RNA–Protein interactions for RNA: ENST00000509258.5

RNF4-212, Transcript of ring finger protein 4, humanhuman

TSL 1 (best) BASIC

Gene RNF4, Length 893 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-212ENST00000509258 TNFAIP2Q03169 654 aa12.82□□□□□ -0.36
RNF4-212ENST00000509258 SLC30A10Q6XR72 485 aa12.82□□□□□ -0.36
RNF4-212ENST00000509258 NOL8Q76FK4 1167 aaKnown RBP12.82□□□□□ -0.36
RNF4-212ENST00000509258 CYB5R4Q7L1T6 521 aa12.82□□□□□ -0.36
RNF4-212ENST00000509258 ENAHQ8N8S7 591 aaPredicted RBP12.82□□□□□ -0.36
RNF4-212ENST00000509258 TIFAQ96CG3 184 aa12.82□□□□□ -0.36
RNF4-212ENST00000509258 ZSWIM5Q9P217 1185 aa12.82□□□□□ -0.36
RNF4-212ENST00000509258 GBF1Q92538 1859 aa12.82□□□□□ -0.36
RNF4-212ENST00000509258 CABYRO75952 493 aa12.81□□□□□ -0.36
RNF4-212ENST00000509258 CSF2RAP15509 400 aa12.81□□□□□ -0.36
RNF4-212ENST00000509258 CHMLP26374 656 aa12.81□□□□□ -0.36
RNF4-212ENST00000509258 BAATQ14032 418 aaPredicted RBP12.81□□□□□ -0.36
RNF4-212ENST00000509258 COL9A3Q14050 684 aaPredicted RBP12.81□□□□□ -0.36
RNF4-212ENST00000509258 GRIN2CQ14957 1233 aa12.81□□□□□ -0.36
RNF4-212ENST00000509258 NSMFQ6X4W1 530 aa12.81□□□□□ -0.36
RNF4-212ENST00000509258 TLK2Q86UE8 772 aa12.81□□□□□ -0.36
RNF4-212ENST00000509258 FBXO16Q8IX29 292 aaPredicted RBP12.81□□□□□ -0.36
RNF4-212ENST00000509258 PPP1R12CQ9BZL4 782 aa12.81□□□□□ -0.36
RNF4-212ENST00000509258 UBA5Q9GZZ9 404 aa12.81□□□□□ -0.36
RNF4-212ENST00000509258 ZNF576Q9H609 170 aa12.81□□□□□ -0.36
RNF4-212ENST00000509258 SENP2Q9HC62 589 aa12.81□□□□□ -0.36
RNF4-212ENST00000509258 SCN5AQ14524 2016 aa12.81□□□□□ -0.36
RNF4-212ENST00000509258 DOCK5Q9H7D0 1870 aa12.8□□□□□ -0.36
RNF4-212ENST00000509258 SCN10AQ9Y5Y9 1956 aa12.8□□□□□ -0.36
RNF4-212ENST00000509258 ZEB2O60315 1214 aa12.8□□□□□ -0.36
RNF4-212ENST00000509258 PCP11498 1178 aaKnown RBP12.8□□□□□ -0.36
RNF4-212ENST00000509258 MFAP1P55081 439 aaKnown RBP12.8□□□□□ -0.36
RNF4-212ENST00000509258 BEX3Q00994 111 aa12.8□□□□□ -0.36
RNF4-212ENST00000509258 FSCN1Q16658 493 aaKnown RBP12.8□□□□□ -0.36
RNF4-212ENST00000509258 SLC35G1Q2M3R5 365 aa12.8□□□□□ -0.36
RNF4-212ENST00000509258 TMEM240Q5SV17 173 aa12.8□□□□□ -0.36
RNF4-212ENST00000509258 RASIP1Q5U651 963 aa12.8□□□□□ -0.36
RNF4-212ENST00000509258 TAPT1Q6NXT6 567 aa12.8□□□□□ -0.36
RNF4-212ENST00000509258 STOX1Q6ZVD7 989 aa12.8□□□□□ -0.36
RNF4-212ENST00000509258 EEPD1Q7L9B9 569 aa12.8□□□□□ -0.36
RNF4-212ENST00000509258 ANKS1AQ92625 1134 aa12.8□□□□□ -0.36
RNF4-212ENST00000509258 ESR2Q92731 530 aa12.8□□□□□ -0.36
RNF4-212ENST00000509258 SYMPKQ92797 1274 aaKnown RBP12.8□□□□□ -0.36
RNF4-212ENST00000509258 TTC14Q96N46 770 aa12.8□□□□□ -0.36
RNF4-212ENST00000509258 SEZ6LQ9BYH1 1024 aa12.8□□□□□ -0.36
RNF4-212ENST00000509258 AP5M1Q9H0R1 490 aa12.8□□□□□ -0.36
RNF4-212ENST00000509258 MTIF3Q9H2K0 278 aaKnown RBP12.8□□□□□ -0.36
RNF4-212ENST00000509258 PNMA2Q9UL42 364 aa12.8□□□□□ -0.36
RNF4-212ENST00000509258 GNEQ9Y223 722 aaKnown RBP12.8□□□□□ -0.36
RNF4-212ENST00000509258 MYO9BQ13459 2157 aa12.79□□□□□ -0.36
RNF4-212ENST00000509258 RBAK-RBAKDNI3L0D1 243 aa12.79□□□□□ -0.36
RNF4-212ENST00000509258 HIP1O00291 1037 aa12.79□□□□□ -0.36
RNF4-212ENST00000509258 CD4P01730 458 aa12.79□□□□□ -0.36
RNF4-212ENST00000509258 SMPD1P17405 629 aa12.79□□□□□ -0.36
RNF4-212ENST00000509258 SEC23AQ15436 765 aa12.79□□□□□ -0.36
RNF4-212ENST00000509258 CXCL17Q6UXB2 119 aa12.79□□□□□ -0.36
RNF4-212ENST00000509258 C16orf59Q7L2K0 433 aa12.79□□□□□ -0.36
RNF4-212ENST00000509258 SLC43A3Q8NBI5 491 aa12.79□□□□□ -0.36
RNF4-212ENST00000509258 PNMA1Q8ND90 353 aa12.79□□□□□ -0.36
RNF4-212ENST00000509258 MORC4Q8TE76 937 aa12.79□□□□□ -0.36
RNF4-212ENST00000509258 TBC1D5Q92609 795 aa12.79□□□□□ -0.36
RNF4-212ENST00000509258 ZSCAN10Q96SZ4 725 aaPredicted RBP12.79□□□□□ -0.36
RNF4-212ENST00000509258 PBX4Q9BYU1 374 aa12.79□□□□□ -0.36
RNF4-212ENST00000509258 HIPK3Q9H422 1215 aa12.79□□□□□ -0.36
RNF4-212ENST00000509258 RNF41Q9H4P4 317 aaPredicted RBP12.79□□□□□ -0.36
RNF4-212ENST00000509258 TRIP12Q14669 1992 aaPredicted RBP12.79□□□□□ -0.36
RNF4-212ENST00000509258 TNKSO95271 1327 aa12.79□□□□□ -0.36
RNF4-212ENST00000509258 CYP21A2P08686 494 aa12.78□□□□□ -0.36
RNF4-212ENST00000509258 CYP2C18P33260 490 aa12.78□□□□□ -0.36
RNF4-212ENST00000509258 ALDH5A1P51649 535 aaPredicted RBP12.78□□□□□ -0.36
RNF4-212ENST00000509258 ZNF365Q70YC5 407 aa12.78□□□□□ -0.36
RNF4-212ENST00000509258 DGKHQ86XP1 1220 aa12.78□□□□□ -0.36
RNF4-212ENST00000509258 STAG2Q8N3U4 1231 aa12.78□□□□□ -0.36
RNF4-212ENST00000509258 GAS2L1Q99501 681 aaPredicted RBP12.78□□□□□ -0.36
RNF4-212ENST00000509258 MPHOSPH6Q99547 160 aaKnown RBP12.78□□□□□ -0.36
RNF4-212ENST00000509258 VTA1Q9NP79 307 aa12.78□□□□□ -0.36
RNF4-212ENST00000509258 IL23AQ9NPF7 189 aa12.78□□□□□ -0.36
RNF4-212ENST00000509258 COL20A1Q9P218 1284 aa12.78□□□□□ -0.36
RNF4-212ENST00000509258 Q9Y3F1 56 aa12.78□□□□□ -0.36
RNF4-212ENST00000509258 GRIN2DO15399 1336 aa12.78□□□□□ -0.36
RNF4-212ENST00000509258 ACRP10323 421 aa12.77□□□□□ -0.37
RNF4-212ENST00000509258 CALML3P27482 149 aa12.77□□□□□ -0.37
RNF4-212ENST00000509258 PBX2P40425 430 aa12.77□□□□□ -0.37
RNF4-212ENST00000509258 NT5C2P49902 561 aa12.77□□□□□ -0.37
RNF4-212ENST00000509258 ITGA7Q13683 1181 aa12.77□□□□□ -0.37
RNF4-212ENST00000509258 RAB30Q15771 203 aa12.77□□□□□ -0.37
RNF4-212ENST00000509258 IMMTQ16891 758 aaKnown RBP12.77□□□□□ -0.37
RNF4-212ENST00000509258 USH1GQ495M9 461 aa12.77□□□□□ -0.37
RNF4-212ENST00000509258 IQSEC1Q6DN90 963 aa12.77□□□□□ -0.37
RNF4-212ENST00000509258 ADGRF4Q8IZF3 695 aa12.77□□□□□ -0.37
RNF4-212ENST00000509258 USP38Q8NB14 1042 aa12.77□□□□□ -0.37
RNF4-212ENST00000509258 HERVK_113Q902F9 699 aa12.77□□□□□ -0.37
RNF4-212ENST00000509258 ADD3Q9UEY8 706 aaKnown RBP12.77□□□□□ -0.37
RNF4-212ENST00000509258 MSRAQ9UJ68 235 aa12.77□□□□□ -0.37
RNF4-212ENST00000509258 WDR19Q8NEZ3 1342 aa12.77□□□□□ -0.37
RNF4-212ENST00000509258 RAD50Q92878 1312 aa12.77□□□□□ -0.37
RNF4-212ENST00000509258 MUC3AQ02505 3323 aa12.77□□□□□ -0.37
RNF4-212ENST00000509258 TET1Q8NFU7 2136 aa12.76□□□□□ -0.37
RNF4-212ENST00000509258 LOC102724159A0A0B4J2E5 919 aa12.76□□□□□ -0.37
RNF4-212ENST00000509258 PTPDC1A2A3K4 754 aa12.76□□□□□ -0.37
RNF4-212ENST00000509258 GRXCR1A8MXD5 290 aa12.76□□□□□ -0.37
RNF4-212ENST00000509258 OPLAHO14841 1288 aa12.76□□□□□ -0.37
RNF4-212ENST00000509258 SGSM2O43147 1006 aa12.76□□□□□ -0.37
RNF4-212ENST00000509258 DYNC1LI2O43237 492 aaPredicted RBP12.76□□□□□ -0.37
RNF4-212ENST00000509258 PPP1R11O60927 126 aaPredicted RBP12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms