RNA–Protein interactions for RNA: ENST00000514610.1

HMGCS1-207, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 2

Gene HMGCS1, Length 555 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-207ENST00000514610 TRAF6Q9Y4K3 522 aa7.54□□□□□ -1.2
HMGCS1-207ENST00000514610 MSCO60682 206 aa7.53□□□□□ -1.2
HMGCS1-207ENST00000514610 LTBRP36941 435 aa7.53□□□□□ -1.2
HMGCS1-207ENST00000514610 ERVFC1P60507 584 aa7.53□□□□□ -1.2
HMGCS1-207ENST00000514610 TRIM61Q5EBN2 209 aa7.53□□□□□ -1.2
HMGCS1-207ENST00000514610 ARTNQ5T4W7 220 aa7.53□□□□□ -1.2
HMGCS1-207ENST00000514610 STYK1Q6J9G0 422 aa7.53□□□□□ -1.2
HMGCS1-207ENST00000514610 SLCO6A1Q86UG4 719 aa7.53□□□□□ -1.2
HMGCS1-207ENST00000514610 SYNPOQ8N3V7 929 aa7.53□□□□□ -1.2
HMGCS1-207ENST00000514610 RCBTB1Q8NDN9 531 aa7.53□□□□□ -1.2
HMGCS1-207ENST00000514610 DCAF4Q8WV16 495 aa7.53□□□□□ -1.2
HMGCS1-207ENST00000514610 JMJD8Q96S16 334 aa7.53□□□□□ -1.2
HMGCS1-207ENST00000514610 PHF20Q9BVI0 1012 aa7.53□□□□□ -1.2
HMGCS1-207ENST00000514610 NDOR1Q9UHB4 597 aa7.53□□□□□ -1.2
HMGCS1-207ENST00000514610 SBNO2Q9Y2G9 1366 aa7.52□□□□□ -1.21
HMGCS1-207ENST00000514610 GABREP78334 506 aa7.52□□□□□ -1.21
HMGCS1-207ENST00000514610 DUSP4Q13115 394 aa7.52□□□□□ -1.21
HMGCS1-207ENST00000514610 KCNAB2Q13303 367 aa7.52□□□□□ -1.21
HMGCS1-207ENST00000514610 PABPC4Q13310 644 aaKnown RBP eCLIP7.52□□□□□ -1.21
HMGCS1-207ENST00000514610 ZNF792Q3KQV3 632 aa7.52□□□□□ -1.21
HMGCS1-207ENST00000514610 DALRD3Q5D0E6 543 aaKnown RBP7.52□□□□□ -1.21
HMGCS1-207ENST00000514610 ABI1Q8IZP0 508 aa7.52□□□□□ -1.21
HMGCS1-207ENST00000514610 AGBL5Q8NDL9 886 aa7.52□□□□□ -1.21
HMGCS1-207ENST00000514610 GSTCDQ8NEC7 633 aa7.52□□□□□ -1.21
HMGCS1-207ENST00000514610 DIO2Q92813 273 aa7.52□□□□□ -1.21
HMGCS1-207ENST00000514610 PTPRN2Q92932 1015 aa7.52□□□□□ -1.21
HMGCS1-207ENST00000514610 TRIM39Q9HCM9 518 aa7.52□□□□□ -1.21
HMGCS1-207ENST00000514610 SFMBT1Q9UHJ3 866 aa7.52□□□□□ -1.21
HMGCS1-207ENST00000514610 FBXL7Q9UJT9 491 aa7.52□□□□□ -1.21
HMGCS1-207ENST00000514610 LOC101059915A0A1B0GWI6 518 aaPredicted RBP7.51□□□□□ -1.21
HMGCS1-207ENST00000514610 C7orf72A4D263 438 aa7.51□□□□□ -1.21
HMGCS1-207ENST00000514610 KCNQ2O43526 872 aa7.51□□□□□ -1.21
HMGCS1-207ENST00000514610 TBC1D8O95759 1140 aa7.51□□□□□ -1.21
HMGCS1-207ENST00000514610 KIR2DL1P43626 348 aaPredicted RBP7.51□□□□□ -1.21
HMGCS1-207ENST00000514610 KIR2DL2P43627 348 aaPredicted RBP7.51□□□□□ -1.21
HMGCS1-207ENST00000514610 GYS2P54840 703 aa7.51□□□□□ -1.21
HMGCS1-207ENST00000514610 KIR3DS1Q14943 382 aa7.51□□□□□ -1.21
HMGCS1-207ENST00000514610 HSF5Q4G112 596 aaPredicted RBP7.51□□□□□ -1.21
HMGCS1-207ENST00000514610 FNDC3BQ53EP0 1204 aaKnown RBP7.51□□□□□ -1.21
HMGCS1-207ENST00000514610 TIGD5Q53EQ6 642 aa7.51□□□□□ -1.21
HMGCS1-207ENST00000514610 HLA-DQA1Q5Y7H0 255 aa7.51□□□□□ -1.21
HMGCS1-207ENST00000514610 BRAPQ7Z569 592 aa7.51□□□□□ -1.21
HMGCS1-207ENST00000514610 FGD2Q7Z6J4 655 aa7.51□□□□□ -1.21
HMGCS1-207ENST00000514610 ANKS4BQ8N8V4 417 aa7.51□□□□□ -1.21
HMGCS1-207ENST00000514610 DPF3Q92784 378 aa7.51□□□□□ -1.21
HMGCS1-207ENST00000514610 SYTL4Q96C24 671 aaPredicted RBP7.51□□□□□ -1.21
HMGCS1-207ENST00000514610 SCLYQ96I15 445 aa7.51□□□□□ -1.21
HMGCS1-207ENST00000514610 ZFP64Q9NPA5 681 aa7.51□□□□□ -1.21
HMGCS1-207ENST00000514610 WDR3Q9UNX4 943 aaKnown RBP eCLIP7.51□□□□□ -1.21
HMGCS1-207ENST00000514610 TRBV23OR9-2A0A075B6M9 112 aa7.5□□□□□ -1.21
HMGCS1-207ENST00000514610 PPP1R11O60927 126 aaPredicted RBP7.5□□□□□ -1.21
HMGCS1-207ENST00000514610 RFPL3O75679 317 aa7.5□□□□□ -1.21
HMGCS1-207ENST00000514610 TRHRP34981 398 aaPredicted RBP7.5□□□□□ -1.21
HMGCS1-207ENST00000514610 IQCEQ6IPM2 695 aa7.5□□□□□ -1.21
HMGCS1-207ENST00000514610 CEP128Q6ZU80 1094 aa7.5□□□□□ -1.21
HMGCS1-207ENST00000514610 MAMDC2Q7Z304 686 aaPredicted RBP7.5□□□□□ -1.21
HMGCS1-207ENST00000514610 PDZD8Q8NEN9 1154 aa7.5□□□□□ -1.21
HMGCS1-207ENST00000514610 PLCD4Q9BRC7 762 aa7.5□□□□□ -1.21
HMGCS1-207ENST00000514610 GPR27Q9NS67 375 aa7.5□□□□□ -1.21
HMGCS1-207ENST00000514610 CTNND2Q9UQB3 1225 aa7.5□□□□□ -1.21
HMGCS1-207ENST00000514610 A0A1W2PQ45 241 aaPredicted RBP7.49□□□□□ -1.21
HMGCS1-207ENST00000514610 A0A1W2PQY0 241 aa7.49□□□□□ -1.21
HMGCS1-207ENST00000514610 HPXP02790 462 aa7.49□□□□□ -1.21
HMGCS1-207ENST00000514610 SDSP20132 328 aa7.49□□□□□ -1.21
HMGCS1-207ENST00000514610 GDNFP39905 211 aa7.49□□□□□ -1.21
HMGCS1-207ENST00000514610 GP2P55259 537 aaKnown RBP7.49□□□□□ -1.21
HMGCS1-207ENST00000514610 RTP1P59025 263 aa7.49□□□□□ -1.21
HMGCS1-207ENST00000514610 RSPO2Q6UXX9 243 aaPredicted RBP7.49□□□□□ -1.21
HMGCS1-207ENST00000514610 DHX37Q8IY37 1157 aaKnown RBP7.49□□□□□ -1.21
HMGCS1-207ENST00000514610 NINJ1Q92982 152 aa7.49□□□□□ -1.21
HMGCS1-207ENST00000514610 C19orf44Q9H6X5 657 aa7.49□□□□□ -1.21
HMGCS1-207ENST00000514610 RC3H2Q9HBD1 1191 aaKnown RBP7.49□□□□□ -1.21
HMGCS1-207ENST00000514610 NRDCO43847 1150 aa7.48□□□□□ -1.21
HMGCS1-207ENST00000514610 DNAJC8O75937 253 aaPredicted RBP7.48□□□□□ -1.21
HMGCS1-207ENST00000514610 RASGRP1O95267 797 aa7.48□□□□□ -1.21
HMGCS1-207ENST00000514610 MSL3P1P0C860 447 aa7.48□□□□□ -1.21
HMGCS1-207ENST00000514610 GPR85P60893 370 aa7.48□□□□□ -1.21
HMGCS1-207ENST00000514610 CHRNEQ04844 493 aa7.48□□□□□ -1.21
HMGCS1-207ENST00000514610 NLRP10Q86W26 655 aa7.48□□□□□ -1.21
HMGCS1-207ENST00000514610 JAMLQ86YT9 394 aa7.48□□□□□ -1.21
HMGCS1-207ENST00000514610 ZFYVE21Q9BQ24 234 aa7.48□□□□□ -1.21
HMGCS1-207ENST00000514610 IMPACTQ9P2X3 320 aa7.48□□□□□ -1.21
HMGCS1-207ENST00000514610 PPARGC1AQ9UBK2 798 aaKnown RBP7.48□□□□□ -1.21
HMGCS1-207ENST00000514610 GULP1Q9UBP9 304 aa7.48□□□□□ -1.21
HMGCS1-207ENST00000514610 FBLN5Q9UBX5 448 aa7.48□□□□□ -1.21
HMGCS1-207ENST00000514610 PCDHA9Q9Y5H5 950 aa7.48□□□□□ -1.21
HMGCS1-207ENST00000514610 PCDHA2Q9Y5H9 948 aa7.48□□□□□ -1.21
HMGCS1-207ENST00000514610 OAS3Q9Y6K5 1087 aaKnown RBP7.48□□□□□ -1.21
HMGCS1-207ENST00000514610 FITM1A5D6W6 292 aa7.47□□□□□ -1.21
HMGCS1-207ENST00000514610 IRS4O14654 1257 aaPredicted RBP7.47□□□□□ -1.21
HMGCS1-207ENST00000514610 PSPNO60542 156 aa7.47□□□□□ -1.21
HMGCS1-207ENST00000514610 CRTAMO95727 393 aa7.47□□□□□ -1.21
HMGCS1-207ENST00000514610 BCL6P41182 706 aa7.47□□□□□ -1.21
HMGCS1-207ENST00000514610 MVKQ03426 396 aa7.47□□□□□ -1.21
HMGCS1-207ENST00000514610 NR0B2Q15466 257 aa7.47□□□□□ -1.21
HMGCS1-207ENST00000514610 TM4SF20Q53R12 229 aa7.47□□□□□ -1.21
HMGCS1-207ENST00000514610 LBX2Q6XYB7 198 aa7.47□□□□□ -1.21
HMGCS1-207ENST00000514610 NIM1KQ8IY84 436 aa7.47□□□□□ -1.21
HMGCS1-207ENST00000514610 IFNL3Q8IZI9 196 aa7.47□□□□□ -1.21
HMGCS1-207ENST00000514610 CCDC120Q96HB5 630 aa7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms