RNA–Protein interactions for RNA: ENST00000509354.1

TRIO-213, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 2

Gene TRIO, Length 801 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-213ENST00000509354 NEDD4P46934 1319 aa8.52□□□□□ -1.05
TRIO-213ENST00000509354 WDR19Q8NEZ3 1342 aa8.52□□□□□ -1.05
TRIO-213ENST00000509354 LAMA3Q16787 3333 aa8.51□□□□□ -1.05
TRIO-213ENST00000509354 SLC15A5A6NIM6 579 aa8.51□□□□□ -1.05
TRIO-213ENST00000509354 TSPY2A6NKD2 308 aa8.51□□□□□ -1.05
TRIO-213ENST00000509354 VWA5AO00534 786 aa8.51□□□□□ -1.05
TRIO-213ENST00000509354 ORC4O43929 436 aa8.51□□□□□ -1.05
TRIO-213ENST00000509354 RANBP6O60518 1105 aaKnown RBP8.51□□□□□ -1.05
TRIO-213ENST00000509354 FARP2O94887 1054 aaPredicted RBP8.51□□□□□ -1.05
TRIO-213ENST00000509354 TTLL1O95922 423 aa8.51□□□□□ -1.05
TRIO-213ENST00000509354 SLC3A2P08195 630 aaKnown RBP8.51□□□□□ -1.05
TRIO-213ENST00000509354 TAL1P17542 331 aaPredicted RBP8.51□□□□□ -1.05
TRIO-213ENST00000509354 RPS6KB1P23443 525 aa8.51□□□□□ -1.05
TRIO-213ENST00000509354 ADORA2AP29274 412 aa8.51□□□□□ -1.05
TRIO-213ENST00000509354 EXOSC10Q01780 885 aaKnown RBP8.51□□□□□ -1.05
TRIO-213ENST00000509354 CACNB2Q08289 660 aaPredicted RBP8.51□□□□□ -1.05
TRIO-213ENST00000509354 COL9A3Q14050 684 aaPredicted RBP8.51□□□□□ -1.05
TRIO-213ENST00000509354 MAP3K21Q5TCX8 1036 aa8.51□□□□□ -1.05
TRIO-213ENST00000509354 STOX1Q6ZVD7 989 aa8.51□□□□□ -1.05
TRIO-213ENST00000509354 MB21D1Q8N884 522 aa8.51□□□□□ -1.05
TRIO-213ENST00000509354 KIFC2Q96AC6 838 aa8.51□□□□□ -1.05
TRIO-213ENST00000509354 SLF1Q9BQI6 1058 aa8.51□□□□□ -1.05
TRIO-213ENST00000509354 ANP32EQ9BTT0 268 aa8.51□□□□□ -1.05
TRIO-213ENST00000509354 ZNF287Q9HBT7 754 aa8.51□□□□□ -1.05
TRIO-213ENST00000509354 IL17RBQ9NRM6 502 aa8.51□□□□□ -1.05
TRIO-213ENST00000509354 TOMM22Q9NS69 142 aa8.51□□□□□ -1.05
TRIO-213ENST00000509354 HOXC10Q9NYD6 342 aa8.51□□□□□ -1.05
TRIO-213ENST00000509354 ZNF214Q9UL59 606 aaPredicted RBP8.51□□□□□ -1.05
TRIO-213ENST00000509354 ISY1Q9ULR0 285 aaKnown RBP8.51□□□□□ -1.05
TRIO-213ENST00000509354 MTMR7Q9Y216 660 aa8.51□□□□□ -1.05
TRIO-213ENST00000509354 IVNS1ABPQ9Y6Y0 642 aa8.51□□□□□ -1.05
TRIO-213ENST00000509354 BAZ2BQ9UIF8 2168 aaKnown RBP8.51□□□□□ -1.05
TRIO-213ENST00000509354 SZT2Q5T011 3432 aa8.5□□□□□ -1.05
TRIO-213ENST00000509354 COBLO75128 1261 aa8.5□□□□□ -1.05
TRIO-213ENST00000509354 SGPL1O95470 568 aa8.5□□□□□ -1.05
TRIO-213ENST00000509354 HMGB1P09429 215 aaKnown RBP8.5□□□□□ -1.05
TRIO-213ENST00000509354 XRCC5P13010 732 aaKnown RBP8.5□□□□□ -1.05
TRIO-213ENST00000509354 CYP2C19P33261 490 aa8.5□□□□□ -1.05
TRIO-213ENST00000509354 AK2P54819 239 aa8.5□□□□□ -1.05
TRIO-213ENST00000509354 ST3GAL1Q11201 340 aa8.5□□□□□ -1.05
TRIO-213ENST00000509354 SLFN13Q68D06 897 aa8.5□□□□□ -1.05
TRIO-213ENST00000509354 KCTD1Q719H9 257 aa8.5□□□□□ -1.05
TRIO-213ENST00000509354 SPNS2Q8IVW8 549 aa8.5□□□□□ -1.05
TRIO-213ENST00000509354 GMCL1P1Q8NEA9 526 aa8.5□□□□□ -1.05
TRIO-213ENST00000509354 SHCBP1Q8NEM2 672 aa8.5□□□□□ -1.05
TRIO-213ENST00000509354 TRPV1Q8NER1 839 aa8.5□□□□□ -1.05
TRIO-213ENST00000509354 MKL1Q969V6 931 aa8.5□□□□□ -1.05
TRIO-213ENST00000509354 ZSCAN31Q96LW9 406 aaPredicted RBP8.5□□□□□ -1.05
TRIO-213ENST00000509354 UPF3BQ9BZI7 483 aaKnown RBP8.5□□□□□ -1.05
TRIO-213ENST00000509354 HMX1Q9NP08 348 aaPredicted RBP8.5□□□□□ -1.05
TRIO-213ENST00000509354 CTNNA3Q9UI47 895 aa8.5□□□□□ -1.05
TRIO-213ENST00000509354 ADAMTS5Q9UNA0 930 aa8.5□□□□□ -1.05
TRIO-213ENST00000509354 STX8Q9UNK0 236 aa8.5□□□□□ -1.05
TRIO-213ENST00000509354 LIMCH1Q9UPQ0 1083 aa8.5□□□□□ -1.05
TRIO-213ENST00000509354 CYP46A1Q9Y6A2 500 aa8.5□□□□□ -1.05
TRIO-213ENST00000509354 RPTORQ8N122 1335 aa8.5□□□□□ -1.05
TRIO-213ENST00000509354 TFRCP02786 760 aaKnown RBP8.49□□□□□ -1.05
TRIO-213ENST00000509354 PGK2P07205 417 aa8.49□□□□□ -1.05
TRIO-213ENST00000509354 HOXC6P09630 235 aa8.49□□□□□ -1.05
TRIO-213ENST00000509354 FGRP09769 529 aa8.49□□□□□ -1.05
TRIO-213ENST00000509354 BMP3P12645 472 aa8.49□□□□□ -1.05
TRIO-213ENST00000509354 SNAP25P60880 206 aa8.49□□□□□ -1.05
TRIO-213ENST00000509354 TOB2Q14106 344 aaPredicted RBP8.49□□□□□ -1.05
TRIO-213ENST00000509354 ANKRD1Q15327 319 aa8.49□□□□□ -1.05
TRIO-213ENST00000509354 CSPP1Q1MSJ5 1256 aa8.49□□□□□ -1.05
TRIO-213ENST00000509354 SNRNP48Q6IEG0 339 aaKnown RBP8.49□□□□□ -1.05
TRIO-213ENST00000509354 RIOX2Q8IUF8 465 aa8.49□□□□□ -1.05
TRIO-213ENST00000509354 CPXCR1Q8N123 301 aa8.49□□□□□ -1.05
TRIO-213ENST00000509354 STAG1Q8WVM7 1258 aa8.49□□□□□ -1.05
TRIO-213ENST00000509354 JAKMIP1Q96N16 626 aaKnown RBP8.49□□□□□ -1.05
TRIO-213ENST00000509354 NEK1Q96PY6 1258 aa8.49□□□□□ -1.05
TRIO-213ENST00000509354 MTA3Q9BTC8 594 aa8.49□□□□□ -1.05
TRIO-213ENST00000509354 RAVER2Q9HCJ3 691 aaKnown RBP8.49□□□□□ -1.05
TRIO-213ENST00000509354 SH2B1Q9NRF2 756 aaPredicted RBP8.49□□□□□ -1.05
TRIO-213ENST00000509354 RIPK3Q9Y572 518 aa8.49□□□□□ -1.05
TRIO-213ENST00000509354 LTBP2Q14767 1821 aa8.48□□□□□ -1.05
TRIO-213ENST00000509354 TMEM232C9JQI7 657 aa8.48□□□□□ -1.05
TRIO-213ENST00000509354 E7EWF7 191 aa8.48□□□□□ -1.05
TRIO-213ENST00000509354 IGHA2P01877 340 aa8.48□□□□□ -1.05
TRIO-213ENST00000509354 NDUFV2P19404 249 aa8.48□□□□□ -1.05
TRIO-213ENST00000509354 CASTP20810 708 aaKnown RBP8.48□□□□□ -1.05
TRIO-213ENST00000509354 STAT3P40763 770 aa8.48□□□□□ -1.05
TRIO-213ENST00000509354 NT5C2P49902 561 aa8.48□□□□□ -1.05
TRIO-213ENST00000509354 IKQ13123 557 aaPredicted RBP8.48□□□□□ -1.05
TRIO-213ENST00000509354 NFKBIBQ15653 356 aa8.48□□□□□ -1.05
TRIO-213ENST00000509354 CCDC96Q2M329 555 aa8.48□□□□□ -1.05
TRIO-213ENST00000509354 PRAMEF19Q5SWL8 479 aa8.48□□□□□ -1.05
TRIO-213ENST00000509354 AKNAD1Q5T1N1 836 aa8.48□□□□□ -1.05
TRIO-213ENST00000509354 MFSD14CQ5VZR4 134 aa8.48□□□□□ -1.05
TRIO-213ENST00000509354 ANO1Q5XXA6 986 aa8.48□□□□□ -1.05
TRIO-213ENST00000509354 RCSD1Q6JBY9 416 aa8.48□□□□□ -1.05
TRIO-213ENST00000509354 BLOC1S2Q6QNY1 142 aa8.48□□□□□ -1.05
TRIO-213ENST00000509354 DHX32Q7L7V1 743 aaKnown RBP8.48□□□□□ -1.05
TRIO-213ENST00000509354 DPP9Q86TI2 863 aa8.48□□□□□ -1.05
TRIO-213ENST00000509354 MB21D2Q8IYB1 491 aaPredicted RBP8.48□□□□□ -1.05
TRIO-213ENST00000509354 TRMT44Q8IYL2 757 aaKnown RBP8.48□□□□□ -1.05
TRIO-213ENST00000509354 GMCL1Q96IK5 515 aa8.48□□□□□ -1.05
TRIO-213ENST00000509354 PAWRQ96IZ0 340 aaKnown RBP8.48□□□□□ -1.05
TRIO-213ENST00000509354 MAML3Q96JK9 1138 aa8.48□□□□□ -1.05
TRIO-213ENST00000509354 MMP19Q99542 508 aa8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms