RNA–Protein interactions for RNA: ENST00000513538.1

TCOF1-212, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 5

Gene TCOF1, Length 701 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-212ENST00000513538 AP5M1Q9H0R1 490 aa11.44□□□□□ -0.58
TCOF1-212ENST00000513538 TRMT13Q9NUP7 481 aaKnown RBP11.44□□□□□ -0.58
TCOF1-212ENST00000513538 CCPG1Q9ULG6 757 aa11.44□□□□□ -0.58
TCOF1-212ENST00000513538 STX8Q9UNK0 236 aa11.44□□□□□ -0.58
TCOF1-212ENST00000513538 COL4A4P53420 1690 aaPredicted RBP11.43□□□□□ -0.58
TCOF1-212ENST00000513538 TTC41PQ6P2S7 1318 aa11.43□□□□□ -0.58
TCOF1-212ENST00000513538 NFIBO00712 420 aa11.43□□□□□ -0.58
TCOF1-212ENST00000513538 ARHGEF15O94989 841 aa11.43□□□□□ -0.58
TCOF1-212ENST00000513538 CYP2C9P11712 490 aa11.43□□□□□ -0.58
TCOF1-212ENST00000513538 SLC16A2P36021 539 aa11.43□□□□□ -0.58
TCOF1-212ENST00000513538 ALDH5A1P51649 535 aaPredicted RBP11.43□□□□□ -0.58
TCOF1-212ENST00000513538 FSD1Q9BTV5 496 aa11.43□□□□□ -0.58
TCOF1-212ENST00000513538 NACAP1Q9BZK3 213 aa11.43□□□□□ -0.58
TCOF1-212ENST00000513538 ALDH8A1Q9H2A2 487 aaPredicted RBP11.43□□□□□ -0.58
TCOF1-212ENST00000513538 RANBP17Q9H2T7 1088 aaKnown RBP11.43□□□□□ -0.58
TCOF1-212ENST00000513538 SLC28A3Q9HAS3 691 aa11.43□□□□□ -0.58
TCOF1-212ENST00000513538 VTA1Q9NP79 307 aa11.43□□□□□ -0.58
TCOF1-212ENST00000513538 MTMR7Q9Y216 660 aa11.43□□□□□ -0.58
TCOF1-212ENST00000513538 Q9Y3F1 56 aa11.43□□□□□ -0.58
TCOF1-212ENST00000513538 TRIP12Q14669 1992 aaPredicted RBP11.43□□□□□ -0.58
TCOF1-212ENST00000513538 SALL3Q9BXA9 1300 aa11.42□□□□□ -0.58
TCOF1-212ENST00000513538 EPOPA6NHQ4 379 aa11.42□□□□□ -0.58
TCOF1-212ENST00000513538 RFXAPO00287 272 aa11.42□□□□□ -0.58
TCOF1-212ENST00000513538 ICAM1P05362 532 aa11.42□□□□□ -0.58
TCOF1-212ENST00000513538 MRPS5P82675 430 aaKnown RBP11.42□□□□□ -0.58
TCOF1-212ENST00000513538 PURAQ00577 322 aaKnown RBP11.42□□□□□ -0.58
TCOF1-212ENST00000513538 TFF2Q03403 129 aa11.42□□□□□ -0.58
TCOF1-212ENST00000513538 BAATQ14032 418 aaPredicted RBP11.42□□□□□ -0.58
TCOF1-212ENST00000513538 DUSP28Q4G0W2 176 aa11.42□□□□□ -0.58
TCOF1-212ENST00000513538 PPP2R2DQ66LE6 453 aa11.42□□□□□ -0.58
TCOF1-212ENST00000513538 SLC30A10Q6XR72 485 aa11.42□□□□□ -0.58
TCOF1-212ENST00000513538 KIAA1211Q6ZU35 1233 aa11.42□□□□□ -0.58
TCOF1-212ENST00000513538 MTIF3Q9H2K0 278 aaKnown RBP11.42□□□□□ -0.58
TCOF1-212ENST00000513538 PCDHB15Q9Y5E8 787 aa11.42□□□□□ -0.58
TCOF1-212ENST00000513538 SLC4A7Q9Y6M7 1214 aa11.42□□□□□ -0.58
TCOF1-212ENST00000513538 TNKSO95271 1327 aa11.41□□□□□ -0.58
TCOF1-212ENST00000513538 TSPY2A6NKD2 308 aa11.41□□□□□ -0.58
TCOF1-212ENST00000513538 ZEB2O60315 1214 aa11.41□□□□□ -0.58
TCOF1-212ENST00000513538 SLC3A2P08195 630 aaKnown RBP11.41□□□□□ -0.58
TCOF1-212ENST00000513538 CCDC96Q2M329 555 aa11.41□□□□□ -0.58
TCOF1-212ENST00000513538 BTNL9Q6UXG8 535 aa11.41□□□□□ -0.58
TCOF1-212ENST00000513538 DEFB128Q7Z7B8 93 aa11.41□□□□□ -0.58
TCOF1-212ENST00000513538 MICALL1Q8N3F8 863 aa11.41□□□□□ -0.58
TCOF1-212ENST00000513538 CLEC4DQ8WXI8 215 aa11.41□□□□□ -0.58
TCOF1-212ENST00000513538 UHRF1Q96T88 793 aaPredicted RBP11.41□□□□□ -0.58
TCOF1-212ENST00000513538 ANAPC4Q9UJX5 808 aa11.41□□□□□ -0.58
TCOF1-212ENST00000513538 PCDHA11Q9Y5I1 949 aa11.41□□□□□ -0.58
TCOF1-212ENST00000513538 FRMPD2Q68DX3 1309 aaPredicted RBP11.4□□□□□ -0.58
TCOF1-212ENST00000513538 RBM47A0AV96 593 aaKnown RBP11.4□□□□□ -0.58
TCOF1-212ENST00000513538 ZBBXA8MT70 800 aa11.4□□□□□ -0.58
TCOF1-212ENST00000513538 RANBP6O60518 1105 aaKnown RBP11.4□□□□□ -0.58
TCOF1-212ENST00000513538 CA3P07451 260 aa11.4□□□□□ -0.58
TCOF1-212ENST00000513538 MYL3P08590 195 aa11.4□□□□□ -0.58
TCOF1-212ENST00000513538 FGRP09769 529 aa11.4□□□□□ -0.58
TCOF1-212ENST00000513538 ATP2A2P16615 1042 aaKnown RBP11.4□□□□□ -0.58
TCOF1-212ENST00000513538 KCNQ1P51787 676 aa11.4□□□□□ -0.58
TCOF1-212ENST00000513538 SYDE2Q5VT97 1194 aa11.4□□□□□ -0.58
TCOF1-212ENST00000513538 KRT40Q6A162 431 aa11.4□□□□□ -0.58
TCOF1-212ENST00000513538 SPRED2Q7Z698 418 aa11.4□□□□□ -0.58
TCOF1-212ENST00000513538 RPUSD2Q8IZ73 545 aaKnown RBP11.4□□□□□ -0.58
TCOF1-212ENST00000513538 DCAF4Q8WV16 495 aa11.4□□□□□ -0.58
TCOF1-212ENST00000513538 COPS5Q92905 334 aa11.4□□□□□ -0.58
TCOF1-212ENST00000513538 SEZ6LQ9BYH1 1024 aa11.4□□□□□ -0.58
TCOF1-212ENST00000513538 WDR11Q9BZH6 1224 aa11.4□□□□□ -0.58
TCOF1-212ENST00000513538 CERS4Q9HA82 394 aa11.4□□□□□ -0.58
TCOF1-212ENST00000513538 ERC2O15083 957 aa11.39□□□□□ -0.59
TCOF1-212ENST00000513538 ORC4O43929 436 aa11.39□□□□□ -0.59
TCOF1-212ENST00000513538 BMP1P13497 986 aa11.39□□□□□ -0.59
TCOF1-212ENST00000513538 MX1P20591 662 aa11.39□□□□□ -0.59
TCOF1-212ENST00000513538 LRRFIP1Q32MZ4 808 aaKnown RBP11.39□□□□□ -0.59
TCOF1-212ENST00000513538 NBPF20Q3BBV1 942 aa11.39□□□□□ -0.59
TCOF1-212ENST00000513538 OR6J1Q8NGC5 347 aa11.39□□□□□ -0.59
TCOF1-212ENST00000513538 CTAGE1Q96RT6 745 aa11.39□□□□□ -0.59
TCOF1-212ENST00000513538 TMEM47Q9BQJ4 181 aa11.39□□□□□ -0.59
TCOF1-212ENST00000513538 MTG1Q9BT17 334 aaPredicted RBP11.39□□□□□ -0.59
TCOF1-212ENST00000513538 GPCPD1Q9NPB8 672 aa11.39□□□□□ -0.59
TCOF1-212ENST00000513538 ADD3Q9UEY8 706 aaKnown RBP11.39□□□□□ -0.59
TCOF1-212ENST00000513538 MTCH2Q9Y6C9 303 aa11.39□□□□□ -0.59
TCOF1-212ENST00000513538 KIAA1217Q5T5P2 1943 aa11.39□□□□□ -0.59
TCOF1-212ENST00000513538 BRWD1Q9NSI6 2320 aa11.38□□□□□ -0.59
TCOF1-212ENST00000513538 A0A0D9SFI3 127 aa11.38□□□□□ -0.59
TCOF1-212ENST00000513538 PTPDC1A2A3K4 754 aa11.38□□□□□ -0.59
TCOF1-212ENST00000513538 ARIH2O95376 493 aa11.38□□□□□ -0.59
TCOF1-212ENST00000513538 PFKMP08237 780 aa11.38□□□□□ -0.59
TCOF1-212ENST00000513538 PDHBP11177 359 aa11.38□□□□□ -0.59
TCOF1-212ENST00000513538 POU3F3P20264 500 aaPredicted RBP11.38□□□□□ -0.59
TCOF1-212ENST00000513538 EDNRBP24530 442 aa11.38□□□□□ -0.59
TCOF1-212ENST00000513538 CALML3P27482 149 aa11.38□□□□□ -0.59
TCOF1-212ENST00000513538 CPT1AP50416 773 aa11.38□□□□□ -0.59
TCOF1-212ENST00000513538 TAP1Q03518 808 aa11.38□□□□□ -0.59
TCOF1-212ENST00000513538 FAM47CQ5HY64 1035 aa11.38□□□□□ -0.59
TCOF1-212ENST00000513538 PPP4R3BQ5MIZ7 849 aa11.38□□□□□ -0.59
TCOF1-212ENST00000513538 POLR3EQ9NVU0 708 aa11.38□□□□□ -0.59
TCOF1-212ENST00000513538 LAMA4Q16363 1823 aa11.37□□□□□ -0.59
TCOF1-212ENST00000513538 MYH6P13533 1939 aa11.37□□□□□ -0.59
TCOF1-212ENST00000513538 LOC102724159A0A0B4J2E5 919 aa11.37□□□□□ -0.59
TCOF1-212ENST00000513538 A6NJR5 290 aa11.37□□□□□ -0.59
TCOF1-212ENST00000513538 IQCF3P0C7M6 154 aa11.37□□□□□ -0.59
TCOF1-212ENST00000513538 SUPT20HL2P0C7V6 817 aa11.37□□□□□ -0.59
TCOF1-212ENST00000513538 TOP1P11387 765 aaKnown RBP11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms