa17.71■□□□□ 0.43
DDR1-278ENST00000515233 TOMM22Q9NS69 142 aa17.71■□□□□ 0.43
DDR1-278ENST00000515233 POLR3EQ9NVU0 708 aa17.71■□□□□ 0.43
DDR1-278ENST00000515233 SUPT20HL2P0C7V6 817 aa17.7■□□□□ 0.42
DDR1-278ENST00000515233 PDHBP11177 359 aa17.7■□□□□ 0.42
DDR1-278ENST00000515233 PCP11498 1178 aaKnown RBP17.7■□□□□ 0.42
DDR1-278ENST00000515233 OTOP2Q7RTS6 562 aa17.7■□□□□ 0.42
DDR1-278ENST00000515233 CLEC4DQ8WXI8 215 aa17.7■□□□□ 0.42
DDR1-278ENST00000515233 FAM227BQ96M60 508 aa17.7■□□□□ 0.42
DDR1-278ENST00000515233 WNT8AQ9H1J5 351 aa17.7■□□□□ 0.42
DDR1-278ENST00000515233 ALDH8A1Q9H2A2 487 aaPredicted RBP17.7■□□□□ 0.42
DDR1-278ENST00000515233 PRDM12Q9H4Q4 367 aa17.7■□□□□ 0.42
DDR1-278ENST00000515233 GPCPD1Q9NPB8 672 aa17.7■□□□□ 0.42
DDR1-278ENST00000515233 CHD9Q3L8U1 2897 aa17.69■□□□□ 0.42
DDR1-278ENST00000515233 A0A0D9SFI3 127 aa17.69■□□□□ 0.42
DDR1-278ENST00000515233 PTPDC1A2A3K4 754 aa17.69■□□□□ 0.42
DDR1-278ENST00000515233 SNHG28P0DPA3 235 aa17.69■□□□□ 0.42
DDR1-278ENST00000515233 CPT1AP50416 773 aa17.69■□□□□ 0.42
DDR1-278ENST00000515233 PURAQ00577 322 aaKnown RBP17.69■□□□□ 0.42
DDR1-278ENST00000515233 HDAC1Q13547 482 aaPredicted RBP17.69■□□□□ 0.42
DDR1-278ENST00000515233 RRP12Q5JTH9 1297 aaKnown RBP17.69■□□□□ 0.42
DDR1-278ENST00000515233 VWCEQ96DN2 955 aa17.69■□□□□ 0.42
DDR1-278ENST00000515233 SLC28A3Q9HAS3 691 aa17.69■□□□□ 0.42
DDR1-278ENST00000515233 FRMPD2Q68DX3 1309 aaPredicted RBP17.69■□□□□ 0.42
DDR1-278ENST00000515233 NKRFO15226 690 aaKnown RBP eCLIP17.68■□□□□ 0.42
DDR1-278ENST00000515233 EDNRBP24530 442 aa17.68■□□□□ 0.42
DDR1-278ENST00000515233 RRP1P56182 461 aaKnown RBP17.68■□□□□ 0.42
DDR1-278ENST00000515233 ZNF543Q08ER8 600 aa17.68■□□□□ 0.42
DDR1-278ENST00000515233 RNF207Q6ZRF8 634 aa17.68■□□□□ 0.42
DDR1-278ENST00000515233 DNERQ8NFT8 737 aa17.68■□□□□ 0.42
DDR1-278ENST00000515233 ATXN2LQ8WWM7 1075 aaKnown RBP17.68■□□□□ 0.42
DDR1-278ENST00000515233 GBF1Q92538 1859 aa17.68■□□□□ 0.42
DDR1-278ENST00000515233 MPHOSPH6Q99547 160 aaKnown RBP17.68■□□□□ 0.42
DDR1-278ENST00000515233 PRDM6Q9NQX0 595 aa17.68■□□□□ 0.42
DDR1-278ENST00000515233 WDR19Q8NEZ3 1342 aa17.68■□□□□ 0.42
DDR1-278ENST00000515233 PFKMP08237 780 aa17.67■□□□□ 0.42
DDR1-278ENST00000515233 ADGRE1Q14246 886 aa17.67■□□□□ 0.42
DDR1-278ENST00000515233 SLC30A10Q6XR72 485 aa17.67■□□□□ 0.42
DDR1-278ENST00000515233 MFSD6Q6ZSS7 791 aa17.67■□□□□ 0.42
DDR1-278ENST00000515233 ZNF589Q86UQ0 364 aaPredicted RBP17.67■□□□□ 0.42
DDR1-278ENST00000515233 SCLYQ96I15 445 aa17.67■□□□□ 0.42
DDR1-278ENST00000515233 MTG1Q9BT17 334 aaPredicted RBP17.67■□□□□ 0.42
DDR1-278ENST00000515233 MAF1Q9H063 256 aa17.67■□□□□ 0.42
DDR1-278ENST00000515233 NKX2-4Q9H2Z4 354 aa17.67■□□□□ 0.42
DDR1-278ENST00000515233 GPHNQ9NQX3 736 aaPredicted RBP17.67■□□□□ 0.42
DDR1-278ENST00000515233 YBX2Q9Y2T7 364 aaKnown RBP17.67■□□□□ 0.42
DDR1-278ENST00000515233 SLC4A7Q9Y6M7 1214 aa17.67■□□□□ 0.42
DDR1-278ENST00000515233 MYO9BQ13459 2157 aa17.67■□□□□ 0.42
DDR1-278ENST00000515233 TNKSO95271 1327 aa17.67■□□□□ 0.42
DDR1-278ENST00000515233 A6NJR5 290 aa17.66■□□□□ 0.42
DDR1-278ENST00000515233 B4DLN1 442 aa17.66■□□□□ 0.42
DDR1-278ENST00000515233 KPNA6O60684 536 aa17.66■□□□□ 0.42
DDR1-278ENST00000515233 CALML3P27482 149 aa17.66■□□□□ 0.42
DDR1-278ENST00000515233 NT5C2P49902 561 aa17.66■□□□□ 0.42
DDR1-278ENST00000515233 MRPL12P52815 198 aaKnown RBP17.66■□□□□ 0.42
DDR1-278ENST00000515233 RPS6P62753 249 aaKnown RBP17.66■□□□□ 0.42
DDR1-278ENST00000515233 NMIQ13287 307 aaPredicted RBP17.66■□□□□ 0.42
DDR1-278ENST00000515233 BRDTQ58F21 947 aaPredicted RBP17.66■□□□□ 0.42
DDR1-278ENST00000515233 GPATCH4Q5T3I0 446 aaKnown RBP17.66■□□□□ 0.42
DDR1-278ENST00000515233 DGKHQ86XP1 1220 aa17.66■□□□□ 0.42
DDR1-278ENST00000515233 RGS22Q8NE09 1264 aa17.66■□□□□ 0.42
DDR1-278ENST00000515233 OR6J1Q8NGC5 347 aa17.66■□□□□ 0.42
DDR1-278ENST00000515233 TRMT13Q9NUP7 481 aaKnown RBP17.66■□□□□ 0.42
DDR1-278ENST00000515233 PCDHA11Q9Y5I1 949 aa17.66■□□□□ 0.42
DDR1-278ENST00000515233 MYL3P08590 195 aa17.65■□□□□ 0.42
DDR1-278ENST00000515233 CYP2C9P11712 490 aa17.65■□□□□ 0.42
DDR1-278ENST00000515233 HAND2P61296 217 aa17.65■□□□□ 0.42
DDR1-278ENST00000515233 PTPN11Q06124 597 aaPredicted RBP17.65■□□□□ 0.42
DDR1-278ENST00000515233 PDE4DQ08499 809 aa17.65■□□□□ 0.42
DDR1-278ENST00000515233 PPP2R5BQ15173 497 aa17.65■□□□□ 0.42
DDR1-278ENST00000515233 NFRKBQ6P4R8 1299 aa17.65■□□□□ 0.42
DDR1-278ENST00000515233 SCFD2Q8WU76 684 aa17.65■□□□□ 0.42
DDR1-278ENST00000515233 PPM1EQ8WY54 764 aa17.65■□□□□ 0.42
DDR1-278ENST00000515233 CRBNQ96SW2 442 aa17.65■□□□□ 0.42
DDR1-278ENST00000515233 RNF41Q9H4P4 317 aaPredicted RBP17.65■□□□□ 0.42
DDR1-278ENST00000515233 SCN10AQ9Y5Y9 1956 aa17.65■□□□□ 0.42
DDR1-278ENST00000515233 CCDC171Q6TFL3 1326 aa17.65■□□□□ 0.42
DDR1-278ENST00000515233 RAD50Q92878 1312 aa17.65■□□□□ 0.42
DDR1-278ENST00000515233 MFAP1P55081 439 aaKnown RBP17.64■□□□□ 0.41
DDR1-278ENST00000515233 NBPF20Q3BBV1 942 aa17.64■□□□□ 0.41
DDR1-278ENST00000515233 ESR2Q92731 530 aa17.64■□□□□ 0.41
DDR1-278ENST00000515233 ASB2Q96Q27 587 aa17.64■□□□□ 0.41
DDR1-278ENST00000515233 THEGQ9P2T0 379 aa17.64■□□□□ 0.41
DDR1-278ENST00000515233 TNFRSF10AO00220 468 aa17.63■□□□□ 0.41
DDR1-278ENST00000515233 PITPNM1O00562 1244 aa17.63■□□□□ 0.41
DDR1-278ENST00000515233 TXNP10599 105 aaKnown RBP17.63■□□□□ 0.41
DDR1-278ENST00000515233 ATP2A2P16615 1042 aaKnown RBP17.63■□□□□ 0.41
DDR1-278ENST00000515233 IGFBP4P22692 258 aa17.63■□□□□ 0.41
DDR1-278ENST00000515233 RFC2P35250 354 aa17.63■□□□□ 0.41
DDR1-278ENST00000515233 RABGGTBP53611 331 aa17.63■□□□□ 0.41
DDR1-278ENST00000515233 CHD7Q9P2D1 2997 aa17.63■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms