RNA–Protein interactions for RNA: ENST00000508902.5

CLDND1-220, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 916 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-220ENST00000508902 RPS6KB1P23443 525 aa21.11■□□□□ 0.97
CLDND1-220ENST00000508902 GJC2Q5T442 439 aaPredicted RBP21.11■□□□□ 0.97
CLDND1-220ENST00000508902 TAPT1Q6NXT6 567 aa21.11■□□□□ 0.97
CLDND1-220ENST00000508902 TMTC2Q8N394 836 aa21.11■□□□□ 0.97
CLDND1-220ENST00000508902 RGS22Q8NE09 1264 aa21.11■□□□□ 0.97
CLDND1-220ENST00000508902 AMNQ9BXJ7 453 aa21.11■□□□□ 0.97
CLDND1-220ENST00000508902 AGXT2Q9BYV1 514 aa21.11■□□□□ 0.97
CLDND1-220ENST00000508902 SLC12A7Q9Y666 1083 aa21.11■□□□□ 0.97
CLDND1-220ENST00000508902 KIAA1217Q5T5P2 1943 aa21.11■□□□□ 0.97
CLDND1-220ENST00000508902 CNTNAP5Q8WYK1 1306 aa21.1■□□□□ 0.97
CLDND1-220ENST00000508902 CTAGE5O15320 804 aa21.1■□□□□ 0.97
CLDND1-220ENST00000508902 PGK1P00558 417 aa21.1■□□□□ 0.97
CLDND1-220ENST00000508902 AKR1A1P14550 325 aa21.1■□□□□ 0.97
CLDND1-220ENST00000508902 APOBRQ0VD83 1088 aa21.1■□□□□ 0.97
CLDND1-220ENST00000508902 LRRC41Q15345 812 aa21.1■□□□□ 0.97
CLDND1-220ENST00000508902 CCDC144BQ3MJ40 725 aa21.1■□□□□ 0.97
CLDND1-220ENST00000508902 Q6ZUG5 572 aa21.1■□□□□ 0.97
CLDND1-220ENST00000508902 EEPD1Q7L9B9 569 aa21.1■□□□□ 0.97
CLDND1-220ENST00000508902 FANCBQ8NB91 859 aa21.1■□□□□ 0.97
CLDND1-220ENST00000508902 CTCFLQ8NI51 663 aaPredicted RBP21.1■□□□□ 0.97
CLDND1-220ENST00000508902 TAAR1Q96RJ0 339 aa21.1■□□□□ 0.97
CLDND1-220ENST00000508902 ABHD16BQ9H3Z7 469 aa21.1■□□□□ 0.97
CLDND1-220ENST00000508902 PNMA2Q9UL42 364 aa21.1■□□□□ 0.97
CLDND1-220ENST00000508902 CNPY2Q9Y2B0 182 aa21.1■□□□□ 0.97
CLDND1-220ENST00000508902 SYNRGQ9UMZ2 1314 aa21.09■□□□□ 0.97
CLDND1-220ENST00000508902 PNMA6FA0A0J9YX94 578 aa21.09■□□□□ 0.97
CLDND1-220ENST00000508902 KLF18A0A0U1RQI7 1052 aa21.09■□□□□ 0.97
CLDND1-220ENST00000508902 CASTP20810 708 aaKnown RBP21.09■□□□□ 0.97
CLDND1-220ENST00000508902 CDC27P30260 824 aa21.09■□□□□ 0.97
CLDND1-220ENST00000508902 HSD17B4P51659 736 aa21.09■□□□□ 0.97
CLDND1-220ENST00000508902 BLOC1S2Q6QNY1 142 aa21.09■□□□□ 0.97
CLDND1-220ENST00000508902 NECAB2Q7Z6G3 386 aa21.09■□□□□ 0.97
CLDND1-220ENST00000508902 C11orf49Q9H6J7 331 aa21.09■□□□□ 0.97
CLDND1-220ENST00000508902 PCDHA1Q9Y5I3 950 aa21.09■□□□□ 0.97
CLDND1-220ENST00000508902 NID2Q14112 1375 aa21.09■□□□□ 0.97
CLDND1-220ENST00000508902 CAPN2P17655 700 aa21.08■□□□□ 0.97
CLDND1-220ENST00000508902 ADCYAP1R1P41586 468 aa21.08■□□□□ 0.97
CLDND1-220ENST00000508902 TOB2Q14106 344 aaPredicted RBP21.08■□□□□ 0.97
CLDND1-220ENST00000508902 FBXL16Q8N461 479 aa21.08■□□□□ 0.97
CLDND1-220ENST00000508902 BRF1Q92994 677 aa21.08■□□□□ 0.97
CLDND1-220ENST00000508902 ZSWIM6Q9HCJ5 1215 aa21.08■□□□□ 0.97
CLDND1-220ENST00000508902 XPNPEP3Q9NQH7 507 aa21.08■□□□□ 0.97
CLDND1-220ENST00000508902 MRPL11Q9Y3B7 192 aaKnown RBP21.08■□□□□ 0.97
CLDND1-220ENST00000508902 ASB14A6NK59 587 aa21.07■□□□□ 0.96
CLDND1-220ENST00000508902 DNM1LO00429 736 aa21.07■□□□□ 0.96
CLDND1-220ENST00000508902 HMGB1P09429 215 aaKnown RBP21.07■□□□□ 0.96
CLDND1-220ENST00000508902 SMARCA1P28370 1054 aa21.07■□□□□ 0.96
CLDND1-220ENST00000508902 KIF5BP33176 963 aa21.07■□□□□ 0.96
CLDND1-220ENST00000508902 LRRC26Q2I0M4 334 aa21.07■□□□□ 0.96
CLDND1-220ENST00000508902 C8orf34Q49A92 452 aa21.07■□□□□ 0.96
CLDND1-220ENST00000508902 CCSAPQ6IQ19 270 aaPredicted RBP21.07■□□□□ 0.96
CLDND1-220ENST00000508902 CCDC82Q8N4S0 544 aa21.07■□□□□ 0.96
CLDND1-220ENST00000508902 KLHDC9Q8NEP7 349 aa21.07■□□□□ 0.96
CLDND1-220ENST00000508902 UPF3BQ9BZI7 483 aaKnown RBP21.07■□□□□ 0.96
CLDND1-220ENST00000508902 FAM184BQ9ULE4 1060 aa21.07■□□□□ 0.96
CLDND1-220ENST00000508902 GNEQ9Y223 722 aaKnown RBP21.07■□□□□ 0.96
CLDND1-220ENST00000508902 ZBTB43O43298 467 aa21.06■□□□□ 0.96
CLDND1-220ENST00000508902 CALM1P0DP23 149 aa21.06■□□□□ 0.96
CLDND1-220ENST00000508902 CALM2P0DP24 149 aa21.06■□□□□ 0.96
CLDND1-220ENST00000508902 CALM3P0DP25 149 aa21.06■□□□□ 0.96
CLDND1-220ENST00000508902 RARBP10826 455 aa21.06■□□□□ 0.96
CLDND1-220ENST00000508902 SMPD1P17405 629 aa21.06■□□□□ 0.96
CLDND1-220ENST00000508902 HOXA13P31271 388 aaPredicted RBP21.06■□□□□ 0.96
CLDND1-220ENST00000508902 TYW1BQ6NUM6 668 aa21.06■□□□□ 0.96
CLDND1-220ENST00000508902 IL31RAQ8NI17 732 aa21.06■□□□□ 0.96
CLDND1-220ENST00000508902 UPF3AQ9H1J1 476 aaKnown RBP21.06■□□□□ 0.96
CLDND1-220ENST00000508902 GOLGA8AA7E2F4 631 aa21.05■□□□□ 0.96
CLDND1-220ENST00000508902 GOLGA8BA8MQT2 603 aa21.05■□□□□ 0.96
CLDND1-220ENST00000508902 CFBP00751 764 aa21.05■□□□□ 0.96
CLDND1-220ENST00000508902 RTN1Q16799 776 aa21.05■□□□□ 0.96
CLDND1-220ENST00000508902 DNERQ8NFT8 737 aa21.05■□□□□ 0.96
CLDND1-220ENST00000508902 RBM47A0AV96 593 aaKnown RBP21.04■□□□□ 0.96
CLDND1-220ENST00000508902 DUSP11O75319 330 aaKnown RBP21.04■□□□□ 0.96
CLDND1-220ENST00000508902 ARIH2O95376 493 aa21.04■□□□□ 0.96
CLDND1-220ENST00000508902 ADD1P35611 737 aaKnown RBP21.04■□□□□ 0.96
CLDND1-220ENST00000508902 GNAQP50148 359 aa21.04■□□□□ 0.96
CLDND1-220ENST00000508902 PRPF38BQ5VTL8 546 aaKnown RBP21.04■□□□□ 0.96
CLDND1-220ENST00000508902 RUFY3Q7L099 469 aa21.04■□□□□ 0.96
CLDND1-220ENST00000508902 IL17RAQ96F46 866 aa21.04■□□□□ 0.96
CLDND1-220ENST00000508902 LZTS2Q9BRK4 669 aa21.04■□□□□ 0.96
CLDND1-220ENST00000508902 LARP6Q9BRS8 491 aaKnown RBP21.04■□□□□ 0.96
CLDND1-220ENST00000508902 TM6SF1Q9BZW5 370 aa21.04■□□□□ 0.96
CLDND1-220ENST00000508902 VTA1Q9NP79 307 aa21.04■□□□□ 0.96
CLDND1-220ENST00000508902 ADD3Q9UEY8 706 aaKnown RBP21.04■□□□□ 0.96
CLDND1-220ENST00000508902 LOC102724159A0A0B4J2E5 919 aa21.03■□□□□ 0.96
CLDND1-220ENST00000508902 H0YGN5 161 aa21.03■□□□□ 0.96
CLDND1-220ENST00000508902 EIF2AK2P19525 551 aaKnown RBP21.03■□□□□ 0.96
CLDND1-220ENST00000508902 EVCP57679 992 aa21.03■□□□□ 0.96
CLDND1-220ENST00000508902 GJA9P57773 515 aa21.03■□□□□ 0.96
CLDND1-220ENST00000508902 NKX3-2P78367 333 aa21.03■□□□□ 0.96
CLDND1-220ENST00000508902 PWP2Q15269 919 aaKnown RBP21.03■□□□□ 0.96
CLDND1-220ENST00000508902 MCF2L2Q86YR7 1114 aa21.03■□□□□ 0.96
CLDND1-220ENST00000508902 GPKOWQ92917 476 aaPredicted RBP eCLIP21.03■□□□□ 0.96
CLDND1-220ENST00000508902 RRP36Q96EU6 259 aaKnown RBP21.03■□□□□ 0.96
CLDND1-220ENST00000508902 SENP6Q9GZR1 1112 aaPredicted RBP21.03■□□□□ 0.96
CLDND1-220ENST00000508902 MAF1Q9H063 256 aa21.03■□□□□ 0.96
CLDND1-220ENST00000508902 PXMP2Q9NR77 195 aa21.03■□□□□ 0.96
CLDND1-220ENST00000508902 PHF24Q9UPV7 400 aa21.03■□□□□ 0.96
CLDND1-220ENST00000508902 MYCNP04198 464 aaPredicted RBP21.02■□□□□ 0.96
CLDND1-220ENST00000508902 CST5P28325 142 aaPredicted RBP21.02■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms