RNA–Protein interactions for RNA: ENST00000509409.5

TPM3-219, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 1,248 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-219ENST00000509409 PDE4DQ08499 809 aa18.03■□□□□ 0.48
TPM3-219ENST00000509409 ITGA7Q13683 1181 aa18.03■□□□□ 0.48
TPM3-219ENST00000509409 USH1GQ495M9 461 aa18.03■□□□□ 0.48
TPM3-219ENST00000509409 TMEM63BQ5T3F8 832 aa18.03■□□□□ 0.48
TPM3-219ENST00000509409 FAM126BQ8IXS8 530 aa18.03■□□□□ 0.48
TPM3-219ENST00000509409 PNMA1Q8ND90 353 aa18.03■□□□□ 0.48
TPM3-219ENST00000509409 MORC4Q8TE76 937 aa18.03■□□□□ 0.48
TPM3-219ENST00000509409 CLEC4DQ8WXI8 215 aa18.03■□□□□ 0.48
TPM3-219ENST00000509409 DSCC1Q9BVC3 393 aa18.03■□□□□ 0.48
TPM3-219ENST00000509409 WDR11Q9BZH6 1224 aa18.03■□□□□ 0.48
TPM3-219ENST00000509409 HSFX4A0A1B0GTS1 333 aaPredicted RBP18.02■□□□□ 0.48
TPM3-219ENST00000509409 HSFX3A0A1B0GWH4 333 aaPredicted RBP18.02■□□□□ 0.48
TPM3-219ENST00000509409 B4E1Z4 1266 aa18.02■□□□□ 0.48
TPM3-219ENST00000509409 NT5C2P49902 561 aa18.02■□□□□ 0.48
TPM3-219ENST00000509409 DUSP28Q4G0W2 176 aa18.02■□□□□ 0.48
TPM3-219ENST00000509409 SLC30A10Q6XR72 485 aa18.02■□□□□ 0.48
TPM3-219ENST00000509409 ZSCAN10Q96SZ4 725 aaPredicted RBP18.02■□□□□ 0.48
TPM3-219ENST00000509409 CDX2Q99626 313 aaPredicted RBP18.02■□□□□ 0.48
TPM3-219ENST00000509409 CPVLQ9H3G5 476 aa18.02■□□□□ 0.48
TPM3-219ENST00000509409 LTBP2Q14767 1821 aa18.01■□□□□ 0.47
TPM3-219ENST00000509409 LOC102724159A0A0B4J2E5 919 aa18.01■□□□□ 0.47
TPM3-219ENST00000509409 B4DLN1 442 aa18.01■□□□□ 0.47
TPM3-219ENST00000509409 DHX16O60231 1041 aaKnown RBP18.01■□□□□ 0.47
TPM3-219ENST00000509409 CSF2RAP15509 400 aa18.01■□□□□ 0.47
TPM3-219ENST00000509409 MRPL12P52815 198 aaKnown RBP18.01■□□□□ 0.47
TPM3-219ENST00000509409 PSMC6P62333 389 aa18.01■□□□□ 0.47
TPM3-219ENST00000509409 RPS6P62753 249 aaKnown RBP18.01■□□□□ 0.47
TPM3-219ENST00000509409 PWP2Q15269 919 aaKnown RBP18.01■□□□□ 0.47
TPM3-219ENST00000509409 BUD13Q9BRD0 619 aaKnown RBP eCLIP18.01■□□□□ 0.473e-15■■■□□ 16.8
TPM3-219ENST00000509409 SEZ6LQ9BYH1 1024 aa18.01■□□□□ 0.47
TPM3-219ENST00000509409 KRT23Q9C075 422 aa18.01■□□□□ 0.47
TPM3-219ENST00000509409 VAT1LQ9HCJ6 419 aa18.01■□□□□ 0.47
TPM3-219ENST00000509409 GPHNQ9NQX3 736 aaPredicted RBP18.01■□□□□ 0.47
TPM3-219ENST00000509409 ZSWIM5Q9P217 1185 aa18.01■□□□□ 0.47
TPM3-219ENST00000509409 LAMA2P24043 3122 aaKnown RBP18.01■□□□□ 0.47
TPM3-219ENST00000509409 MCM3APO60318 1980 aa18■□□□□ 0.47
TPM3-219ENST00000509409 WDR19Q8NEZ3 1342 aa18■□□□□ 0.47
TPM3-219ENST00000509409 CD4P01730 458 aa18■□□□□ 0.47
TPM3-219ENST00000509409 MYL3P08590 195 aa18■□□□□ 0.47
TPM3-219ENST00000509409 ACRP10323 421 aa18■□□□□ 0.47
TPM3-219ENST00000509409 CYP2C18P33260 490 aa18■□□□□ 0.47
TPM3-219ENST00000509409 SLC43A3Q8NBI5 491 aa18■□□□□ 0.47
TPM3-219ENST00000509409 DNERQ8NFT8 737 aa18■□□□□ 0.47
TPM3-219ENST00000509409 OR6J1Q8NGC5 347 aa18■□□□□ 0.47
TPM3-219ENST00000509409 ANKS1AQ92625 1134 aa18■□□□□ 0.47
TPM3-219ENST00000509409 UBAC1Q9BSL1 405 aa18■□□□□ 0.47
TPM3-219ENST00000509409 POLR3EQ9NVU0 708 aa18■□□□□ 0.47
TPM3-219ENST00000509409 CPT1AP50416 773 aa17.99■□□□□ 0.47
TPM3-219ENST00000509409 CACNB1Q02641 598 aaPredicted RBP17.99■□□□□ 0.47
TPM3-219ENST00000509409 CDC37Q16543 378 aaPredicted RBP17.99■□□□□ 0.47
TPM3-219ENST00000509409 BRDTQ58F21 947 aaPredicted RBP17.99■□□□□ 0.47
TPM3-219ENST00000509409 TMEM240Q5SV17 173 aa17.99■□□□□ 0.47
TPM3-219ENST00000509409 ADGRF4Q8IZF3 695 aa17.99■□□□□ 0.47
TPM3-219ENST00000509409 TRPV6Q9H1D0 765 aa17.99■□□□□ 0.47
TPM3-219ENST00000509409 TTYH1Q9H313 450 aaPredicted RBP17.99■□□□□ 0.47
TPM3-219ENST00000509409 HIPK3Q9H422 1215 aa17.99■□□□□ 0.47
TPM3-219ENST00000509409 CNNM2Q9H8M5 875 aa17.99■□□□□ 0.47
TPM3-219ENST00000509409 GRIN2DO15399 1336 aa17.98■□□□□ 0.47
TPM3-219ENST00000509409 TNKSO95271 1327 aa17.98■□□□□ 0.47
TPM3-219ENST00000509409 RBM47A0AV96 593 aaKnown RBP17.98■□□□□ 0.47
TPM3-219ENST00000509409 PARP1P09874 1014 aaKnown RBP17.98■□□□□ 0.47
TPM3-219ENST00000509409 PPP2R5BQ15173 497 aa17.98■□□□□ 0.47
TPM3-219ENST00000509409 ASPRV1Q53RT3 343 aa17.98■□□□□ 0.47
TPM3-219ENST00000509409 ZNF365Q70YC5 407 aa17.98■□□□□ 0.47
TPM3-219ENST00000509409 C16orf59Q7L2K0 433 aa17.98■□□□□ 0.47
TPM3-219ENST00000509409 ENAHQ8N8S7 591 aaPredicted RBP17.98■□□□□ 0.47
TPM3-219ENST00000509409 RGS22Q8NE09 1264 aa17.98■□□□□ 0.47
TPM3-219ENST00000509409 MYLIPQ8WY64 445 aa17.98■□□□□ 0.47
TPM3-219ENST00000509409 ABCB11O95342 1321 aa17.98■□□□□ 0.47
TPM3-219ENST00000509409 NKRFO15226 690 aaKnown RBP eCLIP17.97■□□□□ 0.47
TPM3-219ENST00000509409 CCL23P55773 120 aa17.97■□□□□ 0.47
TPM3-219ENST00000509409 IFIT1BQ5T764 474 aaKnown RBP17.97■□□□□ 0.47
TPM3-219ENST00000509409 PSRC1Q6PGN9 363 aaPredicted RBP17.97■□□□□ 0.47
TPM3-219ENST00000509409 MCF2L2Q86YR7 1114 aa17.97■□□□□ 0.47
TPM3-219ENST00000509409 SCFD2Q8WU76 684 aa17.97■□□□□ 0.47
TPM3-219ENST00000509409 TBC1D5Q92609 795 aa17.97■□□□□ 0.47
TPM3-219ENST00000509409 IL23AQ9NPF7 189 aa17.97■□□□□ 0.47
TPM3-219ENST00000509409 RAD50Q92878 1312 aa17.97■□□□□ 0.47
TPM3-219ENST00000509409 B4GALT4O60513 344 aa17.96■□□□□ 0.47
TPM3-219ENST00000509409 FGBP02675 491 aa17.96■□□□□ 0.47
TPM3-219ENST00000509409 TXNP10599 105 aaKnown RBP17.96■□□□□ 0.47
TPM3-219ENST00000509409 DNAJB2P25686 324 aa17.96■□□□□ 0.47
TPM3-219ENST00000509409 PDE4AP27815 886 aa17.96■□□□□ 0.47
TPM3-219ENST00000509409 IRX6P78412 446 aaPredicted RBP17.96■□□□□ 0.47
TPM3-219ENST00000509409 TRDNQ13061 729 aa17.96■□□□□ 0.47
TPM3-219ENST00000509409 TTC22Q5TAA0 569 aa17.96■□□□□ 0.47
TPM3-219ENST00000509409 FBXO11Q86XK2 927 aa17.96■□□□□ 0.47
TPM3-219ENST00000509409 RUFY2Q8WXA3 655 aa17.96■□□□□ 0.47
TPM3-219ENST00000509409 COPS5Q92905 334 aa17.96■□□□□ 0.47
TPM3-219ENST00000509409 MTG1Q9BT17 334 aaPredicted RBP17.96■□□□□ 0.47
TPM3-219ENST00000509409 ALDH8A1Q9H2A2 487 aaPredicted RBP17.96■□□□□ 0.47
TPM3-219ENST00000509409 MTIF3Q9H2K0 278 aaKnown RBP17.96■□□□□ 0.47
TPM3-219ENST00000509409 MRPL11Q9Y3B7 192 aaKnown RBP17.96■□□□□ 0.47
TPM3-219ENST00000509409 TMEM265A0A087WTH1 108 aa17.95■□□□□ 0.46
TPM3-219ENST00000509409 SUPT20HL2P0C7V6 817 aa17.95■□□□□ 0.46
TPM3-219ENST00000509409 FOSL2P15408 326 aa17.95■□□□□ 0.46
TPM3-219ENST00000509409 EDNRBP24530 442 aa17.95■□□□□ 0.46
TPM3-219ENST00000509409 PURAQ00577 322 aaKnown RBP17.95■□□□□ 0.46
TPM3-219ENST00000509409 TTLL4Q14679 1199 aa17.95■□□□□ 0.46
TPM3-219ENST00000509409 QRICH1Q2TAL8 776 aa17.95■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms