RNA–Protein interactions for RNA: ENST00000509994.2

SCARB2-204, Transcript of scavenger receptor class B member 2, humanhuman

TSL 4

Gene SCARB2, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-204ENST00000509994 GPHNQ9NQX3 736 aaPredicted RBP11.88□□□□□ -0.51
SCARB2-204ENST00000509994 CTNNA3Q9UI47 895 aa11.88□□□□□ -0.51
SCARB2-204ENST00000509994 SUPT16HQ9Y5B9 1047 aaKnown RBP11.88□□□□□ -0.51
SCARB2-204ENST00000509994 DLL1O00548 723 aa11.87□□□□□ -0.51
SCARB2-204ENST00000509994 CABYRO75952 493 aa11.87□□□□□ -0.51
SCARB2-204ENST00000509994 MYL3P08590 195 aa11.87□□□□□ -0.51
SCARB2-204ENST00000509994 EPHB4P54760 987 aa11.87□□□□□ -0.51
SCARB2-204ENST00000509994 IRX6P78412 446 aaPredicted RBP11.87□□□□□ -0.51
SCARB2-204ENST00000509994 SMAD3P84022 425 aaKnown RBP11.87□□□□□ -0.51
SCARB2-204ENST00000509994 ITGA7Q13683 1181 aa11.87□□□□□ -0.51
SCARB2-204ENST00000509994 BRDTQ58F21 947 aaPredicted RBP11.87□□□□□ -0.51
SCARB2-204ENST00000509994 GPATCH4Q5T3I0 446 aaKnown RBP11.87□□□□□ -0.51
SCARB2-204ENST00000509994 FAM109BQ6ICB4 259 aaPredicted RBP11.87□□□□□ -0.51
SCARB2-204ENST00000509994 OR6J1Q8NGC5 347 aa11.87□□□□□ -0.51
SCARB2-204ENST00000509994 WDR11Q9BZH6 1224 aa11.87□□□□□ -0.51
SCARB2-204ENST00000509994 KRT23Q9C075 422 aa11.87□□□□□ -0.51
SCARB2-204ENST00000509994 UBA5Q9GZZ9 404 aa11.87□□□□□ -0.51
SCARB2-204ENST00000509994 KATNBL1Q9H079 304 aa11.87□□□□□ -0.51
SCARB2-204ENST00000509994 CPVLQ9H3G5 476 aa11.87□□□□□ -0.51
SCARB2-204ENST00000509994 OSBPL3Q9H4L5 887 aa11.87□□□□□ -0.51
SCARB2-204ENST00000509994 ASTN1O14525 1302 aa11.86□□□□□ -0.51
SCARB2-204ENST00000509994 RAD50Q92878 1312 aa11.86□□□□□ -0.51
SCARB2-204ENST00000509994 NOVP48745 357 aa11.86□□□□□ -0.51
SCARB2-204ENST00000509994 CPT1AP50416 773 aa11.86□□□□□ -0.51
SCARB2-204ENST00000509994 PSMC6P62333 389 aa11.86□□□□□ -0.51
SCARB2-204ENST00000509994 PPP2R5BQ15173 497 aa11.86□□□□□ -0.51
SCARB2-204ENST00000509994 CDC37Q16543 378 aaPredicted RBP11.86□□□□□ -0.51
SCARB2-204ENST00000509994 FAM47CQ5HY64 1035 aa11.86□□□□□ -0.51
SCARB2-204ENST00000509994 MFSD5Q6N075 450 aa11.86□□□□□ -0.51
SCARB2-204ENST00000509994 FAM126BQ8IXS8 530 aa11.86□□□□□ -0.51
SCARB2-204ENST00000509994 GUCD1Q96NT3 240 aa11.86□□□□□ -0.51
SCARB2-204ENST00000509994 ZSCAN10Q96SZ4 725 aaPredicted RBP11.86□□□□□ -0.51
SCARB2-204ENST00000509994 HIPK3Q9H422 1215 aa11.86□□□□□ -0.51
SCARB2-204ENST00000509994 CNNM2Q9H8M5 875 aa11.86□□□□□ -0.51
SCARB2-204ENST00000509994 VAT1LQ9HCJ6 419 aa11.86□□□□□ -0.51
SCARB2-204ENST00000509994 TBX21Q9UL17 535 aa11.86□□□□□ -0.51
SCARB2-204ENST00000509994 GNEQ9Y223 722 aaKnown RBP11.86□□□□□ -0.51
SCARB2-204ENST00000509994 A0A0C4DFX4 3053 aa11.86□□□□□ -0.51
SCARB2-204ENST00000509994 TNKSO95271 1327 aa11.86□□□□□ -0.51
SCARB2-204ENST00000509994 PARP1P09874 1014 aaKnown RBP11.85□□□□□ -0.51
SCARB2-204ENST00000509994 ACRP10323 421 aa11.85□□□□□ -0.51
SCARB2-204ENST00000509994 FOSL2P15408 326 aa11.85□□□□□ -0.51
SCARB2-204ENST00000509994 CSF2RAP15509 400 aa11.85□□□□□ -0.51
SCARB2-204ENST00000509994 CYP2C18P33260 490 aa11.85□□□□□ -0.51
SCARB2-204ENST00000509994 CDK7P50613 346 aa11.85□□□□□ -0.51
SCARB2-204ENST00000509994 RPS6P62753 249 aaKnown RBP11.85□□□□□ -0.51
SCARB2-204ENST00000509994 TRDNQ13061 729 aa11.85□□□□□ -0.51
SCARB2-204ENST00000509994 IFIT1BQ5T764 474 aaKnown RBP11.85□□□□□ -0.51
SCARB2-204ENST00000509994 TAPT1Q6NXT6 567 aa11.85□□□□□ -0.51
SCARB2-204ENST00000509994 DGKHQ86XP1 1220 aa11.85□□□□□ -0.51
SCARB2-204ENST00000509994 MYLIPQ8WY64 445 aa11.85□□□□□ -0.51
SCARB2-204ENST00000509994 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.85□□□□□ -0.51
SCARB2-204ENST00000509994 DSCC1Q9BVC3 393 aa11.85□□□□□ -0.51
SCARB2-204ENST00000509994 MTIF3Q9H2K0 278 aaKnown RBP11.85□□□□□ -0.51
SCARB2-204ENST00000509994 SEMA6BQ9H3T3 888 aa11.85□□□□□ -0.51
SCARB2-204ENST00000509994 POLR3EQ9NVU0 708 aa11.85□□□□□ -0.51
SCARB2-204ENST00000509994 WDR19Q8NEZ3 1342 aa11.85□□□□□ -0.51
SCARB2-204ENST00000509994 HSFX4A0A1B0GTS1 333 aaPredicted RBP11.84□□□□□ -0.51
SCARB2-204ENST00000509994 HSFX3A0A1B0GWH4 333 aaPredicted RBP11.84□□□□□ -0.51
SCARB2-204ENST00000509994 CTAGE5O15320 804 aa11.84□□□□□ -0.51
SCARB2-204ENST00000509994 DNAJB2P25686 324 aa11.84□□□□□ -0.51
SCARB2-204ENST00000509994 NT5C2P49902 561 aa11.84□□□□□ -0.51
SCARB2-204ENST00000509994 CCL23P55773 120 aa11.84□□□□□ -0.51
SCARB2-204ENST00000509994 DUSP28Q4G0W2 176 aa11.84□□□□□ -0.51
SCARB2-204ENST00000509994 ASPRV1Q53RT3 343 aa11.84□□□□□ -0.51
SCARB2-204ENST00000509994 TMEM63BQ5T3F8 832 aa11.84□□□□□ -0.51
SCARB2-204ENST00000509994 PSRC1Q6PGN9 363 aaPredicted RBP11.84□□□□□ -0.51
SCARB2-204ENST00000509994 ENAHQ8N8S7 591 aaPredicted RBP11.84□□□□□ -0.51
SCARB2-204ENST00000509994 MAFAQ8NHW3 353 aaPredicted RBP11.84□□□□□ -0.51
SCARB2-204ENST00000509994 SCFD2Q8WU76 684 aa11.84□□□□□ -0.51
SCARB2-204ENST00000509994 RUFY2Q8WXA3 655 aa11.84□□□□□ -0.51
SCARB2-204ENST00000509994 CLEC4DQ8WXI8 215 aa11.84□□□□□ -0.51
SCARB2-204ENST00000509994 CDX2Q99626 313 aaPredicted RBP11.84□□□□□ -0.51
SCARB2-204ENST00000509994 TRPV6Q9H1D0 765 aa11.84□□□□□ -0.51
SCARB2-204ENST00000509994 Q9Y3F1 56 aa11.84□□□□□ -0.51
SCARB2-204ENST00000509994 GBF1Q92538 1859 aa11.84□□□□□ -0.51
SCARB2-204ENST00000509994 KIAA1217Q5T5P2 1943 aa11.84□□□□□ -0.51
SCARB2-204ENST00000509994 ABCB11O95342 1321 aa11.84□□□□□ -0.51
SCARB2-204ENST00000509994 EYSQ5T1H1 3165 aa11.83□□□□□ -0.52
SCARB2-204ENST00000509994 LOC102724159A0A0B4J2E5 919 aa11.83□□□□□ -0.52
SCARB2-204ENST00000509994 ERICH2A1L162 156 aa11.83□□□□□ -0.52
SCARB2-204ENST00000509994 SNHG28P0DPA3 235 aa11.83□□□□□ -0.52
SCARB2-204ENST00000509994 TXNP10599 105 aaKnown RBP11.83□□□□□ -0.52
SCARB2-204ENST00000509994 PWP2Q15269 919 aaKnown RBP11.83□□□□□ -0.52
SCARB2-204ENST00000509994 TTC22Q5TAA0 569 aa11.83□□□□□ -0.52
SCARB2-204ENST00000509994 RALYLQ86SE5 291 aaKnown RBP11.83□□□□□ -0.52
SCARB2-204ENST00000509994 FBXO11Q86XK2 927 aa11.83□□□□□ -0.52
SCARB2-204ENST00000509994 MCF2L2Q86YR7 1114 aa11.83□□□□□ -0.52
SCARB2-204ENST00000509994 ADGRF4Q8IZF3 695 aa11.83□□□□□ -0.52
SCARB2-204ENST00000509994 DNERQ8NFT8 737 aa11.83□□□□□ -0.52
SCARB2-204ENST00000509994 ZSWIM5Q9P217 1185 aa11.83□□□□□ -0.52
SCARB2-204ENST00000509994 NOD1Q9Y239 953 aa11.83□□□□□ -0.52
SCARB2-204ENST00000509994 MYO9BQ13459 2157 aa11.83□□□□□ -0.52
SCARB2-204ENST00000509994 MYH7BA7E2Y1 1941 aa11.83□□□□□ -0.52
SCARB2-204ENST00000509994 UNC80Q8N2C7 3258 aa11.82□□□□□ -0.52
SCARB2-204ENST00000509994 ZBBXA8MT70 800 aa11.82□□□□□ -0.52
SCARB2-204ENST00000509994 NKRFO15226 690 aaKnown RBP eCLIP11.82□□□□□ -0.52
SCARB2-204ENST00000509994 B4GALT4O60513 344 aa11.82□□□□□ -0.52
SCARB2-204ENST00000509994 TTLL4Q14679 1199 aa11.82□□□□□ -0.52
SCARB2-204ENST00000509994 QRICH1Q2TAL8 776 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms