RNA–Protein interactions for RNA: ENST00000513984.5

VCAN-211, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 1,825 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-211ENST00000513984 USP17L17D6RBQ6 530 aa16.86■□□□□ 0.29
VCAN-211ENST00000513984 USP17L19D6RCP7 530 aa16.86■□□□□ 0.29
VCAN-211ENST00000513984 USP17L20D6RJB6 530 aa16.86■□□□□ 0.29
VCAN-211ENST00000513984 PLA2G6O60733 806 aa16.86■□□□□ 0.29
VCAN-211ENST00000513984 ATP1A3P13637 1013 aa16.86■□□□□ 0.29
VCAN-211ENST00000513984 TECP42680 631 aa16.86■□□□□ 0.29
VCAN-211ENST00000513984 USP17L24Q0WX57 530 aa16.86■□□□□ 0.29
VCAN-211ENST00000513984 CCDC144BQ3MJ40 725 aa16.86■□□□□ 0.29
VCAN-211ENST00000513984 USP17L6PQ6QN14 398 aa16.86■□□□□ 0.29
VCAN-211ENST00000513984 TEX2Q8IWB9 1127 aa16.86■□□□□ 0.29
VCAN-211ENST00000513984 RASSF8Q8NHQ8 419 aa16.86■□□□□ 0.29
VCAN-211ENST00000513984 MMTAG2Q9BU76 263 aaKnown RBP16.86■□□□□ 0.29
VCAN-211ENST00000513984 ANO3Q9BYT9 981 aa16.86■□□□□ 0.29
VCAN-211ENST00000513984 BLZF1Q9H2G9 400 aa16.86■□□□□ 0.29
VCAN-211ENST00000513984 FANCLQ9NW38 375 aa16.86■□□□□ 0.29
VCAN-211ENST00000513984 TXKP42681 527 aa16.86■□□□□ 0.29
VCAN-211ENST00000513984 USP11P51784 963 aa16.86■□□□□ 0.29
VCAN-211ENST00000513984 SNAP25P60880 206 aa16.86■□□□□ 0.29
VCAN-211ENST00000513984 TRAF1Q13077 416 aa16.86■□□□□ 0.29
VCAN-211ENST00000513984 PDIA5Q14554 519 aa16.86■□□□□ 0.29
VCAN-211ENST00000513984 TMEM266Q2M3C6 531 aa16.86■□□□□ 0.29
VCAN-211ENST00000513984 FAM83BQ5T0W9 1011 aa16.86■□□□□ 0.29
VCAN-211ENST00000513984 MOXD1Q6UVY6 613 aa16.86■□□□□ 0.29
VCAN-211ENST00000513984 MED15Q96RN5 788 aa16.86■□□□□ 0.29
VCAN-211ENST00000513984 RAB34Q9BZG1 259 aa16.86■□□□□ 0.29
VCAN-211ENST00000513984 RMND1Q9NWS8 449 aa16.86■□□□□ 0.29
VCAN-211ENST00000513984 DDX25Q9UHL0 483 aaKnown RBP16.86■□□□□ 0.29
VCAN-211ENST00000513984 CNOT7Q9UIV1 285 aaKnown RBP16.86■□□□□ 0.29
VCAN-211ENST00000513984 ZNF18P17022 549 aa16.85■□□□□ 0.29
VCAN-211ENST00000513984 PLCG1P19174 1290 aa16.85■□□□□ 0.29
VCAN-211ENST00000513984 SEMA3FQ13275 785 aa16.85■□□□□ 0.29
VCAN-211ENST00000513984 LRRC15Q8TF66 581 aa16.85■□□□□ 0.29
VCAN-211ENST00000513984 CRYGNQ8WXF5 182 aa16.85■□□□□ 0.29
VCAN-211ENST00000513984 MBOAT7Q96N66 472 aa16.85■□□□□ 0.29
VCAN-211ENST00000513984 GINM1Q9NU53 330 aa16.85■□□□□ 0.29
VCAN-211ENST00000513984 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.85■□□□□ 0.29
VCAN-211ENST00000513984 NFE2L3Q9Y4A8 694 aa16.85■□□□□ 0.29
VCAN-211ENST00000513984 PARP14Q460N5 1801 aa16.85■□□□□ 0.29
VCAN-211ENST00000513984 ZNF541Q9H0D2 1346 aa16.85■□□□□ 0.29
VCAN-211ENST00000513984 CYP3A7-CYP3A51PA0A087WV96 503 aa16.84■□□□□ 0.29
VCAN-211ENST00000513984 PPP1R3GB7ZBB8 358 aa16.84■□□□□ 0.29
VCAN-211ENST00000513984 RPN1P04843 607 aaKnown RBP16.84■□□□□ 0.29
VCAN-211ENST00000513984 CD44P16070 742 aaKnown RBP16.84■□□□□ 0.29
VCAN-211ENST00000513984 CYP3A7P24462 503 aa16.84■□□□□ 0.29
VCAN-211ENST00000513984 USH1GQ495M9 461 aa16.84■□□□□ 0.29
VCAN-211ENST00000513984 SAMD7Q7Z3H4 446 aa16.84■□□□□ 0.29
VCAN-211ENST00000513984 CHURC1Q8WUH1 139 aa16.84■□□□□ 0.29
VCAN-211ENST00000513984 RANBP17Q9H2T7 1088 aaKnown RBP16.84■□□□□ 0.29
VCAN-211ENST00000513984 IMPACTQ9P2X3 320 aa16.84■□□□□ 0.29
VCAN-211ENST00000513984 LRWD1Q9UFC0 647 aa16.84■□□□□ 0.29
VCAN-211ENST00000513984 GJA3Q9Y6H8 435 aa16.84■□□□□ 0.29
VCAN-211ENST00000513984 OPLAHO14841 1288 aa16.84■□□□□ 0.29
VCAN-211ENST00000513984 CBFA2T2O43439 604 aa16.84■□□□□ 0.29
VCAN-211ENST00000513984 FOSP01100 380 aaPredicted RBP16.84■□□□□ 0.29
VCAN-211ENST00000513984 KCNB1Q14721 858 aa16.84■□□□□ 0.29
VCAN-211ENST00000513984 KIF4BQ2VIQ3 1234 aa16.84■□□□□ 0.29
VCAN-211ENST00000513984 ZNF658Q5TYW1 1059 aaPredicted RBP16.84■□□□□ 0.29
VCAN-211ENST00000513984 FAM160B2Q86V87 743 aa16.84■□□□□ 0.29
VCAN-211ENST00000513984 TRMT44Q8IYL2 757 aaKnown RBP16.84■□□□□ 0.29
VCAN-211ENST00000513984 HAS1Q92839 578 aa16.84■□□□□ 0.29
VCAN-211ENST00000513984 HACL1Q9UJ83 578 aa16.84■□□□□ 0.29
VCAN-211ENST00000513984 SYNRGQ9UMZ2 1314 aa16.83■□□□□ 0.29
VCAN-211ENST00000513984 RBBP6Q7Z6E9 1792 aaKnown RBP16.83■□□□□ 0.29
VCAN-211ENST00000513984 PIK3CDO00329 1044 aa16.83■□□□□ 0.28
VCAN-211ENST00000513984 TBC1D10BQ4KMP7 808 aaPredicted RBP16.83■□□□□ 0.28
VCAN-211ENST00000513984 KIAA1524Q8TCG1 905 aa16.83■□□□□ 0.28
VCAN-211ENST00000513984 CALML4Q96GE6 196 aa16.83■□□□□ 0.28
VCAN-211ENST00000513984 P2RX7Q99572 595 aaKnown RBP16.83■□□□□ 0.28
VCAN-211ENST00000513984 GLIS2Q9BZE0 524 aaPredicted RBP16.83■□□□□ 0.28
VCAN-211ENST00000513984 FEM1BQ9UK73 627 aa16.83■□□□□ 0.28
VCAN-211ENST00000513984 SCAF8Q9UPN6 1271 aaKnown RBP16.83■□□□□ 0.28
VCAN-211ENST00000513984 ASTN2O75129 1339 aaPredicted RBP16.83■□□□□ 0.28
VCAN-211ENST00000513984 PHIPQ8WWQ0 1821 aa16.82■□□□□ 0.28
VCAN-211ENST00000513984 KLRC4O43908 158 aa16.82■□□□□ 0.28
VCAN-211ENST00000513984 UBASH3AP57075 661 aa16.82■□□□□ 0.28
VCAN-211ENST00000513984 GRB10Q13322 594 aa16.82■□□□□ 0.28
VCAN-211ENST00000513984 SPATA1Q5VX52 437 aa16.82■□□□□ 0.28
VCAN-211ENST00000513984 CACTINQ8WUQ7 758 aaKnown RBP16.82■□□□□ 0.28
VCAN-211ENST00000513984 PLIN2Q99541 437 aa16.82■□□□□ 0.28
VCAN-211ENST00000513984 KCNMB3Q9NPA1 279 aa16.82■□□□□ 0.28
VCAN-211ENST00000513984 STK17AQ9UEE5 414 aa16.82■□□□□ 0.28
VCAN-211ENST00000513984 PYCARDQ9ULZ3 195 aa16.82■□□□□ 0.28
VCAN-211ENST00000513984 POLR2AP24928 1970 aaKnown RBP16.82■□□□□ 0.28
VCAN-211ENST00000513984 SERPINC1P01008 464 aa16.82■□□□□ 0.28
VCAN-211ENST00000513984 SREBF1P36956 1147 aa16.82■□□□□ 0.28
VCAN-211ENST00000513984 GSDMDP57764 484 aa16.82■□□□□ 0.28
VCAN-211ENST00000513984 ARHGAP4P98171 946 aa16.82■□□□□ 0.28
VCAN-211ENST00000513984 ZYXQ15942 572 aaKnown RBP16.82■□□□□ 0.28
VCAN-211ENST00000513984 SMYD4Q8IYR2 804 aaPredicted RBP16.82■□□□□ 0.28
VCAN-211ENST00000513984 DEFB129Q9H1M3 183 aa16.82■□□□□ 0.28
VCAN-211ENST00000513984 POTEMA6NI47 508 aa16.81■□□□□ 0.28
VCAN-211ENST00000513984 SPDYE3A6NKU9 549 aa16.81■□□□□ 0.28
VCAN-211ENST00000513984 CTNND1O60716 968 aaKnown RBP16.81■□□□□ 0.28
VCAN-211ENST00000513984 RHOBTB3O94955 611 aa16.81■□□□□ 0.28
VCAN-211ENST00000513984 LRMPQ12912 555 aa16.81■□□□□ 0.28
VCAN-211ENST00000513984 FILIP1Q7Z7B0 1213 aa16.81■□□□□ 0.28
VCAN-211ENST00000513984 LRRC8AQ8IWT6 810 aa16.81■□□□□ 0.28
VCAN-211ENST00000513984 PNMA5Q96PV4 448 aa16.81■□□□□ 0.28
VCAN-211ENST00000513984 C7orf25Q9BPX7 421 aa16.81■□□□□ 0.28
VCAN-211ENST00000513984 ZNF341Q9BYN7 854 aa16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms