RNA–Protein interactions for RNA: ENST00000509101.1

CXCL1-202, Transcript of C-X-C motif chemokine ligand 1, humanhuman

TSL 3

Gene CXCL1, Length 574 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1-202ENST00000509101 CYP2C9P11712 490 aa18.96■□□□□ 0.63
CXCL1-202ENST00000509101 TFF2Q03403 129 aa18.96■□□□□ 0.63
CXCL1-202ENST00000509101 TTLL4Q14679 1199 aa18.96■□□□□ 0.63
CXCL1-202ENST00000509101 LRRFIP1Q32MZ4 808 aaKnown RBP18.96■□□□□ 0.63
CXCL1-202ENST00000509101 DIEXFQ68CQ4 756 aaKnown RBP18.96■□□□□ 0.63
CXCL1-202ENST00000509101 TRMT13Q9NUP7 481 aaKnown RBP18.96■□□□□ 0.63
CXCL1-202ENST00000509101 TSPY2A6NKD2 308 aa18.95■□□□□ 0.62
CXCL1-202ENST00000509101 NMT2O60551 498 aa18.95■□□□□ 0.62
CXCL1-202ENST00000509101 SKIV2LQ15477 1246 aaKnown RBP18.95■□□□□ 0.62
CXCL1-202ENST00000509101 CCDC96Q2M329 555 aa18.95■□□□□ 0.62
CXCL1-202ENST00000509101 RCSD1Q6JBY9 416 aa18.95■□□□□ 0.62
CXCL1-202ENST00000509101 DEFB128Q7Z7B8 93 aa18.95■□□□□ 0.62
CXCL1-202ENST00000509101 TNKSO95271 1327 aa18.95■□□□□ 0.62
CXCL1-202ENST00000509101 CA3P07451 260 aa18.94■□□□□ 0.62
CXCL1-202ENST00000509101 MYL3P08590 195 aa18.94■□□□□ 0.62
CXCL1-202ENST00000509101 DUSP28Q4G0W2 176 aa18.94■□□□□ 0.62
CXCL1-202ENST00000509101 PPP4R3BQ5MIZ7 849 aa18.94■□□□□ 0.62
CXCL1-202ENST00000509101 MORC4Q8TE76 937 aa18.94■□□□□ 0.62
CXCL1-202ENST00000509101 FSD1Q9BTV5 496 aa18.94■□□□□ 0.62
CXCL1-202ENST00000509101 IL17RBQ9NRM6 502 aa18.94■□□□□ 0.62
CXCL1-202ENST00000509101 POLR3EQ9NVU0 708 aa18.94■□□□□ 0.62
CXCL1-202ENST00000509101 DDX52Q9Y2R4 599 aaKnown RBP eCLIP18.94■□□□□ 0.62
CXCL1-202ENST00000509101 TET1Q8NFU7 2136 aa18.94■□□□□ 0.62
CXCL1-202ENST00000509101 RFXAPO00287 272 aa18.93■□□□□ 0.62
CXCL1-202ENST00000509101 ICAM1P05362 532 aa18.93■□□□□ 0.62
CXCL1-202ENST00000509101 PFKMP08237 780 aa18.93■□□□□ 0.62
CXCL1-202ENST00000509101 ALDH5A1P51649 535 aaPredicted RBP18.93■□□□□ 0.62
CXCL1-202ENST00000509101 KCNQ1P51787 676 aa18.93■□□□□ 0.62
CXCL1-202ENST00000509101 CTDSPL2Q05D32 466 aa18.93■□□□□ 0.62
CXCL1-202ENST00000509101 TMEM67Q5HYA8 995 aa18.93■□□□□ 0.62
CXCL1-202ENST00000509101 WDR11Q9BZH6 1224 aa18.93■□□□□ 0.62
CXCL1-202ENST00000509101 CERS4Q9HA82 394 aa18.93■□□□□ 0.62
CXCL1-202ENST00000509101 INCENPQ9NQS7 918 aa18.93■□□□□ 0.62
CXCL1-202ENST00000509101 RCAN3Q9UKA8 241 aa18.93■□□□□ 0.62
CXCL1-202ENST00000509101 TRIP12Q14669 1992 aaPredicted RBP18.93■□□□□ 0.62
CXCL1-202ENST00000509101 SUPT20HL2P0C7V6 817 aa18.92■□□□□ 0.62
CXCL1-202ENST00000509101 BMP1P13497 986 aa18.92■□□□□ 0.62
CXCL1-202ENST00000509101 PURAQ00577 322 aaKnown RBP18.92■□□□□ 0.62
CXCL1-202ENST00000509101 BAATQ14032 418 aaPredicted RBP18.92■□□□□ 0.62
CXCL1-202ENST00000509101 FAM47CQ5HY64 1035 aa18.92■□□□□ 0.62
CXCL1-202ENST00000509101 ZMYM1Q5SVZ6 1142 aa18.92■□□□□ 0.62
CXCL1-202ENST00000509101 OR6J1Q8NGC5 347 aa18.92■□□□□ 0.62
CXCL1-202ENST00000509101 PPP1R13LQ8WUF5 828 aa18.92■□□□□ 0.62
CXCL1-202ENST00000509101 RANBP17Q9H2T7 1088 aaKnown RBP18.92■□□□□ 0.62
CXCL1-202ENST00000509101 DCTPP1Q9H773 170 aa18.92■□□□□ 0.62
CXCL1-202ENST00000509101 ADD3Q9UEY8 706 aaKnown RBP18.92■□□□□ 0.62
CXCL1-202ENST00000509101 PTPDC1A2A3K4 754 aa18.91■□□□□ 0.62
CXCL1-202ENST00000509101 NFIBO00712 420 aa18.91■□□□□ 0.62
CXCL1-202ENST00000509101 GTPBP6O43824 516 aaPredicted RBP18.91■□□□□ 0.62
CXCL1-202ENST00000509101 SLC16A2P36021 539 aa18.91■□□□□ 0.62
CXCL1-202ENST00000509101 PLA2G5P39877 138 aa18.91■□□□□ 0.62
CXCL1-202ENST00000509101 CPT1AP50416 773 aa18.91■□□□□ 0.62
CXCL1-202ENST00000509101 AAK1Q2M2I8 961 aa18.91■□□□□ 0.62
CXCL1-202ENST00000509101 TTBK2Q6IQ55 1244 aa18.91■□□□□ 0.62
CXCL1-202ENST00000509101 SLC30A10Q6XR72 485 aa18.91■□□□□ 0.62
CXCL1-202ENST00000509101 PI4K2BQ8TCG2 481 aa18.91■□□□□ 0.62
CXCL1-202ENST00000509101 MTCH2Q9Y6C9 303 aa18.91■□□□□ 0.62
CXCL1-202ENST00000509101 TTC41PQ6P2S7 1318 aa18.91■□□□□ 0.62
CXCL1-202ENST00000509101 EPOPA6NHQ4 379 aa18.9■□□□□ 0.62
CXCL1-202ENST00000509101 FOXP2O15409 715 aa18.9■□□□□ 0.62
CXCL1-202ENST00000509101 RANBP6O60518 1105 aaKnown RBP18.9■□□□□ 0.62
CXCL1-202ENST00000509101 ACTN1P12814 892 aa18.9■□□□□ 0.62
CXCL1-202ENST00000509101 KRT40Q6A162 431 aa18.9■□□□□ 0.62
CXCL1-202ENST00000509101 DCAF4Q8WV16 495 aa18.9■□□□□ 0.62
CXCL1-202ENST00000509101 SLC9A7Q96T83 725 aa18.9■□□□□ 0.62
CXCL1-202ENST00000509101 MTG1Q9BT17 334 aaPredicted RBP18.9■□□□□ 0.62
CXCL1-202ENST00000509101 GPHNQ9NQX3 736 aaPredicted RBP18.9■□□□□ 0.62
CXCL1-202ENST00000509101 ERC2O15083 957 aa18.89■□□□□ 0.61
CXCL1-202ENST00000509101 ARHGEF15O94989 841 aa18.89■□□□□ 0.61
CXCL1-202ENST00000509101 CALML3P27482 149 aa18.89■□□□□ 0.61
CXCL1-202ENST00000509101 NBPF20Q3BBV1 942 aa18.89■□□□□ 0.61
CXCL1-202ENST00000509101 SYDE2Q5VT97 1194 aa18.89■□□□□ 0.61
CXCL1-202ENST00000509101 OTUD7AQ8TE49 926 aaPredicted RBP18.89■□□□□ 0.61
CXCL1-202ENST00000509101 FAM122AQ96E09 287 aa18.89■□□□□ 0.61
CXCL1-202ENST00000509101 FRMPD2Q68DX3 1309 aaPredicted RBP18.89■□□□□ 0.61
CXCL1-202ENST00000509101 RBM47A0AV96 593 aaKnown RBP18.88■□□□□ 0.61
CXCL1-202ENST00000509101 RFC2P35250 354 aa18.88■□□□□ 0.61
CXCL1-202ENST00000509101 PPP2R5BQ15173 497 aa18.88■□□□□ 0.61
CXCL1-202ENST00000509101 ARNTL2Q8WYA1 636 aa18.88■□□□□ 0.61
CXCL1-202ENST00000509101 RAD50Q92878 1312 aa18.88■□□□□ 0.61
CXCL1-202ENST00000509101 LOC102724159A0A0B4J2E5 919 aa18.87■□□□□ 0.61
CXCL1-202ENST00000509101 POU3F3P20264 500 aaPredicted RBP18.87■□□□□ 0.61
CXCL1-202ENST00000509101 NOVP48745 357 aa18.87■□□□□ 0.61
CXCL1-202ENST00000509101 PWP2Q15269 919 aaKnown RBP18.87■□□□□ 0.61
CXCL1-202ENST00000509101 BRDTQ58F21 947 aaPredicted RBP18.87■□□□□ 0.61
CXCL1-202ENST00000509101 KIAA1217Q5T5P2 1943 aa18.87■□□□□ 0.61
CXCL1-202ENST00000509101 BTNL9Q6UXG8 535 aa18.87■□□□□ 0.61
CXCL1-202ENST00000509101 COPS5Q92905 334 aa18.87■□□□□ 0.61
CXCL1-202ENST00000509101 C1QTNF1Q9BXJ1 281 aa18.87■□□□□ 0.61
CXCL1-202ENST00000509101 FTOQ9C0B1 505 aaKnown RBP eCLIP18.87■□□□□ 0.61
CXCL1-202ENST00000509101 GPCPD1Q9NPB8 672 aa18.87■□□□□ 0.61
CXCL1-202ENST00000509101 TOMM22Q9NS69 142 aa18.87■□□□□ 0.61
CXCL1-202ENST00000509101 BRWD1Q9NSI6 2320 aa18.86■□□□□ 0.61
CXCL1-202ENST00000509101 MYH6P13533 1939 aa18.86■□□□□ 0.61
CXCL1-202ENST00000509101 PITPNM1O00562 1244 aa18.86■□□□□ 0.61
CXCL1-202ENST00000509101 IQCF3P0C7M6 154 aa18.86■□□□□ 0.61
CXCL1-202ENST00000509101 TAP1Q03518 808 aa18.86■□□□□ 0.61
CXCL1-202ENST00000509101 PDE4DQ08499 809 aa18.86■□□□□ 0.61
CXCL1-202ENST00000509101 VPS53Q5VIR6 699 aa18.86■□□□□ 0.61
CXCL1-202ENST00000509101 NFRKBQ6P4R8 1299 aa18.86■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms