RNA–Protein interactions for RNA: ENST00000509092.5

PDGFRA-207, Transcript of platelet derived growth factor receptor alpha, humanhuman

TSL 1 (best)

Gene PDGFRA, Length 2,417 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-207ENST00000509092 VPS16Q9H269 839 aa11.06□□□□□ -0.64
PDGFRA-207ENST00000509092 EPB41L5Q9HCM4 733 aa11.06□□□□□ -0.64
PDGFRA-207ENST00000509092 CNOT8Q9UFF9 292 aaKnown RBP11.06□□□□□ -0.64
PDGFRA-207ENST00000509092 HPS5Q9UPZ3 1129 aa11.06□□□□□ -0.64
PDGFRA-207ENST00000509092 LUC7L2Q9Y383 392 aaKnown RBP11.06□□□□□ -0.64
PDGFRA-207ENST00000509092 MACROD2A1Z1Q3 448 aa11.06□□□□□ -0.64
PDGFRA-207ENST00000509092 ASAP2O43150 1006 aa11.06□□□□□ -0.64
PDGFRA-207ENST00000509092 KCNA6P17658 529 aa11.06□□□□□ -0.64
PDGFRA-207ENST00000509092 KIF5AQ12840 1032 aa11.06□□□□□ -0.64
PDGFRA-207ENST00000509092 MEA1Q16626 185 aa11.06□□□□□ -0.64
PDGFRA-207ENST00000509092 MAIP1Q8WWC4 291 aa11.06□□□□□ -0.64
PDGFRA-207ENST00000509092 IFT81Q8WYA0 676 aa11.06□□□□□ -0.64
PDGFRA-207ENST00000509092 CENPTQ96BT3 561 aa11.06□□□□□ -0.64
PDGFRA-207ENST00000509092 SLX1AQ9BQ83 275 aa11.06□□□□□ -0.64
PDGFRA-207ENST00000509092 RBM12Q9NTZ6 932 aaKnown RBP11.06□□□□□ -0.64
PDGFRA-207ENST00000509092 BABAM1Q9NWV8 329 aa11.06□□□□□ -0.64
PDGFRA-207ENST00000509092 KLF18A0A0U1RQI7 1052 aa11.05□□□□□ -0.64
PDGFRA-207ENST00000509092 PI4KAP2A4QPH2 592 aa11.05□□□□□ -0.64
PDGFRA-207ENST00000509092 PPP1R3GB7ZBB8 358 aa11.05□□□□□ -0.64
PDGFRA-207ENST00000509092 CYP27B1O15528 508 aa11.05□□□□□ -0.64
PDGFRA-207ENST00000509092 WFS1O76024 890 aa11.05□□□□□ -0.64
PDGFRA-207ENST00000509092 MYBL1P10243 752 aa11.05□□□□□ -0.64
PDGFRA-207ENST00000509092 ALDH1B1P30837 517 aa11.05□□□□□ -0.64
PDGFRA-207ENST00000509092 TUBP50607 506 aa11.05□□□□□ -0.64
PDGFRA-207ENST00000509092 SCNN1BP51168 640 aa11.05□□□□□ -0.64
PDGFRA-207ENST00000509092 KCNJ2P63252 427 aa11.05□□□□□ -0.64
PDGFRA-207ENST00000509092 GUCY2DQ02846 1103 aa11.05□□□□□ -0.64
PDGFRA-207ENST00000509092 ODF2Q5BJF6 829 aa11.05□□□□□ -0.64
PDGFRA-207ENST00000509092 KRT40Q6A162 431 aa11.05□□□□□ -0.64
PDGFRA-207ENST00000509092 DPY19L2Q6NUT2 758 aa11.05□□□□□ -0.64
PDGFRA-207ENST00000509092 TRPM8Q7Z2W7 1104 aa11.05□□□□□ -0.64
PDGFRA-207ENST00000509092 STK11IPQ8N1F8 1099 aa11.05□□□□□ -0.64
PDGFRA-207ENST00000509092 CCDC155Q8N6L0 562 aa11.05□□□□□ -0.64
PDGFRA-207ENST00000509092 PI4KAP1Q8N8J0 262 aa11.05□□□□□ -0.64
PDGFRA-207ENST00000509092 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP11.05□□□□□ -0.647e-9■■■■■ 72.6
PDGFRA-207ENST00000509092 PRCCQ92733 491 aaPredicted RBP11.05□□□□□ -0.64
PDGFRA-207ENST00000509092 TRAPPC9Q96Q05 1148 aa11.05□□□□□ -0.64
PDGFRA-207ENST00000509092 ALG1Q9BT22 464 aa11.05□□□□□ -0.64
PDGFRA-207ENST00000509092 UBE2OQ9C0C9 1292 aaKnown RBP11.05□□□□□ -0.64
PDGFRA-207ENST00000509092 CNOT10Q9H9A5 744 aaKnown RBP11.05□□□□□ -0.64
PDGFRA-207ENST00000509092 TAB2Q9NYJ8 693 aa11.05□□□□□ -0.64
PDGFRA-207ENST00000509092 IQSEC3Q9UPP2 1182 aaPredicted RBP11.05□□□□□ -0.64
PDGFRA-207ENST00000509092 LRRC42Q9Y546 428 aa11.05□□□□□ -0.64
PDGFRA-207ENST00000509092 H0YGN5 161 aa11.05□□□□□ -0.64
PDGFRA-207ENST00000509092 FLOT1O75955 427 aa11.05□□□□□ -0.64
PDGFRA-207ENST00000509092 PTPREP23469 700 aa11.05□□□□□ -0.64
PDGFRA-207ENST00000509092 PSMC4P43686 418 aa11.05□□□□□ -0.64
PDGFRA-207ENST00000509092 PIP4K2AP48426 406 aaPredicted RBP11.05□□□□□ -0.64
PDGFRA-207ENST00000509092 NCALDP61601 193 aa11.05□□□□□ -0.64
PDGFRA-207ENST00000509092 PIGWQ7Z7B1 504 aa11.05□□□□□ -0.64
PDGFRA-207ENST00000509092 ZNF579Q8NAF0 562 aaKnown RBP11.05□□□□□ -0.64
PDGFRA-207ENST00000509092 CASKIN2Q8WXE0 1202 aa11.05□□□□□ -0.64
PDGFRA-207ENST00000509092 KIFAP3Q92845 792 aa11.05□□□□□ -0.64
PDGFRA-207ENST00000509092 FAM129AQ9BZQ8 928 aa11.05□□□□□ -0.64
PDGFRA-207ENST00000509092 ARHGEF10LQ9HCE6 1279 aa11.05□□□□□ -0.64
PDGFRA-207ENST00000509092 SDAD1Q9NVU7 687 aaKnown RBP eCLIP11.05□□□□□ -0.64
PDGFRA-207ENST00000509092 FBXO2Q9UK22 296 aaPredicted RBP11.05□□□□□ -0.64
PDGFRA-207ENST00000509092 CAPN11Q9UMQ6 739 aa11.05□□□□□ -0.64
PDGFRA-207ENST00000509092 AGAP1Q9UPQ3 857 aa11.05□□□□□ -0.64
PDGFRA-207ENST00000509092 NFS1Q9Y697 457 aa11.05□□□□□ -0.64
PDGFRA-207ENST00000509092 DUSP10Q9Y6W6 482 aa11.05□□□□□ -0.64
PDGFRA-207ENST00000509092 MYH2Q9UKX2 1941 aa11.04□□□□□ -0.64
PDGFRA-207ENST00000509092 EIF4E1BA6NMX2 242 aaKnown RBP11.04□□□□□ -0.64
PDGFRA-207ENST00000509092 ZNF131P52739 623 aa11.04□□□□□ -0.64
PDGFRA-207ENST00000509092 LACTBP83111 547 aaPredicted RBP11.04□□□□□ -0.64
PDGFRA-207ENST00000509092 ATP11AP98196 1134 aa11.04□□□□□ -0.64
PDGFRA-207ENST00000509092 ZNF844Q08AG5 666 aa11.04□□□□□ -0.64
PDGFRA-207ENST00000509092 FAM133BQ5BKY9 247 aaKnown RBP11.04□□□□□ -0.64
PDGFRA-207ENST00000509092 TCP11X2Q5H9J9 407 aa11.04□□□□□ -0.64
PDGFRA-207ENST00000509092 ERMARDQ5T6L9 678 aa11.04□□□□□ -0.64
PDGFRA-207ENST00000509092 TRIM68Q6AZZ1 485 aa11.04□□□□□ -0.64
PDGFRA-207ENST00000509092 NFRKBQ6P4R8 1299 aa11.04□□□□□ -0.64
PDGFRA-207ENST00000509092 CCDC97Q96F63 343 aaPredicted RBP11.04□□□□□ -0.64
PDGFRA-207ENST00000509092 XPO6Q96QU8 1125 aaKnown RBP11.04□□□□□ -0.64
PDGFRA-207ENST00000509092 SYT15Q9BQS2 421 aa11.04□□□□□ -0.64
PDGFRA-207ENST00000509092 GPHNQ9NQX3 736 aaPredicted RBP11.04□□□□□ -0.64
PDGFRA-207ENST00000509092 SMARCAL1Q9NZC9 954 aa11.04□□□□□ -0.64
PDGFRA-207ENST00000509092 ADAM22Q9P0K1 906 aa11.04□□□□□ -0.64
PDGFRA-207ENST00000509092 CTNND2Q9UQB3 1225 aa11.04□□□□□ -0.64
PDGFRA-207ENST00000509092 MAP3K19Q56UN5 1328 aa11.04□□□□□ -0.64
PDGFRA-207ENST00000509092 NALCNQ8IZF0 1738 aa11.04□□□□□ -0.64
PDGFRA-207ENST00000509092 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.04□□□□□ -0.64
PDGFRA-207ENST00000509092 PENKP01210 267 aaPredicted RBP11.04□□□□□ -0.64
PDGFRA-207ENST00000509092 OATP04181 439 aa11.04□□□□□ -0.64
PDGFRA-207ENST00000509092 SP100P23497 879 aaPredicted RBP11.04□□□□□ -0.64
PDGFRA-207ENST00000509092 UBXN1Q04323 297 aa11.04□□□□□ -0.64
PDGFRA-207ENST00000509092 PABPC1LQ4VXU2 614 aaKnown RBP11.04□□□□□ -0.64
PDGFRA-207ENST00000509092 DNAJC14Q6Y2X3 702 aaPredicted RBP11.04□□□□□ -0.64
PDGFRA-207ENST00000509092 EIF1ADQ8N9N8 165 aaKnown RBP11.04□□□□□ -0.64
PDGFRA-207ENST00000509092 TMEM165Q9HC07 324 aa11.04□□□□□ -0.64
PDGFRA-207ENST00000509092 C9orf78Q9NZ63 289 aaPredicted RBP11.04□□□□□ -0.64
PDGFRA-207ENST00000509092 RNF14Q9UBS8 474 aa11.04□□□□□ -0.64
PDGFRA-207ENST00000509092 A0A1W2PQC6 194 aa11.03□□□□□ -0.64
PDGFRA-207ENST00000509092 ESYT3A0FGR9 886 aa11.03□□□□□ -0.64
PDGFRA-207ENST00000509092 KCNJ18B7U540 433 aa11.03□□□□□ -0.64
PDGFRA-207ENST00000509092 E7ENQ6 273 aa11.03□□□□□ -0.64
PDGFRA-207ENST00000509092 IGF2BP3O00425 579 aaKnown RBP eCLIP11.03□□□□□ -0.64
PDGFRA-207ENST00000509092 USO1O60763 962 aaKnown RBP11.03□□□□□ -0.64
PDGFRA-207ENST00000509092 CHGBP05060 677 aa11.03□□□□□ -0.64
PDGFRA-207ENST00000509092 RARAP10276 462 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms