RNA–Protein interactions for RNA: ENST00000508740.5

NR1I3-226, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 977 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-226ENST00000508740 BTNL9Q6UXG8 535 aa9.04□□□□□ -0.96
NR1I3-226ENST00000508740 C11orf57Q6ZUT1 292 aaPredicted RBP9.04□□□□□ -0.96
NR1I3-226ENST00000508740 MIGA2Q7L4E1 593 aa9.04□□□□□ -0.96
NR1I3-226ENST00000508740 REXO1Q8N1G1 1221 aaKnown RBP9.04□□□□□ -0.96
NR1I3-226ENST00000508740 SYMPKQ92797 1274 aaKnown RBP9.04□□□□□ -0.96
NR1I3-226ENST00000508740 EPSTI1Q96J88 318 aa9.04□□□□□ -0.96
NR1I3-226ENST00000508740 NAT10Q9H0A0 1025 aaKnown RBP9.04□□□□□ -0.96
NR1I3-226ENST00000508740 GLT8D2Q9H1C3 349 aa9.04□□□□□ -0.96
NR1I3-226ENST00000508740 ARHGEF10LQ9HCE6 1279 aa9.04□□□□□ -0.96
NR1I3-226ENST00000508740 RIC8AQ9NPQ8 531 aa9.04□□□□□ -0.96
NR1I3-226ENST00000508740 BIN2Q9UBW5 565 aaPredicted RBP9.04□□□□□ -0.96
NR1I3-226ENST00000508740 USP25Q9UHP3 1055 aa9.04□□□□□ -0.96
NR1I3-226ENST00000508740 SERTAD1Q9UHV2 236 aa9.04□□□□□ -0.96
NR1I3-226ENST00000508740 CNOT7Q9UIV1 285 aaKnown RBP9.04□□□□□ -0.96
NR1I3-226ENST00000508740 ZBTB21Q9ULJ3 1066 aa9.04□□□□□ -0.96
NR1I3-226ENST00000508740 GJA3Q9Y6H8 435 aa9.04□□□□□ -0.96
NR1I3-226ENST00000508740 MYH6P13533 1939 aa9.03□□□□□ -0.96
NR1I3-226ENST00000508740 SIPA1L1O43166 1804 aa9.03□□□□□ -0.96
NR1I3-226ENST00000508740 TMEM232C9JQI7 657 aa9.03□□□□□ -0.96
NR1I3-226ENST00000508740 LAD1O00515 517 aa9.03□□□□□ -0.96
NR1I3-226ENST00000508740 AP5Z1O43299 807 aa9.03□□□□□ -0.96
NR1I3-226ENST00000508740 CA12O43570 354 aa9.03□□□□□ -0.96
NR1I3-226ENST00000508740 ACTN4O43707 911 aaKnown RBP9.03□□□□□ -0.96
NR1I3-226ENST00000508740 EVI5O60447 810 aa9.03□□□□□ -0.96
NR1I3-226ENST00000508740 DDNO94850 711 aaPredicted RBP9.03□□□□□ -0.96
NR1I3-226ENST00000508740 EGFRP00533 1210 aa9.03□□□□□ -0.96
NR1I3-226ENST00000508740 LONP1P36776 959 aaKnown RBP9.03□□□□□ -0.96
NR1I3-226ENST00000508740 CAP2P40123 477 aa9.03□□□□□ -0.96
NR1I3-226ENST00000508740 VEGFBP49765 207 aa9.03□□□□□ -0.96
NR1I3-226ENST00000508740 ORC2Q13416 577 aaPredicted RBP9.03□□□□□ -0.96
NR1I3-226ENST00000508740 PNOCQ13519 176 aa9.03□□□□□ -0.96
NR1I3-226ENST00000508740 TNFAIP1Q13829 316 aa9.03□□□□□ -0.96
NR1I3-226ENST00000508740 QRICH1Q2TAL8 776 aa9.03□□□□□ -0.96
NR1I3-226ENST00000508740 DEFB115Q30KQ5 88 aa9.03□□□□□ -0.96
NR1I3-226ENST00000508740 SYDE2Q5VT97 1194 aa9.03□□□□□ -0.96
NR1I3-226ENST00000508740 DTHD1Q6ZMT9 781 aa9.03□□□□□ -0.96
NR1I3-226ENST00000508740 SAMD7Q7Z3H4 446 aa9.03□□□□□ -0.96
NR1I3-226ENST00000508740 NEK8Q86SG6 692 aa9.03□□□□□ -0.96
NR1I3-226ENST00000508740 CEP57L1Q8IYX8 460 aa9.03□□□□□ -0.96
NR1I3-226ENST00000508740 ACER1Q8TDN7 264 aa9.03□□□□□ -0.96
NR1I3-226ENST00000508740 TBCKQ8TEA7 893 aa9.03□□□□□ -0.96
NR1I3-226ENST00000508740 PTCD2Q8WV60 388 aaKnown RBP9.03□□□□□ -0.96
NR1I3-226ENST00000508740 CUL5Q93034 780 aa9.03□□□□□ -0.96
NR1I3-226ENST00000508740 CCDC34Q96HJ3 373 aa9.03□□□□□ -0.96
NR1I3-226ENST00000508740 ABHD8Q96I13 439 aa9.03□□□□□ -0.96
NR1I3-226ENST00000508740 NUP88Q99567 741 aaPredicted RBP9.03□□□□□ -0.96
NR1I3-226ENST00000508740 BPIFA3Q9BQP9 254 aa9.03□□□□□ -0.96
NR1I3-226ENST00000508740 PYM1Q9BRP8 204 aaKnown RBP9.03□□□□□ -0.96
NR1I3-226ENST00000508740 TMEM60Q9H2L4 133 aa9.03□□□□□ -0.96
NR1I3-226ENST00000508740 HACL1Q9UJ83 578 aa9.03□□□□□ -0.96
NR1I3-226ENST00000508740 TMX2Q9Y320 296 aa9.03□□□□□ -0.96
NR1I3-226ENST00000508740 GREB1LQ9C091 1923 aaPredicted RBP9.03□□□□□ -0.96
NR1I3-226ENST00000508740 A0A087X0B3 334 aa9.02□□□□□ -0.97
NR1I3-226ENST00000508740 PHF20L1A8MW92 1017 aa9.02□□□□□ -0.97
NR1I3-226ENST00000508740 BECN2A8MW95 431 aa9.02□□□□□ -0.97
NR1I3-226ENST00000508740 GOLGA6L19H0YKK7 550 aa9.02□□□□□ -0.97
NR1I3-226ENST00000508740 BIN1O00499 593 aa9.02□□□□□ -0.97
NR1I3-226ENST00000508740 CCNT1O60563 726 aaKnown RBP9.02□□□□□ -0.97
NR1I3-226ENST00000508740 ITGBL1O95965 494 aaPredicted RBP9.02□□□□□ -0.97
NR1I3-226ENST00000508740 SLFN14P0C7P3 912 aa9.02□□□□□ -0.97
NR1I3-226ENST00000508740 PRPHP41219 470 aa9.02□□□□□ -0.97
NR1I3-226ENST00000508740 SARSP49591 514 aaKnown RBP9.02□□□□□ -0.97
NR1I3-226ENST00000508740 CLK2P49760 499 aaKnown RBP9.02□□□□□ -0.97
NR1I3-226ENST00000508740 RGS19P49795 217 aa9.02□□□□□ -0.97
NR1I3-226ENST00000508740 LBX1P52954 281 aa9.02□□□□□ -0.97
NR1I3-226ENST00000508740 MLLT1Q03111 559 aaPredicted RBP9.02□□□□□ -0.97
NR1I3-226ENST00000508740 POSTNQ15063 836 aa9.02□□□□□ -0.97
NR1I3-226ENST00000508740 CDC37Q16543 378 aaPredicted RBP9.02□□□□□ -0.97
NR1I3-226ENST00000508740 LETM2Q2VYF4 491 aa9.02□□□□□ -0.97
NR1I3-226ENST00000508740 TBC1D10BQ4KMP7 808 aaPredicted RBP9.02□□□□□ -0.97
NR1I3-226ENST00000508740 NT5DC1Q5TFE4 455 aa9.02□□□□□ -0.97
NR1I3-226ENST00000508740 SH3RF1Q7Z6J0 888 aa9.02□□□□□ -0.97
NR1I3-226ENST00000508740 DHX40Q8IX18 779 aaKnown RBP9.02□□□□□ -0.97
NR1I3-226ENST00000508740 PDILTQ8N807 584 aa9.02□□□□□ -0.97
NR1I3-226ENST00000508740 DDX12PQ92771 950 aa9.02□□□□□ -0.97
NR1I3-226ENST00000508740 DHX58Q96C10 678 aa9.02□□□□□ -0.97
NR1I3-226ENST00000508740 PAGE5Q96GU1 130 aa9.02□□□□□ -0.97
NR1I3-226ENST00000508740 TEPSINQ96N21 525 aa9.02□□□□□ -0.97
NR1I3-226ENST00000508740 PSTPIP2Q9H939 334 aa9.02□□□□□ -0.97
NR1I3-226ENST00000508740 GOPCQ9HD26 462 aa9.02□□□□□ -0.97
NR1I3-226ENST00000508740 TMEM260Q9NX78 707 aa9.02□□□□□ -0.97
NR1I3-226ENST00000508740 PCDHA5Q9Y5H7 936 aa9.02□□□□□ -0.97
NR1I3-226ENST00000508740 PCDHA1Q9Y5I3 950 aa9.02□□□□□ -0.97
NR1I3-226ENST00000508740 ZNF541Q9H0D2 1346 aa9.02□□□□□ -0.97
NR1I3-226ENST00000508740 H7C1D1 291 aa9.01□□□□□ -0.97
NR1I3-226ENST00000508740 EDIL3O43854 480 aa9.01□□□□□ -0.97
NR1I3-226ENST00000508740 ASNSP08243 561 aa9.01□□□□□ -0.97
NR1I3-226ENST00000508740 OR52Z1P0C646 297 aa9.01□□□□□ -0.97
NR1I3-226ENST00000508740 HSPA8P11142 646 aaKnown RBP9.01□□□□□ -0.97
NR1I3-226ENST00000508740 EPHX2P34913 555 aa9.01□□□□□ -0.97
NR1I3-226ENST00000508740 DPCR1Q3MIW9 517 aa9.01□□□□□ -0.97
NR1I3-226ENST00000508740 KIAA1755Q5JYT7 1200 aa9.01□□□□□ -0.97
NR1I3-226ENST00000508740 SPICE1Q8N0Z3 855 aa9.01□□□□□ -0.97
NR1I3-226ENST00000508740 GPC2Q8N158 579 aa9.01□□□□□ -0.97
NR1I3-226ENST00000508740 IQUBQ8NA54 791 aa9.01□□□□□ -0.97
NR1I3-226ENST00000508740 SLAIN1Q8ND83 568 aa9.01□□□□□ -0.97
NR1I3-226ENST00000508740 AMNQ9BXJ7 453 aa9.01□□□□□ -0.97
NR1I3-226ENST00000508740 SH2D4AQ9H788 454 aa9.01□□□□□ -0.97
NR1I3-226ENST00000508740 VCPKMTQ9H867 229 aa9.01□□□□□ -0.97
NR1I3-226ENST00000508740 GINM1Q9NU53 330 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms