RNA–Protein interactions for RNA: ENST00000508546.5

NEDD9-211, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 5

Gene NEDD9, Length 581 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-211ENST00000508546 COG6Q9Y2V7 657 aa11.2□□□□□ -0.62
NEDD9-211ENST00000508546 KMT2EQ8IZD2 1858 aa11.2□□□□□ -0.62
NEDD9-211ENST00000508546 TRIOO75962 3097 aa11.2□□□□□ -0.62
NEDD9-211ENST00000508546 TECTAO75443 2155 aa11.2□□□□□ -0.62
NEDD9-211ENST00000508546 ZFHX2Q9C0A1 2572 aaPredicted RBP11.2□□□□□ -0.62
NEDD9-211ENST00000508546 MINDY4BA8MYZ0 360 aa11.19□□□□□ -0.62
NEDD9-211ENST00000508546 LPXNO60711 386 aa11.19□□□□□ -0.62
NEDD9-211ENST00000508546 PLA2G6O60733 806 aa11.19□□□□□ -0.62
NEDD9-211ENST00000508546 STAT2P52630 851 aa11.19□□□□□ -0.62
NEDD9-211ENST00000508546 PSMC6P62333 389 aa11.19□□□□□ -0.62
NEDD9-211ENST00000508546 GRB10Q13322 594 aa11.19□□□□□ -0.62
NEDD9-211ENST00000508546 SLFN13Q68D06 897 aa11.19□□□□□ -0.62
NEDD9-211ENST00000508546 FAM160B2Q86V87 743 aa11.19□□□□□ -0.62
NEDD9-211ENST00000508546 PANK1Q8TE04 598 aa11.19□□□□□ -0.62
NEDD9-211ENST00000508546 MORC4Q8TE76 937 aa11.19□□□□□ -0.62
NEDD9-211ENST00000508546 CHURC1Q8WUH1 139 aa11.19□□□□□ -0.62
NEDD9-211ENST00000508546 ARNTL2Q8WYA1 636 aa11.19□□□□□ -0.62
NEDD9-211ENST00000508546 SLC9A7Q96T83 725 aa11.19□□□□□ -0.62
NEDD9-211ENST00000508546 VTA1Q9NP79 307 aa11.19□□□□□ -0.62
NEDD9-211ENST00000508546 PDGFCQ9NRA1 345 aa11.19□□□□□ -0.62
NEDD9-211ENST00000508546 CACNA1GO43497 2377 aa11.18□□□□□ -0.62
NEDD9-211ENST00000508546 TNKSO95271 1327 aa11.18□□□□□ -0.62
NEDD9-211ENST00000508546 TMEM232C9JQI7 657 aa11.18□□□□□ -0.62
NEDD9-211ENST00000508546 GFRA3O60609 400 aa11.18□□□□□ -0.62
NEDD9-211ENST00000508546 ACTN1P12814 892 aa11.18□□□□□ -0.62
NEDD9-211ENST00000508546 PTGS1P23219 599 aa11.18□□□□□ -0.62
NEDD9-211ENST00000508546 RFC2P35250 354 aa11.18□□□□□ -0.62
NEDD9-211ENST00000508546 TAP1Q03518 808 aa11.18□□□□□ -0.62
NEDD9-211ENST00000508546 STK11IPQ8N1F8 1099 aa11.18□□□□□ -0.62
NEDD9-211ENST00000508546 LRRC47Q8N1G4 583 aaKnown RBP11.18□□□□□ -0.62
NEDD9-211ENST00000508546 NEDD1Q8NHV4 660 aa11.18□□□□□ -0.62
NEDD9-211ENST00000508546 STAG1Q8WVM7 1258 aa11.18□□□□□ -0.62
NEDD9-211ENST00000508546 GMCL1Q96IK5 515 aa11.18□□□□□ -0.62
NEDD9-211ENST00000508546 TRERF1Q96PN7 1200 aa11.18□□□□□ -0.62
NEDD9-211ENST00000508546 UBE2ZQ9H832 354 aaPredicted RBP11.18□□□□□ -0.62
NEDD9-211ENST00000508546 POLR3EQ9NVU0 708 aa11.18□□□□□ -0.62
NEDD9-211ENST00000508546 CYP39A1Q9NYL5 469 aa11.18□□□□□ -0.62
NEDD9-211ENST00000508546 PLXNA3P51805 1871 aa11.18□□□□□ -0.62
NEDD9-211ENST00000508546 SIP14410 1827 aa11.17□□□□□ -0.62
NEDD9-211ENST00000508546 PTPRZ1P23471 2315 aaPredicted RBP11.17□□□□□ -0.62
NEDD9-211ENST00000508546 EPG5Q9HCE0 2579 aa11.17□□□□□ -0.62
NEDD9-211ENST00000508546 LOC102724159A0A0B4J2E5 919 aa11.17□□□□□ -0.62
NEDD9-211ENST00000508546 POTEB3A0JP26 581 aa11.17□□□□□ -0.62
NEDD9-211ENST00000508546 PRDM1O75626 825 aa11.17□□□□□ -0.62
NEDD9-211ENST00000508546 CYP2C9P11712 490 aa11.17□□□□□ -0.62
NEDD9-211ENST00000508546 ALAS1P13196 640 aa11.17□□□□□ -0.62
NEDD9-211ENST00000508546 GNAT2P19087 354 aa11.17□□□□□ -0.62
NEDD9-211ENST00000508546 PURAQ00577 322 aaKnown RBP11.17□□□□□ -0.62
NEDD9-211ENST00000508546 PWP2Q15269 919 aaKnown RBP11.17□□□□□ -0.62
NEDD9-211ENST00000508546 DUSP28Q4G0W2 176 aa11.17□□□□□ -0.62
NEDD9-211ENST00000508546 POTEBQ6S5H4 581 aa11.17□□□□□ -0.62
NEDD9-211ENST00000508546 KIAA1211Q6ZU35 1233 aa11.17□□□□□ -0.62
NEDD9-211ENST00000508546 DEFB128Q7Z7B8 93 aa11.17□□□□□ -0.62
NEDD9-211ENST00000508546 FBXO16Q8IX29 292 aaPredicted RBP11.17□□□□□ -0.62
NEDD9-211ENST00000508546 GADD45GIP1Q8TAE8 222 aaPredicted RBP11.17□□□□□ -0.62
NEDD9-211ENST00000508546 APPBP2Q92624 585 aa11.17□□□□□ -0.62
NEDD9-211ENST00000508546 OSBP2Q969R2 916 aa11.17□□□□□ -0.62
NEDD9-211ENST00000508546 BCL11AQ9H165 835 aa11.17□□□□□ -0.62
NEDD9-211ENST00000508546 EPB41L4AQ9HCS5 686 aaPredicted RBP11.17□□□□□ -0.62
NEDD9-211ENST00000508546 ZBTB40Q9NUA8 1239 aa11.17□□□□□ -0.62
NEDD9-211ENST00000508546 TRMT13Q9NUP7 481 aaKnown RBP11.17□□□□□ -0.62
NEDD9-211ENST00000508546 KIF28PB7ZC32 967 aa11.16□□□□□ -0.62
NEDD9-211ENST00000508546 PITPNM1O00562 1244 aa11.16□□□□□ -0.62
NEDD9-211ENST00000508546 MS4A1P11836 297 aa11.16□□□□□ -0.62
NEDD9-211ENST00000508546 KCNA5P22460 613 aa11.16□□□□□ -0.62
NEDD9-211ENST00000508546 SLC1A4P43007 532 aa11.16□□□□□ -0.62
NEDD9-211ENST00000508546 CPT1AP50416 773 aa11.16□□□□□ -0.62
NEDD9-211ENST00000508546 PTPN5P54829 565 aa11.16□□□□□ -0.62
NEDD9-211ENST00000508546 LEXMQ3ZCV2 418 aa11.16□□□□□ -0.62
NEDD9-211ENST00000508546 MUM1L1Q5H9M0 696 aa11.16□□□□□ -0.62
NEDD9-211ENST00000508546 TMEM63BQ5T3F8 832 aa11.16□□□□□ -0.62
NEDD9-211ENST00000508546 EEPD1Q7L9B9 569 aa11.16□□□□□ -0.62
NEDD9-211ENST00000508546 KBTBD3Q8NAB2 608 aa11.16□□□□□ -0.62
NEDD9-211ENST00000508546 GDPD5Q8WTR4 605 aa11.16□□□□□ -0.62
NEDD9-211ENST00000508546 FAM86C1Q9NVL1 165 aa11.16□□□□□ -0.62
NEDD9-211ENST00000508546 DDX49Q9Y6V7 483 aaKnown RBP11.16□□□□□ -0.62
NEDD9-211ENST00000508546 MYO15AQ9UKN7 3530 aa11.16□□□□□ -0.62
NEDD9-211ENST00000508546 RBM47A0AV96 593 aaKnown RBP11.15□□□□□ -0.62
NEDD9-211ENST00000508546 GPAA1O43292 621 aa11.15□□□□□ -0.62
NEDD9-211ENST00000508546 BAIAP3O94812 1187 aa11.15□□□□□ -0.62
NEDD9-211ENST00000508546 ZFYP08048 801 aaPredicted RBP11.15□□□□□ -0.62
NEDD9-211ENST00000508546 IQCF3P0C7M6 154 aa11.15□□□□□ -0.62
NEDD9-211ENST00000508546 TSPY3P0CV98 308 aa11.15□□□□□ -0.62
NEDD9-211ENST00000508546 TSPY8P0CW00 308 aa11.15□□□□□ -0.62
NEDD9-211ENST00000508546 TDO2P48775 406 aa11.15□□□□□ -0.62
NEDD9-211ENST00000508546 PDE4BQ07343 736 aa11.15□□□□□ -0.62
NEDD9-211ENST00000508546 TCF15Q12870 199 aa11.15□□□□□ -0.62
NEDD9-211ENST00000508546 IKQ13123 557 aaPredicted RBP11.15□□□□□ -0.62
NEDD9-211ENST00000508546 PPP4R3BQ5MIZ7 849 aa11.15□□□□□ -0.62
NEDD9-211ENST00000508546 IER5LQ5T953 404 aa11.15□□□□□ -0.62
NEDD9-211ENST00000508546 PTCRAQ6ISU1 281 aaPredicted RBP11.15□□□□□ -0.62
NEDD9-211ENST00000508546 NFRKBQ6P4R8 1299 aa11.15□□□□□ -0.62
NEDD9-211ENST00000508546 HERC6Q8IVU3 1022 aa11.15□□□□□ -0.62
NEDD9-211ENST00000508546 MTG1Q9BT17 334 aaPredicted RBP11.15□□□□□ -0.62
NEDD9-211ENST00000508546 LMCD1Q9NZU5 365 aa11.15□□□□□ -0.62
NEDD9-211ENST00000508546 ADD3Q9UEY8 706 aaKnown RBP11.15□□□□□ -0.62
NEDD9-211ENST00000508546 DDX19BQ9UMR2 479 aa11.15□□□□□ -0.62
NEDD9-211ENST00000508546 KIAA1217Q5T5P2 1943 aa11.15□□□□□ -0.62
NEDD9-211ENST00000508546 FAM186AA6NE01 2351 aa11.14□□□□□ -0.63
NEDD9-211ENST00000508546 PATL2C9JE40 543 aaKnown RBP11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms