RNA–Protein interactions for RNA: ENST00000511633.5

NEK1-207, Transcript of NIMA related kinase 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NEK1, Length 5,536 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1-207ENST00000511633 PDE6CP51160 858 aa9.95□□□□□ -0.82
NEK1-207ENST00000511633 RBM6P78332 1123 aaKnown RBP9.95□□□□□ -0.82
NEK1-207ENST00000511633 CLUL1Q15846 466 aa9.95□□□□□ -0.82
NEK1-207ENST00000511633 CCDC89Q8N998 374 aa9.95□□□□□ -0.82
NEK1-207ENST00000511633 PCDHA5Q9Y5H7 936 aa9.95□□□□□ -0.82
NEK1-207ENST00000511633 TNS3Q68CZ2 1445 aa9.95□□□□□ -0.82
NEK1-207ENST00000511633 N4BP1O75113 896 aaKnown RBP9.95□□□□□ -0.82
NEK1-207ENST00000511633 CRCPO75575 148 aa9.95□□□□□ -0.82
NEK1-207ENST00000511633 CDC25AP30304 524 aa9.95□□□□□ -0.82
NEK1-207ENST00000511633 TRAPPC10P48553 1259 aa9.95□□□□□ -0.82
NEK1-207ENST00000511633 RTKN2Q8IZC4 609 aa9.95□□□□□ -0.82
NEK1-207ENST00000511633 A0A1W2PQ27 194 aa9.95□□□□□ -0.82
NEK1-207ENST00000511633 A0A1W2PQ64 194 aa9.95□□□□□ -0.82
NEK1-207ENST00000511633 A0A1W2PQD8 194 aa9.95□□□□□ -0.82
NEK1-207ENST00000511633 LPXNO60711 386 aa9.95□□□□□ -0.82
NEK1-207ENST00000511633 IGSF3O75054 1194 aa9.95□□□□□ -0.82
NEK1-207ENST00000511633 ABL1P00519 1130 aa9.95□□□□□ -0.82
NEK1-207ENST00000511633 PIK3CAP42336 1068 aa9.95□□□□□ -0.82
NEK1-207ENST00000511633 CCNA1P78396 465 aa9.95□□□□□ -0.82
NEK1-207ENST00000511633 SETDB1Q15047 1291 aa9.95□□□□□ -0.82
NEK1-207ENST00000511633 BSPRYQ5W0U4 402 aa9.95□□□□□ -0.82
NEK1-207ENST00000511633 EEPD1Q7L9B9 569 aa9.95□□□□□ -0.82
NEK1-207ENST00000511633 CNOT6LQ96LI5 555 aaKnown RBP9.95□□□□□ -0.82
NEK1-207ENST00000511633 HNRNPDLO14979 420 aaKnown RBP9.95□□□□□ -0.82
NEK1-207ENST00000511633 STAM2O75886 525 aa9.95□□□□□ -0.82
NEK1-207ENST00000511633 CYP2D6P10635 497 aa9.95□□□□□ -0.82
NEK1-207ENST00000511633 AIFM3Q96NN9 605 aa9.95□□□□□ -0.82
NEK1-207ENST00000511633 NARFQ9UHQ1 456 aa9.95□□□□□ -0.82
NEK1-207ENST00000511633 RNF17Q9BXT8 1623 aaKnown RBP9.95□□□□□ -0.82
NEK1-207ENST00000511633 A0A087WWV3 80 aa9.94□□□□□ -0.82
NEK1-207ENST00000511633 CDC37Q16543 378 aaPredicted RBP9.94□□□□□ -0.82
NEK1-207ENST00000511633 NSMCE1Q8WV22 266 aa9.94□□□□□ -0.82
NEK1-207ENST00000511633 RRAGDQ9NQL2 400 aaPredicted RBP9.94□□□□□ -0.82
NEK1-207ENST00000511633 POLR3EQ9NVU0 708 aa9.94□□□□□ -0.82
NEK1-207ENST00000511633 STIM2Q9P246 746 aa9.94□□□□□ -0.82
NEK1-207ENST00000511633 AKT3Q9Y243 479 aa9.94□□□□□ -0.82
NEK1-207ENST00000511633 SPHKAPQ2M3C7 1700 aa9.94□□□□□ -0.82
NEK1-207ENST00000511633 KCNK3O14649 394 aa9.94□□□□□ -0.82
NEK1-207ENST00000511633 HOXA13P31271 388 aaPredicted RBP9.94□□□□□ -0.82
NEK1-207ENST00000511633 MNAT1P51948 309 aa9.94□□□□□ -0.82
NEK1-207ENST00000511633 Q3C1V9 767 aa9.94□□□□□ -0.82
NEK1-207ENST00000511633 AFAP1L1Q8TED9 768 aa9.94□□□□□ -0.82
NEK1-207ENST00000511633 ATP6V0A1Q93050 837 aa9.94□□□□□ -0.82
NEK1-207ENST00000511633 CCDC94Q9BW85 323 aaPredicted RBP9.94□□□□□ -0.82
NEK1-207ENST00000511633 MINPP1Q9UNW1 487 aa9.94□□□□□ -0.82
NEK1-207ENST00000511633 ATF7P17544 494 aaPredicted RBP9.94□□□□□ -0.82
NEK1-207ENST00000511633 CCND2P30279 289 aa9.94□□□□□ -0.82
NEK1-207ENST00000511633 KRT81Q14533 505 aa9.94□□□□□ -0.82
NEK1-207ENST00000511633 ARMC9Q7Z3E5 817 aa9.94□□□□□ -0.82
NEK1-207ENST00000511633 GDAP1L1Q96MZ0 367 aa9.94□□□□□ -0.82
NEK1-207ENST00000511633 METTL14Q9HCE5 456 aaKnown RBP9.94□□□□□ -0.82
NEK1-207ENST00000511633 SAR1BQ9Y6B6 198 aa9.94□□□□□ -0.82
NEK1-207ENST00000511633 PRPF3O43395 683 aaKnown RBP9.94□□□□□ -0.82
NEK1-207ENST00000511633 CYP19A1P11511 503 aaPredicted RBP9.94□□□□□ -0.82
NEK1-207ENST00000511633 PRDX5P30044 214 aa9.94□□□□□ -0.82
NEK1-207ENST00000511633 MYL7Q01449 175 aa9.94□□□□□ -0.82
NEK1-207ENST00000511633 PTPN21Q16825 1174 aa9.94□□□□□ -0.82
NEK1-207ENST00000511633 MICALL1Q8N3F8 863 aa9.94□□□□□ -0.82
NEK1-207ENST00000511633 STRBPQ96SI9 672 aaKnown RBP9.94□□□□□ -0.82
NEK1-207ENST00000511633 KCNQ2O43526 872 aa9.93□□□□□ -0.82
NEK1-207ENST00000511633 PLEKHA8P1O95397 391 aa9.93□□□□□ -0.82
NEK1-207ENST00000511633 COPB1P53618 953 aaKnown RBP9.93□□□□□ -0.82
NEK1-207ENST00000511633 MIS18BP1Q6P0N0 1132 aa9.93□□□□□ -0.82
NEK1-207ENST00000511633 SMC1BQ8NDV3 1235 aa9.93□□□□□ -0.82
NEK1-207ENST00000511633 CCT6BQ92526 530 aa9.93□□□□□ -0.82
NEK1-207ENST00000511633 CELF1Q92879 486 aaKnown RBP9.93□□□□□ -0.82
NEK1-207ENST00000511633 TIGD1Q96MW7 591 aa9.93□□□□□ -0.82
NEK1-207ENST00000511633 FAM193BQ96PV7 902 aaPredicted RBP9.93□□□□□ -0.82
NEK1-207ENST00000511633 MAGEF1Q9HAY2 307 aa9.93□□□□□ -0.82
NEK1-207ENST00000511633 RAB20Q9NX57 234 aa9.93□□□□□ -0.82
NEK1-207ENST00000511633 PPP2R2CQ9Y2T4 447 aa9.93□□□□□ -0.82
NEK1-207ENST00000511633 CAPN9O14815 690 aa9.93□□□□□ -0.82
NEK1-207ENST00000511633 TBC1D8O95759 1140 aa9.93□□□□□ -0.82
NEK1-207ENST00000511633 CYP2E1P05181 493 aaPredicted RBP9.93□□□□□ -0.82
NEK1-207ENST00000511633 PAK2Q13177 524 aa9.93□□□□□ -0.82
NEK1-207ENST00000511633 TFDP1Q14186 410 aa9.93□□□□□ -0.82
NEK1-207ENST00000511633 ARHGEF1Q92888 912 aaKnown RBP9.93□□□□□ -0.82
NEK1-207ENST00000511633 OGFRQ9NZT2 677 aa9.93□□□□□ -0.82
NEK1-207ENST00000511633 IFNAR1P17181 557 aa9.93□□□□□ -0.82
NEK1-207ENST00000511633 NR2F2P24468 414 aa9.93□□□□□ -0.82
NEK1-207ENST00000511633 PPP2R5CQ13362 524 aa9.93□□□□□ -0.82
NEK1-207ENST00000511633 EXOC3L4Q17RC7 722 aa9.93□□□□□ -0.82
NEK1-207ENST00000511633 SLC7A3Q8WY07 619 aa9.93□□□□□ -0.82
NEK1-207ENST00000511633 ZNF341Q9BYN7 854 aa9.93□□□□□ -0.82
NEK1-207ENST00000511633 RABEP2Q9H5N1 569 aa9.93□□□□□ -0.82
NEK1-207ENST00000511633 CRKP46108 304 aa9.93□□□□□ -0.82
NEK1-207ENST00000511633 NECTIN1Q15223 517 aa9.93□□□□□ -0.82
NEK1-207ENST00000511633 INTS8Q75QN2 995 aaKnown RBP9.93□□□□□ -0.82
NEK1-207ENST00000511633 SND1Q7KZF4 910 aaKnown RBP eCLIP9.93□□□□□ -0.82
NEK1-207ENST00000511633 ADAT2Q7Z6V5 191 aaKnown RBP9.93□□□□□ -0.82
NEK1-207ENST00000511633 TRIM58Q8NG06 486 aa9.93□□□□□ -0.82
NEK1-207ENST00000511633 AK8Q96MA6 479 aa9.93□□□□□ -0.82
NEK1-207ENST00000511633 GSDMAQ96QA5 445 aa9.93□□□□□ -0.82
NEK1-207ENST00000511633 TUBGCP2Q9BSJ2 902 aa9.93□□□□□ -0.82
NEK1-207ENST00000511633 VPS37BQ9H9H4 285 aa9.93□□□□□ -0.82
NEK1-207ENST00000511633 ADD3Q9UEY8 706 aaKnown RBP9.93□□□□□ -0.82
NEK1-207ENST00000511633 PCDHB6Q9Y5E3 794 aa9.93□□□□□ -0.82
NEK1-207ENST00000511633 ABCC12Q96J65 1359 aa9.93□□□□□ -0.82
NEK1-207ENST00000511633 GOLGA6CA6NDK9 693 aa9.93□□□□□ -0.82
NEK1-207ENST00000511633 GOLGA6BA6NDN3 693 aa9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms