RNA–Protein interactions for RNA: ENST00000511214.1

SNF8-210, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 2

Gene SNF8, Length 429 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-210ENST00000511214 HDAC6Q9UBN7 1215 aa10.13□□□□□ -0.79
SNF8-210ENST00000511214 ABCF2Q9UG63 623 aa10.13□□□□□ -0.79
SNF8-210ENST00000511214 PCDHA6Q9UN73 950 aa10.13□□□□□ -0.79
SNF8-210ENST00000511214 ZNF652Q9Y2D9 606 aa10.13□□□□□ -0.79
SNF8-210ENST00000511214 PCDHA8Q9Y5H6 950 aa10.13□□□□□ -0.79
SNF8-210ENST00000511214 KIAA1551Q9HCM1 1747 aa10.13□□□□□ -0.79
SNF8-210ENST00000511214 ROBO3Q96MS0 1386 aa10.13□□□□□ -0.79
SNF8-210ENST00000511214 XIRP1Q702N8 1843 aaKnown RBP10.12□□□□□ -0.79
SNF8-210ENST00000511214 FLT1P17948 1338 aa10.12□□□□□ -0.79
SNF8-210ENST00000511214 SSU72P8A0A1W2PR75 194 aa10.12□□□□□ -0.79
SNF8-210ENST00000511214 hCG_1642624A0A1W2PR95 340 aa10.12□□□□□ -0.79
SNF8-210ENST00000511214 EBAG9O00559 213 aa10.12□□□□□ -0.79
SNF8-210ENST00000511214 ENC1O14682 589 aa10.12□□□□□ -0.79
SNF8-210ENST00000511214 PHACTR2O75167 634 aa10.12□□□□□ -0.79
SNF8-210ENST00000511214 PAFAH1B1P43034 410 aa10.12□□□□□ -0.79
SNF8-210ENST00000511214 MTIF2P46199 727 aaKnown RBP10.12□□□□□ -0.79
SNF8-210ENST00000511214 DYNLL1P63167 89 aaKnown RBP10.12□□□□□ -0.79
SNF8-210ENST00000511214 MIIPQ5JXC2 388 aa10.12□□□□□ -0.79
SNF8-210ENST00000511214 ICE2Q659A1 982 aa10.12□□□□□ -0.79
SNF8-210ENST00000511214 CENPPQ6IPU0 288 aa10.12□□□□□ -0.79
SNF8-210ENST00000511214 RCSD1Q6JBY9 416 aa10.12□□□□□ -0.79
SNF8-210ENST00000511214 INTS5Q6P9B9 1019 aaKnown RBP10.12□□□□□ -0.79
SNF8-210ENST00000511214 CLEC4GQ6UXB4 293 aa10.12□□□□□ -0.79
SNF8-210ENST00000511214 TADA2BQ86TJ2 420 aa10.12□□□□□ -0.79
SNF8-210ENST00000511214 CABP7Q86V35 215 aa10.12□□□□□ -0.79
SNF8-210ENST00000511214 EIF1ADQ8N9N8 165 aaKnown RBP10.12□□□□□ -0.79
SNF8-210ENST00000511214 RASSF8Q8NHQ8 419 aa10.12□□□□□ -0.79
SNF8-210ENST00000511214 SYN2Q92777 582 aaPredicted RBP10.12□□□□□ -0.79
SNF8-210ENST00000511214 NSUN4Q96CB9 384 aaKnown RBP10.12□□□□□ -0.79
SNF8-210ENST00000511214 NOC4LQ9BVI4 516 aaKnown RBP10.12□□□□□ -0.79
SNF8-210ENST00000511214 CDCA7Q9BWT1 371 aaPredicted RBP10.12□□□□□ -0.79
SNF8-210ENST00000511214 TRIM9Q9C026 710 aa10.12□□□□□ -0.79
SNF8-210ENST00000511214 DCP1AQ9NPI6 582 aaPredicted RBP10.12□□□□□ -0.79
SNF8-210ENST00000511214 LUC7LQ9NQ29 371 aaKnown RBP10.12□□□□□ -0.79
SNF8-210ENST00000511214 AGPAT5Q9NUQ2 364 aa10.12□□□□□ -0.79
SNF8-210ENST00000511214 STK17AQ9UEE5 414 aa10.12□□□□□ -0.79
SNF8-210ENST00000511214 PCDHA13Q9Y5I0 950 aa10.12□□□□□ -0.79
SNF8-210ENST00000511214 COL14A1Q05707 1796 aaKnown RBP10.11□□□□□ -0.79
SNF8-210ENST00000511214 FAM205AQ6ZU69 1335 aa10.11□□□□□ -0.79
SNF8-210ENST00000511214 SHTN1A0MZ66 631 aa10.11□□□□□ -0.79
SNF8-210ENST00000511214 GRID2IPA4D2P6 1211 aa10.11□□□□□ -0.79
SNF8-210ENST00000511214 RCCD1A6NED2 376 aa10.11□□□□□ -0.79
SNF8-210ENST00000511214 TSPY2A6NKD2 308 aa10.11□□□□□ -0.79
SNF8-210ENST00000511214 hCG_1984214I3L0E3 225 aa10.11□□□□□ -0.79
SNF8-210ENST00000511214 SNAP23O00161 211 aa10.11□□□□□ -0.79
SNF8-210ENST00000511214 PDE2AO00408 941 aaPredicted RBP10.11□□□□□ -0.79
SNF8-210ENST00000511214 EIF3HO15372 352 aaKnown RBP eCLIP10.11□□□□□ -0.79
SNF8-210ENST00000511214 ZEB2O60315 1214 aa10.11□□□□□ -0.79
SNF8-210ENST00000511214 SRGAP2O75044 1071 aa10.11□□□□□ -0.79
SNF8-210ENST00000511214 COBLO75128 1261 aa10.11□□□□□ -0.79
SNF8-210ENST00000511214 OR52Z1P0C646 297 aa10.11□□□□□ -0.79
SNF8-210ENST00000511214 IRAK1P51617 712 aa10.11□□□□□ -0.79
SNF8-210ENST00000511214 LRRC63Q05C16 580 aa10.11□□□□□ -0.79
SNF8-210ENST00000511214 PDE4DQ08499 809 aa10.11□□□□□ -0.79
SNF8-210ENST00000511214 PSMD2Q13200 908 aa10.11□□□□□ -0.79
SNF8-210ENST00000511214 MAN2A1Q16706 1144 aa10.11□□□□□ -0.79
SNF8-210ENST00000511214 VWA3BQ502W6 1294 aa10.11□□□□□ -0.79
SNF8-210ENST00000511214 SPTY2D1Q68D10 685 aaPredicted RBP10.11□□□□□ -0.79
SNF8-210ENST00000511214 ANKRD40Q6AI12 368 aa10.11□□□□□ -0.79
SNF8-210ENST00000511214 FOXR1Q6PIV2 292 aa10.11□□□□□ -0.79
SNF8-210ENST00000511214 CERS3Q8IU89 383 aa10.11□□□□□ -0.79
SNF8-210ENST00000511214 CD302Q8IX05 232 aa10.11□□□□□ -0.79
SNF8-210ENST00000511214 MREGQ8N565 214 aa10.11□□□□□ -0.79
SNF8-210ENST00000511214 ZNF713Q8N859 430 aaPredicted RBP10.11□□□□□ -0.79
SNF8-210ENST00000511214 SPATA4Q8NEY3 305 aa10.11□□□□□ -0.79
SNF8-210ENST00000511214 CAPZA3Q96KX2 299 aa10.11□□□□□ -0.79
SNF8-210ENST00000511214 PAGR1Q9BTK6 254 aa10.11□□□□□ -0.79
SNF8-210ENST00000511214 CAPS2Q9BXY5 557 aa10.11□□□□□ -0.79
SNF8-210ENST00000511214 IFIH1Q9BYX4 1025 aaKnown RBP10.11□□□□□ -0.79
SNF8-210ENST00000511214 JADE2Q9NQC1 790 aa10.11□□□□□ -0.79
SNF8-210ENST00000511214 BARHL2Q9NY43 387 aa10.11□□□□□ -0.79
SNF8-210ENST00000511214 STIM2Q9P246 746 aa10.11□□□□□ -0.79
SNF8-210ENST00000511214 MAPK8IP1Q9UQF2 711 aa10.11□□□□□ -0.79
SNF8-210ENST00000511214 SIK3Q9Y2K2 1263 aa10.11□□□□□ -0.79
SNF8-210ENST00000511214 CASZ1Q86V15 1759 aa10.11□□□□□ -0.79
SNF8-210ENST00000511214 CYP2D7A0A087X1C5 515 aa10.1□□□□□ -0.79
SNF8-210ENST00000511214 ESYT2A0FGR8 921 aa10.1□□□□□ -0.79
SNF8-210ENST00000511214 RBAK-RBAKDNI3L0D1 243 aa10.1□□□□□ -0.79
SNF8-210ENST00000511214 STXBP3O00186 592 aa10.1□□□□□ -0.79
SNF8-210ENST00000511214 EXOC5O00471 708 aa10.1□□□□□ -0.79
SNF8-210ENST00000511214 PES1O00541 588 aaKnown RBP10.1□□□□□ -0.79
SNF8-210ENST00000511214 SLC26A4O43511 780 aa10.1□□□□□ -0.79
SNF8-210ENST00000511214 HSF2BPO75031 334 aa10.1□□□□□ -0.79
SNF8-210ENST00000511214 PLCG1P19174 1290 aa10.1□□□□□ -0.79
SNF8-210ENST00000511214 GNA11P29992 359 aa10.1□□□□□ -0.79
SNF8-210ENST00000511214 USP8P40818 1118 aa10.1□□□□□ -0.79
SNF8-210ENST00000511214 KIF11P52732 1056 aa10.1□□□□□ -0.79
SNF8-210ENST00000511214 SEPT2Q15019 361 aa10.1□□□□□ -0.79
SNF8-210ENST00000511214 NONOQ15233 471 aaKnown RBP eCLIP10.1□□□□□ -0.79
SNF8-210ENST00000511214 CCDC96Q2M329 555 aa10.1□□□□□ -0.79
SNF8-210ENST00000511214 SLC10A5Q5PT55 438 aa10.1□□□□□ -0.79
SNF8-210ENST00000511214 UNC13DQ70J99 1090 aa10.1□□□□□ -0.79
SNF8-210ENST00000511214 B4GALNT4Q76KP1 1039 aa10.1□□□□□ -0.79
SNF8-210ENST00000511214 SND1Q7KZF4 910 aaKnown RBP eCLIP10.1□□□□□ -0.79
SNF8-210ENST00000511214 IFT20Q8IY31 132 aa10.1□□□□□ -0.79
SNF8-210ENST00000511214 GUF1Q8N442 669 aaKnown RBP10.1□□□□□ -0.79
SNF8-210ENST00000511214 PNMA1Q8ND90 353 aa10.1□□□□□ -0.79
SNF8-210ENST00000511214 CALML4Q96GE6 196 aa10.1□□□□□ -0.79
SNF8-210ENST00000511214 FAM84BQ96KN1 310 aaPredicted RBP10.1□□□□□ -0.79
SNF8-210ENST00000511214 PCMTD1Q96MG8 357 aaPredicted RBP10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms