RNA–Protein interactions for RNA: ENST00000515005.1

SMAD5-210, Transcript of SMAD family member 5, humanhuman

TSL 1 (best)

Gene SMAD5, Length 368 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD5-210ENST00000515005 MYL3P08590 195 aa14.3□□□□□ -0.12
SMAD5-210ENST00000515005 EPC2Q52LR7 807 aa14.3□□□□□ -0.12
SMAD5-210ENST00000515005 IQSEC1Q6DN90 963 aa14.3□□□□□ -0.12
SMAD5-210ENST00000515005 FBXO16Q8IX29 292 aaPredicted RBP14.3□□□□□ -0.12
SMAD5-210ENST00000515005 NSUN3Q9H649 340 aaKnown RBP14.3□□□□□ -0.12
SMAD5-210ENST00000515005 POLR3EQ9NVU0 708 aa14.3□□□□□ -0.12
SMAD5-210ENST00000515005 SWAP70Q9UH65 585 aa14.3□□□□□ -0.12
SMAD5-210ENST00000515005 MTX1Q13505 466 aa14.29□□□□□ -0.12
SMAD5-210ENST00000515005 CTC1Q2NKJ3 1217 aa14.29□□□□□ -0.12
SMAD5-210ENST00000515005 LRRFIP1Q32MZ4 808 aaKnown RBP14.29□□□□□ -0.12
SMAD5-210ENST00000515005 CNKSR3Q6P9H4 555 aa14.29□□□□□ -0.12
SMAD5-210ENST00000515005 CHST13Q8NET6 341 aa14.29□□□□□ -0.12
SMAD5-210ENST00000515005 ZNF512BQ96KM6 892 aaPredicted RBP14.29□□□□□ -0.12
SMAD5-210ENST00000515005 HOMER2Q9NSB8 354 aa14.29□□□□□ -0.12
SMAD5-210ENST00000515005 FBXO40Q9UH90 709 aa14.29□□□□□ -0.12
SMAD5-210ENST00000515005 ZNF292O60281 2723 aa14.29□□□□□ -0.12
SMAD5-210ENST00000515005 CHD8Q9HCK8 2581 aa14.29□□□□□ -0.12
SMAD5-210ENST00000515005 ABHD14A-ACY1A0A1B0GW23 586 aa14.28□□□□□ -0.12
SMAD5-210ENST00000515005 ASB14A6NK59 587 aa14.28□□□□□ -0.12
SMAD5-210ENST00000515005 NBL1P41271 181 aa14.28□□□□□ -0.12
SMAD5-210ENST00000515005 G3BP1Q13283 466 aaKnown RBP eCLIP14.28□□□□□ -0.12
SMAD5-210ENST00000515005 GPM6BQ13491 265 aa14.28□□□□□ -0.12
SMAD5-210ENST00000515005 TNNI3KQ59H18 835 aa14.28□□□□□ -0.12
SMAD5-210ENST00000515005 MICAL3Q7RTP6 2002 aa14.28□□□□□ -0.12
SMAD5-210ENST00000515005 PRPF38AQ8NAV1 312 aaKnown RBP14.28□□□□□ -0.12
SMAD5-210ENST00000515005 SDR42E1Q8WUS8 393 aa14.28□□□□□ -0.12
SMAD5-210ENST00000515005 ASIC4Q96FT7 647 aa14.28□□□□□ -0.12
SMAD5-210ENST00000515005 CNTNAP3BQ96NU0 1288 aa14.28□□□□□ -0.12
SMAD5-210ENST00000515005 MTG1Q9BT17 334 aaPredicted RBP14.28□□□□□ -0.12
SMAD5-210ENST00000515005 CNTNAP3Q9BZ76 1288 aa14.28□□□□□ -0.12
SMAD5-210ENST00000515005 KANSL2Q9H9L4 492 aa14.28□□□□□ -0.12
SMAD5-210ENST00000515005 INSL6Q9Y581 213 aa14.28□□□□□ -0.12
SMAD5-210ENST00000515005 FPGT-TNNI3KV9GXZ4 949 aa14.28□□□□□ -0.12
SMAD5-210ENST00000515005 DMXL1Q9Y485 3027 aa14.28□□□□□ -0.12
SMAD5-210ENST00000515005 MAGEB6P1A0A0J9YX57 407 aa14.27□□□□□ -0.13
SMAD5-210ENST00000515005 H3BNC9 293 aa14.27□□□□□ -0.13
SMAD5-210ENST00000515005 NBNO60934 754 aa14.27□□□□□ -0.13
SMAD5-210ENST00000515005 ZBED4O75132 1171 aa14.27□□□□□ -0.13
SMAD5-210ENST00000515005 KDM4AO75164 1064 aa14.27□□□□□ -0.13
SMAD5-210ENST00000515005 SIGLEC14Q08ET2 396 aa14.27□□□□□ -0.13
SMAD5-210ENST00000515005 SMAD4Q13485 552 aaKnown RBP14.27□□□□□ -0.13
SMAD5-210ENST00000515005 NFRKBQ6P4R8 1299 aa14.27□□□□□ -0.13
SMAD5-210ENST00000515005 KIAA1211Q6ZU35 1233 aa14.27□□□□□ -0.13
SMAD5-210ENST00000515005 ADSSL1Q8N142 457 aa14.27□□□□□ -0.13
SMAD5-210ENST00000515005 CCDC17Q96LX7 622 aa14.27□□□□□ -0.13
SMAD5-210ENST00000515005 ANTXR1Q9H6X2 564 aa14.27□□□□□ -0.13
SMAD5-210ENST00000515005 DCP1AQ9NPI6 582 aaPredicted RBP14.27□□□□□ -0.13
SMAD5-210ENST00000515005 NOD1Q9Y239 953 aa14.27□□□□□ -0.13
SMAD5-210ENST00000515005 CTDP1Q9Y5B0 961 aaPredicted RBP14.27□□□□□ -0.13
SMAD5-210ENST00000515005 BAZ2AQ9UIF9 1905 aaKnown RBP14.27□□□□□ -0.13
SMAD5-210ENST00000515005 NLRC5Q86WI3 1866 aa14.27□□□□□ -0.13
SMAD5-210ENST00000515005 GALR2O43603 387 aaPredicted RBP14.26□□□□□ -0.13
SMAD5-210ENST00000515005 NCK2O43639 380 aa14.26□□□□□ -0.13
SMAD5-210ENST00000515005 TBX10O75333 385 aa14.26□□□□□ -0.13
SMAD5-210ENST00000515005 CXCL10P02778 98 aa14.26□□□□□ -0.13
SMAD5-210ENST00000515005 DUSP28Q4G0W2 176 aa14.26□□□□□ -0.13
SMAD5-210ENST00000515005 LIN28BQ6ZN17 250 aaKnown RBP eCLIP14.26□□□□□ -0.13
SMAD5-210ENST00000515005 AFAP1L1Q8TED9 768 aa14.26□□□□□ -0.13
SMAD5-210ENST00000515005 KIFC2Q96AC6 838 aa14.26□□□□□ -0.13
SMAD5-210ENST00000515005 CTAGE1Q96RT6 745 aa14.26□□□□□ -0.13
SMAD5-210ENST00000515005 CRNKL1Q9BZJ0 848 aaKnown RBP14.26□□□□□ -0.13
SMAD5-210ENST00000515005 SLC38A10Q9HBR0 1119 aa14.26□□□□□ -0.13
SMAD5-210ENST00000515005 A1CFQ9NQ94 594 aaKnown RBP14.26□□□□□ -0.13
SMAD5-210ENST00000515005 GPHNQ9NQX3 736 aaPredicted RBP14.26□□□□□ -0.13
SMAD5-210ENST00000515005 CHD6Q8TD26 2715 aa14.25□□□□□ -0.13
SMAD5-210ENST00000515005 USP17L12C9JPN9 530 aa14.25□□□□□ -0.13
SMAD5-210ENST00000515005 USP17L21D6R901 530 aa14.25□□□□□ -0.13
SMAD5-210ENST00000515005 PDGFBP01127 241 aaPredicted RBP14.25□□□□□ -0.13
SMAD5-210ENST00000515005 SELPP16109 830 aa14.25□□□□□ -0.13
SMAD5-210ENST00000515005 CDK8P49336 464 aa14.25□□□□□ -0.13
SMAD5-210ENST00000515005 HYAL1Q12794 435 aa14.25□□□□□ -0.13
SMAD5-210ENST00000515005 MKRN4PQ13434 485 aaPredicted RBP14.25□□□□□ -0.13
SMAD5-210ENST00000515005 LRRC8DQ7L1W4 858 aa14.25□□□□□ -0.13
SMAD5-210ENST00000515005 CAGE1Q8TC20 777 aa14.25□□□□□ -0.13
SMAD5-210ENST00000515005 SP7Q8TDD2 431 aaPredicted RBP14.25□□□□□ -0.13
SMAD5-210ENST00000515005 RMDN1Q96DB5 314 aa14.25□□□□□ -0.13
SMAD5-210ENST00000515005 GPR108Q9NPR9 543 aa14.25□□□□□ -0.13
SMAD5-210ENST00000515005 CD207Q9UJ71 328 aa14.25□□□□□ -0.13
SMAD5-210ENST00000515005 DNAH14Q0VDD8 3507 aa14.25□□□□□ -0.13
SMAD5-210ENST00000515005 CYP2D7A0A087X1C5 515 aa14.24□□□□□ -0.13
SMAD5-210ENST00000515005 PNMA6EA0A0J9YXQ4 647 aa14.24□□□□□ -0.13
SMAD5-210ENST00000515005 LOC730098B7Z3J9 87 aa14.24□□□□□ -0.13
SMAD5-210ENST00000515005 NDUFB10O96000 172 aa14.24□□□□□ -0.13
SMAD5-210ENST00000515005 GTF2F1P35269 517 aaKnown RBP eCLIP14.24□□□□□ -0.13
SMAD5-210ENST00000515005 CPT1AP50416 773 aa14.24□□□□□ -0.13
SMAD5-210ENST00000515005 HTRA4P83105 476 aaPredicted RBP14.24□□□□□ -0.13
SMAD5-210ENST00000515005 PTPN11Q06124 597 aaPredicted RBP14.24□□□□□ -0.13
SMAD5-210ENST00000515005 IKBKEQ14164 716 aa14.24□□□□□ -0.13
SMAD5-210ENST00000515005 PTGISQ16647 500 aa14.24□□□□□ -0.13
SMAD5-210ENST00000515005 DGLUCYQ7Z3D6 616 aa14.24□□□□□ -0.13
SMAD5-210ENST00000515005 FRMD5Q7Z6J6 570 aa14.24□□□□□ -0.13
SMAD5-210ENST00000515005 DHX38Q92620 1227 aaKnown RBP14.24□□□□□ -0.13
SMAD5-210ENST00000515005 NKD2Q969F2 451 aaPredicted RBP14.24□□□□□ -0.13
SMAD5-210ENST00000515005 SAMD11Q96NU1 681 aa14.24□□□□□ -0.13
SMAD5-210ENST00000515005 COG6Q9Y2V7 657 aa14.24□□□□□ -0.13
SMAD5-210ENST00000515005 CEP250Q9BV73 2442 aa14.24□□□□□ -0.13
SMAD5-210ENST00000515005 SPTBN2O15020 2390 aa14.24□□□□□ -0.13
SMAD5-210ENST00000515005 LCTP09848 1927 aa14.23□□□□□ -0.13
SMAD5-210ENST00000515005 ATRXP46100 2492 aa14.23□□□□□ -0.13
SMAD5-210ENST00000515005 ZFHX4Q86UP3 3567 aa14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms