RNA–Protein interactions for RNA: ENST00000509599.5

PTPN20-221, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best) BASIC

Gene PTPN20, Length 945 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-221ENST00000509599 USP44Q9H0E7 712 aa11.76□□□□□ -0.53
PTPN20-221ENST00000509599 ASTN1O14525 1302 aa11.76□□□□□ -0.53
PTPN20-221ENST00000509599 IL16Q14005 1332 aa11.76□□□□□ -0.53
PTPN20-221ENST00000509599 ZFHX4Q86UP3 3567 aa11.76□□□□□ -0.53
PTPN20-221ENST00000509599 EP300Q09472 2414 aaPredicted RBP11.75□□□□□ -0.53
PTPN20-221ENST00000509599 H0Y858 1186 aa11.75□□□□□ -0.53
PTPN20-221ENST00000509599 FLOT1O75955 427 aa11.75□□□□□ -0.53
PTPN20-221ENST00000509599 BAG3O95817 575 aa11.75□□□□□ -0.53
PTPN20-221ENST00000509599 ERVK-21P61565 698 aa11.75□□□□□ -0.53
PTPN20-221ENST00000509599 ACVR2BQ13705 512 aa11.75□□□□□ -0.53
PTPN20-221ENST00000509599 SEPT2Q15019 361 aa11.75□□□□□ -0.53
PTPN20-221ENST00000509599 CERKLQ49MI3 558 aaPredicted RBP11.75□□□□□ -0.53
PTPN20-221ENST00000509599 PADI6Q6TGC4 694 aa11.75□□□□□ -0.53
PTPN20-221ENST00000509599 ATF7IPQ6VMQ6 1270 aa11.75□□□□□ -0.53
PTPN20-221ENST00000509599 TMCO2Q7Z6W1 182 aaPredicted RBP11.75□□□□□ -0.53
PTPN20-221ENST00000509599 SPATA5Q8NB90 893 aa11.75□□□□□ -0.53
PTPN20-221ENST00000509599 XAGE2Q96GT9 111 aa11.75□□□□□ -0.53
PTPN20-221ENST00000509599 IL21Q9HBE4 155 aa11.75□□□□□ -0.53
PTPN20-221ENST00000509599 TLR9Q9NR96 1032 aa11.75□□□□□ -0.53
PTPN20-221ENST00000509599 FAM50BQ9Y247 325 aa11.75□□□□□ -0.53
PTPN20-221ENST00000509599 DNAH14Q0VDD8 3507 aa11.75□□□□□ -0.53
PTPN20-221ENST00000509599 CYP2C9P11712 490 aa11.74□□□□□ -0.53
PTPN20-221ENST00000509599 SHMT1P34896 483 aa11.74□□□□□ -0.53
PTPN20-221ENST00000509599 IL15P40933 162 aaPredicted RBP11.74□□□□□ -0.53
PTPN20-221ENST00000509599 PSMC6P62333 389 aa11.74□□□□□ -0.53
PTPN20-221ENST00000509599 COL19A1Q14993 1142 aa11.74□□□□□ -0.53
PTPN20-221ENST00000509599 CCDC27Q2M243 656 aa11.74□□□□□ -0.53
PTPN20-221ENST00000509599 CNTNAP3BQ96NU0 1288 aa11.74□□□□□ -0.53
PTPN20-221ENST00000509599 FSD1Q9BTV5 496 aa11.74□□□□□ -0.53
PTPN20-221ENST00000509599 CNTNAP3Q9BZ76 1288 aa11.74□□□□□ -0.53
PTPN20-221ENST00000509599 IRF2BPLQ9H1B7 796 aa11.74□□□□□ -0.53
PTPN20-221ENST00000509599 SERPINB13Q9UIV8 391 aa11.74□□□□□ -0.53
PTPN20-221ENST00000509599 ADAMTS5Q9UNA0 930 aa11.74□□□□□ -0.53
PTPN20-221ENST00000509599 DNAJC25-GNG10A0A024R161 153 aa11.73□□□□□ -0.53
PTPN20-221ENST00000509599 A0A1B0GUL7 405 aa11.73□□□□□ -0.53
PTPN20-221ENST00000509599 CABYRO75952 493 aa11.73□□□□□ -0.53
PTPN20-221ENST00000509599 NAA16Q6N069 864 aaPredicted RBP11.73□□□□□ -0.53
PTPN20-221ENST00000509599 MICAL3Q7RTP6 2002 aa11.73□□□□□ -0.53
PTPN20-221ENST00000509599 PABPC5Q96DU9 382 aaKnown RBP11.73□□□□□ -0.53
PTPN20-221ENST00000509599 TGS1Q96RS0 853 aaKnown RBP11.73□□□□□ -0.53
PTPN20-221ENST00000509599 EHD4Q9H223 541 aa11.73□□□□□ -0.53
PTPN20-221ENST00000509599 ALDH8A1Q9H2A2 487 aaPredicted RBP11.73□□□□□ -0.53
PTPN20-221ENST00000509599 ABHD16BQ9H3Z7 469 aa11.73□□□□□ -0.53
PTPN20-221ENST00000509599 CABP5Q9NP86 173 aa11.73□□□□□ -0.53
PTPN20-221ENST00000509599 TRMT13Q9NUP7 481 aaKnown RBP11.73□□□□□ -0.53
PTPN20-221ENST00000509599 LRP2BPQ9P2M1 347 aa11.73□□□□□ -0.53
PTPN20-221ENST00000509599 PA2G4Q9UQ80 394 aaKnown RBP11.73□□□□□ -0.53
PTPN20-221ENST00000509599 SCN10AQ9Y5Y9 1956 aa11.73□□□□□ -0.53
PTPN20-221ENST00000509599 CEP250Q9BV73 2442 aa11.72□□□□□ -0.53
PTPN20-221ENST00000509599 LINC01553A4QN01 128 aa11.72□□□□□ -0.53
PTPN20-221ENST00000509599 PTGS1P23219 599 aa11.72□□□□□ -0.53
PTPN20-221ENST00000509599 STAT3P40763 770 aa11.72□□□□□ -0.53
PTPN20-221ENST00000509599 MVPQ14764 893 aaKnown RBP11.72□□□□□ -0.53
PTPN20-221ENST00000509599 SMAD2Q15796 467 aaKnown RBP11.72□□□□□ -0.53
PTPN20-221ENST00000509599 SPICE1Q8N0Z3 855 aa11.72□□□□□ -0.53
PTPN20-221ENST00000509599 MRPL38Q96DV4 380 aaKnown RBP11.72□□□□□ -0.53
PTPN20-221ENST00000509599 FGD4Q96M96 766 aa11.72□□□□□ -0.53
PTPN20-221ENST00000509599 SEZ6LQ9BYH1 1024 aa11.72□□□□□ -0.53
PTPN20-221ENST00000509599 KATNBL1Q9H079 304 aa11.72□□□□□ -0.53
PTPN20-221ENST00000509599 ZNF214Q9UL59 606 aaPredicted RBP11.72□□□□□ -0.53
PTPN20-221ENST00000509599 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.72□□□□□ -0.53
PTPN20-221ENST00000509599 SPTBN2O15020 2390 aa11.71□□□□□ -0.53
PTPN20-221ENST00000509599 C11orf97A0A1B0GVM6 126 aaPredicted RBP11.71□□□□□ -0.53
PTPN20-221ENST00000509599 AVPR2P30518 371 aa11.71□□□□□ -0.53
PTPN20-221ENST00000509599 RFC2P35250 354 aa11.71□□□□□ -0.53
PTPN20-221ENST00000509599 LTBRP36941 435 aa11.71□□□□□ -0.53
PTPN20-221ENST00000509599 NBL1P41271 181 aa11.71□□□□□ -0.53
PTPN20-221ENST00000509599 MCAMP43121 646 aa11.71□□□□□ -0.53
PTPN20-221ENST00000509599 WDR5P61964 334 aaKnown RBP11.71□□□□□ -0.53
PTPN20-221ENST00000509599 DYNLL1P63167 89 aaKnown RBP11.71□□□□□ -0.53
PTPN20-221ENST00000509599 FSCN1Q16658 493 aaKnown RBP11.71□□□□□ -0.53
PTPN20-221ENST00000509599 SWT1Q5T5J6 900 aaKnown RBP11.71□□□□□ -0.53
PTPN20-221ENST00000509599 EP400NLQ6ZTU2 488 aa11.71□□□□□ -0.53
PTPN20-221ENST00000509599 REPS2Q8NFH8 660 aa11.71□□□□□ -0.53
PTPN20-221ENST00000509599 POP1Q99575 1024 aaKnown RBP11.71□□□□□ -0.53
PTPN20-221ENST00000509599 FTOQ9C0B1 505 aaKnown RBP eCLIP11.71□□□□□ -0.53
PTPN20-221ENST00000509599 NPDC1Q9NQX5 325 aaPredicted RBP11.71□□□□□ -0.53
PTPN20-221ENST00000509599 FBXO28Q9NVF7 368 aa11.71□□□□□ -0.53
PTPN20-221ENST00000509599 TNKSO95271 1327 aa11.7□□□□□ -0.54
PTPN20-221ENST00000509599 VWA5AO00534 786 aa11.7□□□□□ -0.54
PTPN20-221ENST00000509599 BAIAP3O94812 1187 aa11.7□□□□□ -0.54
PTPN20-221ENST00000509599 IQCF3P0C7M6 154 aa11.7□□□□□ -0.54
PTPN20-221ENST00000509599 ARID4AP29374 1257 aaPredicted RBP11.7□□□□□ -0.54
PTPN20-221ENST00000509599 KCNJ6P48051 423 aa11.7□□□□□ -0.54
PTPN20-221ENST00000509599 DEFB103AP81534 67 aa11.7□□□□□ -0.54
PTPN20-221ENST00000509599 ZXDAP98168 799 aa11.7□□□□□ -0.54
PTPN20-221ENST00000509599 TCEAL5Q5H9L2 206 aa11.7□□□□□ -0.54
PTPN20-221ENST00000509599 TTC13Q8NBP0 860 aa11.7□□□□□ -0.54
PTPN20-221ENST00000509599 ZNF516Q92618 1163 aa11.7□□□□□ -0.54
PTPN20-221ENST00000509599 C17orf80Q9BSJ5 609 aa11.7□□□□□ -0.54
PTPN20-221ENST00000509599 GNEQ9Y223 722 aaKnown RBP11.7□□□□□ -0.54
PTPN20-221ENST00000509599 MBTPS2O43462 519 aa11.69□□□□□ -0.54
PTPN20-221ENST00000509599 COPB2P35606 906 aa11.69□□□□□ -0.54
PTPN20-221ENST00000509599 TIGD5Q53EQ6 642 aa11.69□□□□□ -0.54
PTPN20-221ENST00000509599 ARMCX2Q7L311 632 aa11.69□□□□□ -0.54
PTPN20-221ENST00000509599 TLK2Q86UE8 772 aa11.69□□□□□ -0.54
PTPN20-221ENST00000509599 CLEC10AQ8IUN9 316 aa11.69□□□□□ -0.54
PTPN20-221ENST00000509599 SIAH1Q8IUQ4 282 aa11.69□□□□□ -0.54
PTPN20-221ENST00000509599 MAGEB6Q8N7X4 407 aa11.69□□□□□ -0.54
PTPN20-221ENST00000509599 BANK1Q8NDB2 785 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms