RNA–Protein interactions for RNA: ENST00000511153.5

PROM1-211, Transcript of prominin 1, humanhuman

TSL 1 (best)

Gene PROM1, Length 1,595 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-211ENST00000511153 FEM1BQ9UK73 627 aa6.27□□□□□ -1.41
PROM1-211ENST00000511153 PPP1R9AQ9ULJ8 1098 aa6.27□□□□□ -1.41
PROM1-211ENST00000511153 LIMCH1Q9UPQ0 1083 aa6.27□□□□□ -1.41
PROM1-211ENST00000511153 RIPK3Q9Y572 518 aa6.27□□□□□ -1.41
PROM1-211ENST00000511153 V9GY48 417 aaPredicted RBP6.27□□□□□ -1.41
PROM1-211ENST00000511153 WDR19Q8NEZ3 1342 aa6.27□□□□□ -1.41
PROM1-211ENST00000511153 VWA5AO00534 786 aa6.27□□□□□ -1.41
PROM1-211ENST00000511153 CPLX1O14810 134 aa6.27□□□□□ -1.41
PROM1-211ENST00000511153 FOXN1O15353 648 aa6.27□□□□□ -1.41
PROM1-211ENST00000511153 ZBED4O75132 1171 aa6.27□□□□□ -1.41
PROM1-211ENST00000511153 CTDNEP1O95476 244 aa6.27□□□□□ -1.41
PROM1-211ENST00000511153 CTGFP29279 349 aa6.27□□□□□ -1.41
PROM1-211ENST00000511153 MAP2K2P36507 400 aa6.27□□□□□ -1.41
PROM1-211ENST00000511153 TM4SF4P48230 202 aa6.27□□□□□ -1.41
PROM1-211ENST00000511153 QRICH1Q2TAL8 776 aa6.27□□□□□ -1.41
PROM1-211ENST00000511153 ASPRV1Q53RT3 343 aa6.27□□□□□ -1.41
PROM1-211ENST00000511153 MUM1L1Q5H9M0 696 aa6.27□□□□□ -1.41
PROM1-211ENST00000511153 FOXD4L5Q5VV16 416 aaPredicted RBP6.27□□□□□ -1.41
PROM1-211ENST00000511153 SNRNP48Q6IEG0 339 aaKnown RBP6.27□□□□□ -1.41
PROM1-211ENST00000511153 TMTC3Q6ZXV5 915 aa6.27□□□□□ -1.41
PROM1-211ENST00000511153 LAPTM4BQ86VI4 370 aa6.27□□□□□ -1.41
PROM1-211ENST00000511153 SGMS1Q86VZ5 419 aa6.27□□□□□ -1.41
PROM1-211ENST00000511153 CD99L2Q8TCZ2 262 aa6.27□□□□□ -1.41
PROM1-211ENST00000511153 FOXD4L4Q8WXT5 416 aaPredicted RBP6.27□□□□□ -1.41
PROM1-211ENST00000511153 TBC1D5Q92609 795 aa6.27□□□□□ -1.41
PROM1-211ENST00000511153 TMX3Q96JJ7 454 aa6.27□□□□□ -1.41
PROM1-211ENST00000511153 POLR3EQ9NVU0 708 aa6.27□□□□□ -1.41
PROM1-211ENST00000511153 CCPG1Q9ULG6 757 aa6.27□□□□□ -1.41
PROM1-211ENST00000511153 CNTNAP5Q8WYK1 1306 aa6.26□□□□□ -1.41
PROM1-211ENST00000511153 PTPDC1A2A3K4 754 aa6.26□□□□□ -1.41
PROM1-211ENST00000511153 UNCXA6NJT0 531 aa6.26□□□□□ -1.41
PROM1-211ENST00000511153 CA12O43570 354 aa6.26□□□□□ -1.41
PROM1-211ENST00000511153 SNHG28P0DPA3 235 aa6.26□□□□□ -1.41
PROM1-211ENST00000511153 KIF5BP33176 963 aa6.26□□□□□ -1.41
PROM1-211ENST00000511153 LBX1P52954 281 aa6.26□□□□□ -1.41
PROM1-211ENST00000511153 PABPC4Q13310 644 aaKnown RBP eCLIP6.26□□□□□ -1.41
PROM1-211ENST00000511153 HSCBQ8IWL3 235 aa6.26□□□□□ -1.41
PROM1-211ENST00000511153 CCAR1Q8IX12 1150 aaKnown RBP6.26□□□□□ -1.41
PROM1-211ENST00000511153 TMTC2Q8N394 836 aa6.26□□□□□ -1.41
PROM1-211ENST00000511153 PRPF38AQ8NAV1 312 aaKnown RBP6.26□□□□□ -1.41
PROM1-211ENST00000511153 CHURC1Q8WUH1 139 aa6.26□□□□□ -1.41
PROM1-211ENST00000511153 PGBD1Q96JS3 809 aa6.26□□□□□ -1.41
PROM1-211ENST00000511153 UIMC1Q96RL1 719 aa6.26□□□□□ -1.41
PROM1-211ENST00000511153 MOV10L1Q9BXT6 1211 aaKnown RBP6.26□□□□□ -1.41
PROM1-211ENST00000511153 AGXT2Q9BYV1 514 aa6.26□□□□□ -1.41
PROM1-211ENST00000511153 KCNJ14Q9UNX9 436 aa6.26□□□□□ -1.41
PROM1-211ENST00000511153 CENPFP49454 3210 aa6.26□□□□□ -1.41
PROM1-211ENST00000511153 NFIBO00712 420 aa6.25□□□□□ -1.41
PROM1-211ENST00000511153 TLR2O60603 784 aa6.25□□□□□ -1.41
PROM1-211ENST00000511153 PFKFB2O60825 505 aa6.25□□□□□ -1.41
PROM1-211ENST00000511153 FMNL1O95466 1100 aaPredicted RBP6.25□□□□□ -1.41
PROM1-211ENST00000511153 PGK2P07205 417 aa6.25□□□□□ -1.41
PROM1-211ENST00000511153 CALM1P0DP23 149 aa6.25□□□□□ -1.41
PROM1-211ENST00000511153 CALM2P0DP24 149 aa6.25□□□□□ -1.41
PROM1-211ENST00000511153 CALM3P0DP25 149 aa6.25□□□□□ -1.41
PROM1-211ENST00000511153 ERCC3P19447 782 aa6.25□□□□□ -1.41
PROM1-211ENST00000511153 HOXA7P31268 230 aaPredicted RBP6.25□□□□□ -1.41
PROM1-211ENST00000511153 HOXA13P31271 388 aaPredicted RBP6.25□□□□□ -1.41
PROM1-211ENST00000511153 STAT3P40763 770 aa6.25□□□□□ -1.41
PROM1-211ENST00000511153 ERVK-9P63128 1117 aa6.25□□□□□ -1.41
PROM1-211ENST00000511153 ERVK-24P63145 666 aa6.25□□□□□ -1.41
PROM1-211ENST00000511153 UBXN2AP68543 259 aa6.25□□□□□ -1.41
PROM1-211ENST00000511153 AKAP17AQ02040 695 aaKnown RBP6.25□□□□□ -1.41
PROM1-211ENST00000511153 SSRP1Q08945 709 aaKnown RBP6.25□□□□□ -1.41
PROM1-211ENST00000511153 ANKRD1Q15327 319 aa6.25□□□□□ -1.41
PROM1-211ENST00000511153 UBE2SQ16763 222 aa6.25□□□□□ -1.41
PROM1-211ENST00000511153 WWC2Q6AWC2 1192 aa6.25□□□□□ -1.41
PROM1-211ENST00000511153 NSMFQ6X4W1 530 aa6.25□□□□□ -1.41
PROM1-211ENST00000511153 FAM160B2Q86V87 743 aa6.25□□□□□ -1.41
PROM1-211ENST00000511153 FBXO11Q86XK2 927 aa6.25□□□□□ -1.41
PROM1-211ENST00000511153 NSUN7Q8NE18 718 aaKnown RBP6.25□□□□□ -1.41
PROM1-211ENST00000511153 REPS2Q8NFH8 660 aa6.25□□□□□ -1.41
PROM1-211ENST00000511153 GPRC5AQ8NFJ5 357 aa6.25□□□□□ -1.41
PROM1-211ENST00000511153 RASGRP4Q8TDF6 673 aa6.25□□□□□ -1.41
PROM1-211ENST00000511153 ZNF296Q8WUU4 475 aaPredicted RBP6.25□□□□□ -1.41
PROM1-211ENST00000511153 SPIRE2Q8WWL2 714 aa6.25□□□□□ -1.41
PROM1-211ENST00000511153 HLA-CQ95604 372 aa6.25□□□□□ -1.41
PROM1-211ENST00000511153 GTF3C6Q969F1 213 aa6.25□□□□□ -1.41
PROM1-211ENST00000511153 SHISA4Q96DD7 197 aa6.25□□□□□ -1.41
PROM1-211ENST00000511153 RRP36Q96EU6 259 aaKnown RBP6.25□□□□□ -1.41
PROM1-211ENST00000511153 ZNF274Q96GC6 653 aaPredicted RBP6.25□□□□□ -1.41
PROM1-211ENST00000511153 SPATC1LQ9H0A9 340 aa6.25□□□□□ -1.41
PROM1-211ENST00000511153 SLC38A10Q9HBR0 1119 aa6.25□□□□□ -1.41
PROM1-211ENST00000511153 RNF146Q9NTX7 359 aa6.25□□□□□ -1.41
PROM1-211ENST00000511153 TMEM260Q9NX78 707 aa6.25□□□□□ -1.41
PROM1-211ENST00000511153 WBP1LQ9NX94 342 aa6.25□□□□□ -1.41
PROM1-211ENST00000511153 HOXC10Q9NYD6 342 aa6.25□□□□□ -1.41
PROM1-211ENST00000511153 VPS54Q9P1Q0 977 aa6.25□□□□□ -1.41
PROM1-211ENST00000511153 ORC3Q9UBD5 711 aaPredicted RBP6.25□□□□□ -1.41
PROM1-211ENST00000511153 ZNF536O15090 1300 aa6.25□□□□□ -1.41
PROM1-211ENST00000511153 GPR25O00155 361 aa6.24□□□□□ -1.41
PROM1-211ENST00000511153 SORBS3O60504 671 aa6.24□□□□□ -1.41
PROM1-211ENST00000511153 HSP90AA1P07900 732 aaKnown RBP6.24□□□□□ -1.41
PROM1-211ENST00000511153 HSPA8P11142 646 aaKnown RBP6.24□□□□□ -1.41
PROM1-211ENST00000511153 NDUFV2P19404 249 aa6.24□□□□□ -1.41
PROM1-211ENST00000511153 CYP2B6P20813 491 aa6.24□□□□□ -1.41
PROM1-211ENST00000511153 CALML3P27482 149 aa6.24□□□□□ -1.41
PROM1-211ENST00000511153 PSMC4P43686 418 aa6.24□□□□□ -1.41
PROM1-211ENST00000511153 INHBEP58166 350 aa6.24□□□□□ -1.41
PROM1-211ENST00000511153 MAP2K1Q02750 393 aaPredicted RBP6.24□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms