RNA–Protein interactions for RNA: ENST00000509529.1

CAST-226, Transcript of calpastatin, humanhuman

TSL 2

Gene CAST, Length 3,066 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-226ENST00000509529 MAP3K4Q9Y6R4 1608 aa2.68□□□□□ -1.98
CAST-226ENST00000509529 NSD2O96028 1365 aa2.68□□□□□ -1.98
CAST-226ENST00000509529 DIP2AQ14689 1571 aa2.68□□□□□ -1.98
CAST-226ENST00000509529 TRAPPC8Q9Y2L5 1435 aa2.67□□□□□ -1.98
CAST-226ENST00000509529 TEX51A0A1B0GUA7 166 aa2.67□□□□□ -1.98
CAST-226ENST00000509529 ANKRD18BA2A2Z9 1011 aa2.67□□□□□ -1.98
CAST-226ENST00000509529 EIF3JO75822 258 aaKnown RBP2.67□□□□□ -1.98
CAST-226ENST00000509529 ZRANB2O95218 330 aaKnown RBP eCLIP2.67□□□□□ -1.98
CAST-226ENST00000509529 ESR1P03372 595 aa2.67□□□□□ -1.98
CAST-226ENST00000509529 NPR3P17342 541 aa2.67□□□□□ -1.98
CAST-226ENST00000509529 MAGEA9P43362 315 aa2.67□□□□□ -1.98
CAST-226ENST00000509529 MCM2P49736 904 aa2.67□□□□□ -1.98
CAST-226ENST00000509529 MAP2K1Q02750 393 aaPredicted RBP2.67□□□□□ -1.98
CAST-226ENST00000509529 DDR1Q08345 913 aa2.67□□□□□ -1.98
CAST-226ENST00000509529 CUL4AQ13619 759 aa2.67□□□□□ -1.98
CAST-226ENST00000509529 BMS1Q14692 1282 aaKnown RBP2.67□□□□□ -1.98
CAST-226ENST00000509529 TIGD5Q53EQ6 642 aa2.67□□□□□ -1.98
CAST-226ENST00000509529 SFRP5Q5T4F7 317 aa2.67□□□□□ -1.98
CAST-226ENST00000509529 MAP1SQ66K74 1059 aaPredicted RBP2.67□□□□□ -1.98
CAST-226ENST00000509529 RBM43Q6ZSC3 357 aaKnown RBP2.67□□□□□ -1.98
CAST-226ENST00000509529 THAP5Q7Z6K1 395 aa2.67□□□□□ -1.98
CAST-226ENST00000509529 SYT8Q8NBV8 401 aa2.67□□□□□ -1.98
CAST-226ENST00000509529 ABCF1Q8NE71 845 aaKnown RBP eCLIP2.67□□□□□ -1.98
CAST-226ENST00000509529 GOLGA5Q8TBA6 731 aa2.67□□□□□ -1.98
CAST-226ENST00000509529 GPBAR1Q8TDU6 330 aa2.67□□□□□ -1.98
CAST-226ENST00000509529 SYAP1Q96A49 352 aaPredicted RBP2.67□□□□□ -1.98
CAST-226ENST00000509529 EXOC4Q96A65 974 aa2.67□□□□□ -1.98
CAST-226ENST00000509529 CRELD1Q96HD1 420 aa2.67□□□□□ -1.98
CAST-226ENST00000509529 ERO1AQ96HE7 468 aa2.67□□□□□ -1.98
CAST-226ENST00000509529 SLC6A17Q9H1V8 727 aa2.67□□□□□ -1.98
CAST-226ENST00000509529 RWDD1Q9H446 243 aaPredicted RBP2.67□□□□□ -1.98
CAST-226ENST00000509529 CWC15Q9P013 229 aaKnown RBP2.67□□□□□ -1.98
CAST-226ENST00000509529 ZSWIM5Q9P217 1185 aa2.67□□□□□ -1.98
CAST-226ENST00000509529 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP2.67□□□□□ -1.98
CAST-226ENST00000509529 A2MP01023 1474 aa2.67□□□□□ -1.98
CAST-226ENST00000509529 CLTCQ00610 1675 aaKnown RBP2.67□□□□□ -1.98
CAST-226ENST00000509529 RPAP1Q9BWH6 1393 aaPredicted RBP2.67□□□□□ -1.98
CAST-226ENST00000509529 TARBP1Q13395 1621 aaKnown RBP2.67□□□□□ -1.98
CAST-226ENST00000509529 COL22A1Q8NFW1 1626 aaPredicted RBP2.67□□□□□ -1.98
CAST-226ENST00000509529 A0A1B0GUL7 405 aa2.67□□□□□ -1.98
CAST-226ENST00000509529 SRRM3A6NNA2 597 aaPredicted RBP2.67□□□□□ -1.98
CAST-226ENST00000509529 GOLGA6L6A8MZA4 724 aa2.67□□□□□ -1.98
CAST-226ENST00000509529 NRDCO43847 1150 aa2.67□□□□□ -1.98
CAST-226ENST00000509529 IVLP07476 585 aa2.67□□□□□ -1.98
CAST-226ENST00000509529 TPM1P09493 284 aa2.67□□□□□ -1.98
CAST-226ENST00000509529 IRX1P78414 480 aaPredicted RBP2.67□□□□□ -1.98
CAST-226ENST00000509529 TMEM132EQ6IEE7 984 aa2.67□□□□□ -1.98
CAST-226ENST00000509529 PRPF40BQ6NWY9 871 aaKnown RBP2.67□□□□□ -1.98
CAST-226ENST00000509529 PLCD4Q9BRC7 762 aa2.67□□□□□ -1.98
CAST-226ENST00000509529 TRAK1Q9UPV9 953 aa2.67□□□□□ -1.98
CAST-226ENST00000509529 ARAP3Q8WWN8 1544 aa2.67□□□□□ -1.98
CAST-226ENST00000509529 TMEM238LA0A1B0GVL6 79 aa2.67□□□□□ -1.98
CAST-226ENST00000509529 CTAGE5O15320 804 aa2.67□□□□□ -1.98
CAST-226ENST00000509529 COQ9O75208 318 aa2.67□□□□□ -1.98
CAST-226ENST00000509529 IGHDP01880 384 aa2.67□□□□□ -1.98
CAST-226ENST00000509529 RAD51AP2Q09MP3 1159 aa2.67□□□□□ -1.98
CAST-226ENST00000509529 LMOD3Q0VAK6 560 aa2.67□□□□□ -1.98
CAST-226ENST00000509529 CDC37Q16543 378 aaPredicted RBP2.67□□□□□ -1.98
CAST-226ENST00000509529 CCDC93Q567U6 631 aa2.67□□□□□ -1.98
CAST-226ENST00000509529 SARM1Q6SZW1 724 aa2.67□□□□□ -1.98
CAST-226ENST00000509529 MPRIPQ6WCQ1 1025 aa2.67□□□□□ -1.98
CAST-226ENST00000509529 ANKRD23Q86SG2 305 aa2.67□□□□□ -1.98
CAST-226ENST00000509529 TAX1BP1Q86VP1 789 aa2.67□□□□□ -1.98
CAST-226ENST00000509529 APLFQ8IW19 511 aaPredicted RBP2.67□□□□□ -1.98
CAST-226ENST00000509529 SULF2Q8IWU5 870 aa2.67□□□□□ -1.98
CAST-226ENST00000509529 FBXO18Q8NFZ0 1043 aa2.67□□□□□ -1.98
CAST-226ENST00000509529 TESK2Q96S53 571 aa2.67□□□□□ -1.98
CAST-226ENST00000509529 GPN3Q9UHW5 284 aaPredicted RBP2.67□□□□□ -1.98
CAST-226ENST00000509529 GGA2Q9UJY4 613 aa2.67□□□□□ -1.98
CAST-226ENST00000509529 MYRFQ9Y2G1 1151 aa2.67□□□□□ -1.98
CAST-226ENST00000509529 ADGRB3O60242 1522 aa2.67□□□□□ -1.98
CAST-226ENST00000509529 MED1Q15648 1581 aaPredicted RBP2.67□□□□□ -1.98
CAST-226ENST00000509529 NUP155O75694 1391 aa2.66□□□□□ -1.98
CAST-226ENST00000509529 KIAA0232Q92628 1395 aa2.66□□□□□ -1.98
CAST-226ENST00000509529 ZNF518AQ6AHZ1 1483 aa2.66□□□□□ -1.98
CAST-226ENST00000509529 NEXMIFQ5QGS0 1516 aa2.66□□□□□ -1.98
CAST-226ENST00000509529 SLC22A31A6NKX4 558 aa2.66□□□□□ -1.98
CAST-226ENST00000509529 DCDC2CA8MYV0 355 aa2.66□□□□□ -1.98
CAST-226ENST00000509529 KCNJ4P48050 445 aa2.66□□□□□ -1.98
CAST-226ENST00000509529 AFF3P51826 1226 aaKnown RBP2.66□□□□□ -1.98
CAST-226ENST00000509529 RING1Q06587 406 aa2.66□□□□□ -1.98
CAST-226ENST00000509529 MTA1Q13330 715 aa2.66□□□□□ -1.98
CAST-226ENST00000509529 VMACQ2NL98 169 aa2.66□□□□□ -1.98
CAST-226ENST00000509529 MCTP2Q6DN12 878 aa2.66□□□□□ -1.98
CAST-226ENST00000509529 BRAPQ7Z569 592 aa2.66□□□□□ -1.98
CAST-226ENST00000509529 DACT3Q96B18 629 aaPredicted RBP2.66□□□□□ -1.98
CAST-226ENST00000509529 TEPSINQ96N21 525 aa2.66□□□□□ -1.98
CAST-226ENST00000509529 BDH2Q9BUT1 245 aa2.66□□□□□ -1.98
CAST-226ENST00000509529 SRRTQ9BXP5 876 aaKnown RBP2.66□□□□□ -1.98
CAST-226ENST00000509529 TMEM39AQ9NV64 488 aa2.66□□□□□ -1.98
CAST-226ENST00000509529 ZNF446Q9NWS9 450 aa2.66□□□□□ -1.98
CAST-226ENST00000509529 TERF2IPQ9NYB0 399 aa2.66□□□□□ -1.98
CAST-226ENST00000509529 KCNG1Q9UIX4 513 aa2.66□□□□□ -1.98
CAST-226ENST00000509529 ZNF777Q9ULD5 760 aaPredicted RBP2.66□□□□□ -1.98
CAST-226ENST00000509529 MSH6P52701 1360 aa2.66□□□□□ -1.98
CAST-226ENST00000509529 TROQ12816 1431 aaPredicted RBP2.66□□□□□ -1.98
CAST-226ENST00000509529 NPATQ14207 1427 aa2.66□□□□□ -1.98
CAST-226ENST00000509529 COL3A1P02461 1466 aaPredicted RBP2.66□□□□□ -1.98
CAST-226ENST00000509529 TOPBP1Q92547 1522 aa2.66□□□□□ -1.98
CAST-226ENST00000509529 LRIG2O94898 1065 aa2.66□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms