RNA–Protein interactions for RNA: ENST00000511459.1

APBB3-217, Transcript of amyloid beta precursor protein binding family B member 3, human

TSL 4

Gene APBB3, Length 547 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
APBB3-217	ENST00000511459	TRAK2	O60296	914 aa		13.47	□□□□□ -0.25
APBB3-217	ENST00000511459	PRPF40A	O75400	957 aa	Known RBP	13.47	□□□□□ -0.25
APBB3-217	ENST00000511459	CFB	P00751	764 aa		13.47	□□□□□ -0.25
APBB3-217	ENST00000511459	POLR2M	P0CAP2	368 aa		13.47	□□□□□ -0.25
APBB3-217	ENST00000511459	GHRHR	Q02643	423 aa		13.47	□□□□□ -0.25
APBB3-217	ENST00000511459	SREBF2	Q12772	1141 aa		13.47	□□□□□ -0.25
APBB3-217	ENST00000511459		Q3C1V9	767 aa		13.47	□□□□□ -0.25
APBB3-217	ENST00000511459	KRT25	Q7Z3Z0	450 aa		13.47	□□□□□ -0.25
APBB3-217	ENST00000511459	MCF2L2	Q86YR7	1114 aa		13.47	□□□□□ -0.25
APBB3-217	ENST00000511459	IFNL1	Q8IU54	200 aa		13.47	□□□□□ -0.25
APBB3-217	ENST00000511459	RIOX2	Q8IUF8	465 aa		13.47	□□□□□ -0.25
APBB3-217	ENST00000511459	SMCR8	Q8TEV9	937 aa	Predicted RBP	13.47	□□□□□ -0.25
APBB3-217	ENST00000511459	CAPNS2	Q96L46	248 aa		13.47	□□□□□ -0.25
APBB3-217	ENST00000511459	PARK7	Q99497	189 aa	Known RBP	13.47	□□□□□ -0.25
APBB3-217	ENST00000511459	TFIP11	Q9UBB9	837 aa	Known RBP	13.47	□□□□□ -0.25
APBB3-217	ENST00000511459	CNPY2	Q9Y2B0	182 aa		13.47	□□□□□ -0.25
APBB3-217	ENST00000511459	DDX49	Q9Y6V7	483 aa	Known RBP	13.47	□□□□□ -0.25
APBB3-217	ENST00000511459	GOLGA6L4	A6NEF3	574 aa		13.46	□□□□□ -0.25
APBB3-217	ENST00000511459	FIBP	O43427	364 aa		13.46	□□□□□ -0.25
APBB3-217	ENST00000511459	HOXA13	P31271	388 aa	Predicted RBP	13.46	□□□□□ -0.25
APBB3-217	ENST00000511459	GCLC	P48506	637 aa	Predicted RBP	13.46	□□□□□ -0.25
APBB3-217	ENST00000511459	HSD17B4	P51659	736 aa		13.46	□□□□□ -0.25
APBB3-217	ENST00000511459	NOG	Q13253	232 aa		13.46	□□□□□ -0.25
APBB3-217	ENST00000511459	NONO	Q15233	471 aa	Known RBP eCLIP	13.46	□□□□□ -0.25
APBB3-217	ENST00000511459	RILPL1	Q5EBL4	403 aa		13.46	□□□□□ -0.25
APBB3-217	ENST00000511459	MCTP2	Q6DN12	878 aa		13.46	□□□□□ -0.25
APBB3-217	ENST00000511459	SAMD3	Q8N6K7	520 aa		13.46	□□□□□ -0.25
APBB3-217	ENST00000511459	CHST13	Q8NET6	341 aa		13.46	□□□□□ -0.25
APBB3-217	ENST00000511459	PGBD1	Q96JS3	809 aa		13.46	□□□□□ -0.25
APBB3-217	ENST00000511459	USP28	Q96RU2	1077 aa		13.46	□□□□□ -0.25
APBB3-217	ENST00000511459	MOV10L1	Q9BXT6	1211 aa	Known RBP	13.46	□□□□□ -0.25
APBB3-217	ENST00000511459	AOC2	O75106	756 aa		13.45	□□□□□ -0.26
APBB3-217	ENST00000511459	SLC25A27	O95847	323 aa		13.45	□□□□□ -0.26
APBB3-217	ENST00000511459	FOS	P01100	380 aa	Predicted RBP	13.45	□□□□□ -0.26
APBB3-217	ENST00000511459	TRAPPC10	P48553	1259 aa		13.45	□□□□□ -0.26
APBB3-217	ENST00000511459	ERVK-9	P63128	1117 aa		13.45	□□□□□ -0.26
APBB3-217	ENST00000511459	ERVK-24	P63145	666 aa		13.45	□□□□□ -0.26
APBB3-217	ENST00000511459	AP3B2	Q13367	1082 aa		13.45	□□□□□ -0.26
APBB3-217	ENST00000511459	INF2	Q27J81	1249 aa		13.45	□□□□□ -0.26
APBB3-217	ENST00000511459	TMEM87A	Q8NBN3	555 aa		13.45	□□□□□ -0.26
APBB3-217	ENST00000511459	GPRC5A	Q8NFJ5	357 aa		13.45	□□□□□ -0.26
APBB3-217	ENST00000511459	SYAP1	Q96A49	352 aa	Predicted RBP	13.45	□□□□□ -0.26
APBB3-217	ENST00000511459	SPATA32	Q96LK8	384 aa		13.45	□□□□□ -0.26
APBB3-217	ENST00000511459	FTO	Q9C0B1	505 aa	Known RBP eCLIP	13.45	□□□□□ -0.26
APBB3-217	ENST00000511459	MAF1	Q9H063	256 aa		13.45	□□□□□ -0.26
APBB3-217	ENST00000511459	ACAD9	Q9H845	621 aa		13.45	□□□□□ -0.26
APBB3-217	ENST00000511459	MAP3K20	Q9NYL2	800 aa	Known RBP	13.45	□□□□□ -0.26
APBB3-217	ENST00000511459	MORF4L1	Q9UBU8	362 aa		13.45	□□□□□ -0.26
APBB3-217	ENST00000511459	NOL7	Q9UMY1	257 aa	Known RBP	13.45	□□□□□ -0.26
APBB3-217	ENST00000511459	CLIC4	Q9Y696	253 aa		13.45	□□□□□ -0.26
APBB3-217	ENST00000511459	ADGRA2	Q96PE1	1338 aa		13.44	□□□□□ -0.26
APBB3-217	ENST00000511459	SPDYE3	A6NKU9	549 aa		13.44	□□□□□ -0.26
APBB3-217	ENST00000511459	WNT7A	O00755	349 aa		13.44	□□□□□ -0.26
APBB3-217	ENST00000511459	EDIL3	O43854	480 aa		13.44	□□□□□ -0.26
APBB3-217	ENST00000511459	ERCC3	P19447	782 aa		13.44	□□□□□ -0.26
APBB3-217	ENST00000511459	ATP2B1	P20020	1258 aa		13.44	□□□□□ -0.26
APBB3-217	ENST00000511459	RPS6	P62753	249 aa	Known RBP	13.44	□□□□□ -0.26
APBB3-217	ENST00000511459	CEBPZ	Q03701	1054 aa	Known RBP	13.44	□□□□□ -0.26
APBB3-217	ENST00000511459	TAF1C	Q15572	869 aa	Predicted RBP	13.44	□□□□□ -0.26
APBB3-217	ENST00000511459	ANO1	Q5XXA6	986 aa		13.44	□□□□□ -0.26
APBB3-217	ENST00000511459	NSMF	Q6X4W1	530 aa		13.44	□□□□□ -0.26
APBB3-217	ENST00000511459	RNF207	Q6ZRF8	634 aa		13.44	□□□□□ -0.26
APBB3-217	ENST00000511459	FCHSD1	Q86WN1	690 aa		13.44	□□□□□ -0.26
APBB3-217	ENST00000511459	NCAPG2	Q86XI2	1143 aa		13.44	□□□□□ -0.26
APBB3-217	ENST00000511459	ANKRD13C	Q8N6S4	541 aa		13.44	□□□□□ -0.26
APBB3-217	ENST00000511459	SYTL5	Q8TDW5	730 aa	Predicted RBP	13.44	□□□□□ -0.26
APBB3-217	ENST00000511459	TBCK	Q8TEA7	893 aa		13.44	□□□□□ -0.26
APBB3-217	ENST00000511459	ANO3	Q9BYT9	981 aa		13.44	□□□□□ -0.26
APBB3-217	ENST00000511459	R3HDML	Q9H3Y0	253 aa		13.44	□□□□□ -0.26
APBB3-217	ENST00000511459	LMBRD1	Q9NUN5	540 aa		13.44	□□□□□ -0.26
APBB3-217	ENST00000511459	RTEL1	Q9NZ71	1219 aa		13.44	□□□□□ -0.26
APBB3-217	ENST00000511459	COL20A1	Q9P218	1284 aa		13.44	□□□□□ -0.26
APBB3-217	ENST00000511459	FBXO40	Q9UH90	709 aa		13.44	□□□□□ -0.26
APBB3-217	ENST00000511459	RCOR1	Q9UKL0	485 aa		13.44	□□□□□ -0.26
APBB3-217	ENST00000511459	PCDHB6	Q9Y5E3	794 aa		13.44	□□□□□ -0.26
APBB3-217	ENST00000511459	COPB2	P35606	906 aa		13.43	□□□□□ -0.26
APBB3-217	ENST00000511459	NASP	P49321	788 aa	Predicted RBP	13.43	□□□□□ -0.26
APBB3-217	ENST00000511459	HTRA3	P83110	453 aa		13.43	□□□□□ -0.26
APBB3-217	ENST00000511459	BAAT	Q14032	418 aa	Predicted RBP	13.43	□□□□□ -0.26
APBB3-217	ENST00000511459	SF3A1	Q15459	793 aa	Known RBP	13.43	□□□□□ -0.26
APBB3-217	ENST00000511459	KLHL40	Q2TBA0	621 aa		13.43	□□□□□ -0.26
APBB3-217	ENST00000511459	TTC38	Q5R3I4	469 aa		13.43	□□□□□ -0.26
APBB3-217	ENST00000511459	SLC30A10	Q6XR72	485 aa		13.43	□□□□□ -0.26
APBB3-217	ENST00000511459	NEK8	Q86SG6	692 aa		13.43	□□□□□ -0.26
APBB3-217	ENST00000511459	REM2	Q8IYK8	340 aa	Predicted RBP	13.43	□□□□□ -0.26
APBB3-217	ENST00000511459	SHCBP1	Q8NEM2	672 aa		13.43	□□□□□ -0.26
APBB3-217	ENST00000511459	LEO1	Q8WVC0	666 aa	Predicted RBP	13.43	□□□□□ -0.26
APBB3-217	ENST00000511459	CRYGN	Q8WXF5	182 aa		13.43	□□□□□ -0.26
APBB3-217	ENST00000511459	MROH8	Q9H579	483 aa		13.43	□□□□□ -0.26
APBB3-217	ENST00000511459	GDPD2	Q9HCC8	539 aa		13.43	□□□□□ -0.26
APBB3-217	ENST00000511459	A1CF	Q9NQ94	594 aa	Known RBP	13.43	□□□□□ -0.26
APBB3-217	ENST00000511459	EIF4ENIF1	Q9NRA8	985 aa	Known RBP	13.43	□□□□□ -0.26
APBB3-217	ENST00000511459	POLR3E	Q9NVU0	708 aa		13.43	□□□□□ -0.26
APBB3-217	ENST00000511459	CPA4	Q9UI42	421 aa		13.43	□□□□□ -0.26
APBB3-217	ENST00000511459	ELP1	O95163	1332 aa		13.42	□□□□□ -0.26
APBB3-217	ENST00000511459	BCR	P11274	1271 aa		13.42	□□□□□ -0.26
APBB3-217	ENST00000511459	VEGFB	P49765	207 aa		13.42	□□□□□ -0.26
APBB3-217	ENST00000511459	UBE2H	P62256	183 aa		13.42	□□□□□ -0.26
APBB3-217	ENST00000511459	CCNA1	P78396	465 aa		13.42	□□□□□ -0.26
APBB3-217	ENST00000511459	PTPA	Q15257	358 aa		13.42	□□□□□ -0.26

Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms