RNA–Protein interactions for RNA: ENST00000509601.1

TPM3-220, Transcript of tropomyosin 3, humanhuman

TSL 4

Gene TPM3, Length 543 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-220ENST00000509601 ANKRD33Q7Z3H0 272 aa20.96■□□□□ 0.95
TPM3-220ENST00000509601 SKAP1Q86WV1 359 aa20.96■□□□□ 0.95
TPM3-220ENST00000509601 BADQ92934 168 aa20.96■□□□□ 0.95
TPM3-220ENST00000509601 SENP2Q9HC62 589 aa20.96■□□□□ 0.95
TPM3-220ENST00000509601 VTA1Q9NP79 307 aa20.96■□□□□ 0.95
TPM3-220ENST00000509601 RBM47A0AV96 593 aaKnown RBP20.95■□□□□ 0.94
TPM3-220ENST00000509601 PQBP1O60828 265 aaKnown RBP20.95■□□□□ 0.94
TPM3-220ENST00000509601 CLTBP09497 229 aa20.95■□□□□ 0.94
TPM3-220ENST00000509601 FAAP100Q0VG06 881 aa20.95■□□□□ 0.94
TPM3-220ENST00000509601 QRICH1Q2TAL8 776 aa20.95■□□□□ 0.94
TPM3-220ENST00000509601 KIAA1211Q6ZU35 1233 aa20.95■□□□□ 0.94
TPM3-220ENST00000509601 NOL8Q76FK4 1167 aaKnown RBP20.95■□□□□ 0.94
TPM3-220ENST00000509601 GLT1D1Q96MS3 346 aa20.95■□□□□ 0.94
TPM3-220ENST00000509601 MAD2L2Q9UI95 211 aa20.95■□□□□ 0.94
TPM3-220ENST00000509601 Q9Y3F1 56 aa20.95■□□□□ 0.94
TPM3-220ENST00000509601 PALM3A6NDB9 673 aaPredicted RBP20.94■□□□□ 0.94
TPM3-220ENST00000509601 KIAA0355O15063 1070 aa20.94■□□□□ 0.94
TPM3-220ENST00000509601 EDNRBP24530 442 aa20.94■□□□□ 0.94
TPM3-220ENST00000509601 NCOA7Q8NI08 942 aa20.94■□□□□ 0.94
TPM3-220ENST00000509601 RBM8AQ9Y5S9 174 aaKnown RBP20.94■□□□□ 0.94
TPM3-220ENST00000509601 LAMA2P24043 3122 aaKnown RBP20.93■□□□□ 0.94
TPM3-220ENST00000509601 ARVCFO00192 962 aa20.93■□□□□ 0.94
TPM3-220ENST00000509601 IFIT3O14879 490 aaKnown RBP20.93■□□□□ 0.94
TPM3-220ENST00000509601 ANTXR2P58335 489 aa20.93■□□□□ 0.94
TPM3-220ENST00000509601 SLC35G1Q2M3R5 365 aa20.93■□□□□ 0.94
TPM3-220ENST00000509601 DUSP28Q4G0W2 176 aa20.93■□□□□ 0.94
TPM3-220ENST00000509601 CHST3Q7LGC8 479 aa20.93■□□□□ 0.94
TPM3-220ENST00000509601 TLK2Q86UE8 772 aa20.93■□□□□ 0.94
TPM3-220ENST00000509601 DNERQ8NFT8 737 aa20.93■□□□□ 0.94
TPM3-220ENST00000509601 MTMR8Q96EF0 704 aa20.93■□□□□ 0.94
TPM3-220ENST00000509601 MAF1Q9H063 256 aa20.93■□□□□ 0.94
TPM3-220ENST00000509601 LSG1Q9H089 658 aaKnown RBP20.93■□□□□ 0.94
TPM3-220ENST00000509601 AP5M1Q9H0R1 490 aa20.93■□□□□ 0.94
TPM3-220ENST00000509601 LTBP2Q14767 1821 aa20.92■□□□□ 0.94
TPM3-220ENST00000509601 KLRF2D3W0D1 207 aa20.92■□□□□ 0.94
TPM3-220ENST00000509601 FSCN1Q16658 493 aaKnown RBP20.92■□□□□ 0.94
TPM3-220ENST00000509601 FBXO11Q86XK2 927 aa20.92■□□□□ 0.94
TPM3-220ENST00000509601 MB21D2Q8IYB1 491 aaPredicted RBP20.92■□□□□ 0.94
TPM3-220ENST00000509601 SYTL5Q8TDW5 730 aaPredicted RBP20.92■□□□□ 0.94
TPM3-220ENST00000509601 IGDCC4Q8TDY8 1250 aa20.92■□□□□ 0.94
TPM3-220ENST00000509601 VTI1AQ96AJ9 217 aa20.92■□□□□ 0.94
TPM3-220ENST00000509601 TAAR1Q96RJ0 339 aa20.92■□□□□ 0.94
TPM3-220ENST00000509601 WDR11Q9BZH6 1224 aa20.92■□□□□ 0.94
TPM3-220ENST00000509601 TMEM39AQ9NV64 488 aa20.92■□□□□ 0.94
TPM3-220ENST00000509601 ABCB11O95342 1321 aa20.92■□□□□ 0.94
TPM3-220ENST00000509601 LRRC37A2A6NM11 1700 aa20.91■□□□□ 0.94
TPM3-220ENST00000509601 DCDC2CA8MYV0 355 aa20.91■□□□□ 0.94
TPM3-220ENST00000509601 TROAPQ12815 778 aa20.91■□□□□ 0.94
TPM3-220ENST00000509601 SHHQ15465 462 aa20.91■□□□□ 0.94
TPM3-220ENST00000509601 C9orf50Q5SZB4 431 aa20.91■□□□□ 0.94
TPM3-220ENST00000509601 GPR153Q6NV75 609 aa20.91■□□□□ 0.94
TPM3-220ENST00000509601 CXCL17Q6UXB2 119 aa20.91■□□□□ 0.94
TPM3-220ENST00000509601 CENPQQ7L2Z9 268 aaPredicted RBP20.91■□□□□ 0.94
TPM3-220ENST00000509601 SLC43A3Q8NBI5 491 aa20.91■□□□□ 0.94
TPM3-220ENST00000509601 ESYT1Q9BSJ8 1104 aa20.91■□□□□ 0.94
TPM3-220ENST00000509601 COL20A1Q9P218 1284 aa20.91■□□□□ 0.94
TPM3-220ENST00000509601 GRIN2DO15399 1336 aa20.9■□□□□ 0.94
TPM3-220ENST00000509601 A0A0U1RQG5 324 aaPredicted RBP20.9■□□□□ 0.94
TPM3-220ENST00000509601 DHX16O60231 1041 aaKnown RBP20.9■□□□□ 0.94
TPM3-220ENST00000509601 PPP1R11O60927 126 aaPredicted RBP20.9■□□□□ 0.94
TPM3-220ENST00000509601 GRM4Q14833 912 aa20.9■□□□□ 0.94
TPM3-220ENST00000509601 RALYLQ86SE5 291 aaKnown RBP20.9■□□□□ 0.94
TPM3-220ENST00000509601 TBX21Q9UL17 535 aa20.9■□□□□ 0.94
TPM3-220ENST00000509601 MRPL11Q9Y3B7 192 aaKnown RBP20.9■□□□□ 0.94
TPM3-220ENST00000509601 BAZ2BQ9UIF8 2168 aaKnown RBP20.89■□□□□ 0.94
TPM3-220ENST00000509601 OPLAHO14841 1288 aa20.89■□□□□ 0.93
TPM3-220ENST00000509601 EPHB4P54760 987 aa20.89■□□□□ 0.93
TPM3-220ENST00000509601 PDE4DQ08499 809 aa20.89■□□□□ 0.93
TPM3-220ENST00000509601 COL9A3Q14050 684 aaPredicted RBP20.89■□□□□ 0.93
TPM3-220ENST00000509601 WTAPQ15007 396 aa20.89■□□□□ 0.93
TPM3-220ENST00000509601 MCF2L2Q86YR7 1114 aa20.89■□□□□ 0.93
TPM3-220ENST00000509601 RIOX1Q9H6W3 641 aa20.89■□□□□ 0.93
TPM3-220ENST00000509601 ERICH2A1L162 156 aa20.88■□□□□ 0.93
TPM3-220ENST00000509601 ZBTB5O15062 677 aa20.88■□□□□ 0.93
TPM3-220ENST00000509601 CYTH3O43739 400 aa20.88■□□□□ 0.93
TPM3-220ENST00000509601 CABYRO75952 493 aa20.88■□□□□ 0.93
TPM3-220ENST00000509601 CD4P01730 458 aa20.88■□□□□ 0.93
TPM3-220ENST00000509601 RAG1P15918 1043 aa20.88■□□□□ 0.93
TPM3-220ENST00000509601 NECTIN1Q15223 517 aa20.88■□□□□ 0.93
TPM3-220ENST00000509601 BMP2KLQ5H9B9 411 aa20.88■□□□□ 0.93
TPM3-220ENST00000509601 FAM126BQ8IXS8 530 aa20.88■□□□□ 0.93
TPM3-220ENST00000509601 AMNQ9BXJ7 453 aa20.88■□□□□ 0.93
TPM3-220ENST00000509601 GPHNQ9NQX3 736 aaPredicted RBP20.88■□□□□ 0.93
TPM3-220ENST00000509601 MROH7Q68CQ1 1323 aa20.87■□□□□ 0.93
TPM3-220ENST00000509601 SLC27A2O14975 620 aa20.87■□□□□ 0.93
TPM3-220ENST00000509601 ZEB2O60315 1214 aa20.87■□□□□ 0.93
TPM3-220ENST00000509601 TIMP1P01033 207 aa20.87■□□□□ 0.93
TPM3-220ENST00000509601 GHRHRQ02643 423 aa20.87■□□□□ 0.93
TPM3-220ENST00000509601 TMEM67Q5HYA8 995 aa20.87■□□□□ 0.93
TPM3-220ENST00000509601 COPS5Q92905 334 aa20.87■□□□□ 0.93
TPM3-220ENST00000509601 PIGSQ96S52 555 aa20.87■□□□□ 0.93
TPM3-220ENST00000509601 MPHOSPH6Q99547 160 aaKnown RBP20.87■□□□□ 0.93
TPM3-220ENST00000509601 MYH6P13533 1939 aa20.86■□□□□ 0.93
TPM3-220ENST00000509601 B4DLN1 442 aa20.86■□□□□ 0.93
TPM3-220ENST00000509601 ARIH2O95376 493 aa20.86■□□□□ 0.93
TPM3-220ENST00000509601 MRPL12P52815 198 aaKnown RBP20.86■□□□□ 0.93
TPM3-220ENST00000509601 ITGA7Q13683 1181 aa20.86■□□□□ 0.93
TPM3-220ENST00000509601 SART3Q15020 963 aaKnown RBP20.86■□□□□ 0.93
TPM3-220ENST00000509601 CCDC62Q6P9F0 684 aa20.86■□□□□ 0.93
TPM3-220ENST00000509601 Q7L0L9 218 aa20.86■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms