RNA–Protein interactions for RNA: ENST00000508319.1

HMGCS1-205, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 3

Gene HMGCS1, Length 591 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-205ENST00000508319 GSPT1P15170 499 aaKnown RBP15.26■□□□□ 0.03
HMGCS1-205ENST00000508319 FPGSQ05932 587 aa15.26■□□□□ 0.03
HMGCS1-205ENST00000508319 PWP2Q15269 919 aaKnown RBP15.26■□□□□ 0.03
HMGCS1-205ENST00000508319 IQCA1Q86XH1 822 aa15.26■□□□□ 0.03
HMGCS1-205ENST00000508319 ENAHQ8N8S7 591 aaPredicted RBP15.26■□□□□ 0.03
HMGCS1-205ENST00000508319 PNMA1Q8ND90 353 aa15.26■□□□□ 0.03
HMGCS1-205ENST00000508319 ADD3Q9UEY8 706 aaKnown RBP15.26■□□□□ 0.03
HMGCS1-205ENST00000508319 PNMA2Q9UL42 364 aa15.26■□□□□ 0.03
HMGCS1-205ENST00000508319 TNKSO95271 1327 aa15.25■□□□□ 0.03
HMGCS1-205ENST00000508319 CD4P01730 458 aa15.25■□□□□ 0.03
HMGCS1-205ENST00000508319 RPS6P62753 249 aaKnown RBP15.25■□□□□ 0.03
HMGCS1-205ENST00000508319 SMAD3P84022 425 aaKnown RBP15.25■□□□□ 0.03
HMGCS1-205ENST00000508319 IMMTQ16891 758 aaKnown RBP15.25■□□□□ 0.03
HMGCS1-205ENST00000508319 TTC22Q5TAA0 569 aa15.25■□□□□ 0.03
HMGCS1-205ENST00000508319 ZNF697Q5TEC3 545 aa15.25■□□□□ 0.03
HMGCS1-205ENST00000508319 IQSEC1Q6DN90 963 aa15.25■□□□□ 0.03
HMGCS1-205ENST00000508319 CXCL17Q6UXB2 119 aa15.25■□□□□ 0.03
HMGCS1-205ENST00000508319 SLC43A3Q8NBI5 491 aa15.25■□□□□ 0.03
HMGCS1-205ENST00000508319 ANKS1AQ92625 1134 aa15.25■□□□□ 0.03
HMGCS1-205ENST00000508319 VTI1AQ96AJ9 217 aa15.25■□□□□ 0.03
HMGCS1-205ENST00000508319 RNPC3Q96LT9 517 aaKnown RBP15.25■□□□□ 0.03
HMGCS1-205ENST00000508319 ZSCAN10Q96SZ4 725 aaPredicted RBP15.25■□□□□ 0.03
HMGCS1-205ENST00000508319 AP5M1Q9H0R1 490 aa15.25■□□□□ 0.03
HMGCS1-205ENST00000508319 Q9Y3F1 56 aa15.25■□□□□ 0.03
HMGCS1-205ENST00000508319 GRIN2DO15399 1336 aa15.24■□□□□ 0.03
HMGCS1-205ENST00000508319 DYNC1LI2O43237 492 aaPredicted RBP15.24■□□□□ 0.03
HMGCS1-205ENST00000508319 EDNRBP24530 442 aa15.24■□□□□ 0.03
HMGCS1-205ENST00000508319 CALML3P27482 149 aa15.24■□□□□ 0.03
HMGCS1-205ENST00000508319 DUSP28Q4G0W2 176 aa15.24■□□□□ 0.03
HMGCS1-205ENST00000508319 CCDC178Q5BJE1 867 aa15.24■□□□□ 0.03
HMGCS1-205ENST00000508319 RNF207Q6ZRF8 634 aa15.24■□□□□ 0.03
HMGCS1-205ENST00000508319 KIAA1211Q6ZU35 1233 aa15.24■□□□□ 0.03
HMGCS1-205ENST00000508319 FAM161BQ96MY7 647 aa15.24■□□□□ 0.03
HMGCS1-205ENST00000508319 UBA5Q9GZZ9 404 aa15.24■□□□□ 0.03
HMGCS1-205ENST00000508319 KAT14Q9H8E8 782 aa15.24■□□□□ 0.03
HMGCS1-205ENST00000508319 ZSWIM5Q9P217 1185 aa15.24■□□□□ 0.03
HMGCS1-205ENST00000508319 CTNNA3Q9UI47 895 aa15.24■□□□□ 0.03
HMGCS1-205ENST00000508319 PRUNE2Q8WUY3 3088 aa15.24■□□□□ 0.03
HMGCS1-205ENST00000508319 RAD50Q92878 1312 aa15.23■□□□□ 0.03
HMGCS1-205ENST00000508319 RBM47A0AV96 593 aaKnown RBP15.23■□□□□ 0.03
HMGCS1-205ENST00000508319 CABYRO75952 493 aa15.23■□□□□ 0.03
HMGCS1-205ENST00000508319 CDC37Q16543 378 aaPredicted RBP15.23■□□□□ 0.03
HMGCS1-205ENST00000508319 USH1GQ495M9 461 aa15.23■□□□□ 0.03
HMGCS1-205ENST00000508319 MFSD5Q6N075 450 aa15.23■□□□□ 0.03
HMGCS1-205ENST00000508319 SLC17A8Q8NDX2 589 aa15.23■□□□□ 0.03
HMGCS1-205ENST00000508319 SCN10AQ9Y5Y9 1956 aa15.23■□□□□ 0.03
HMGCS1-205ENST00000508319 CHD9Q3L8U1 2897 aa15.22■□□□□ 0.03
HMGCS1-205ENST00000508319 VCANP13611 3396 aa15.22■□□□□ 0.03
HMGCS1-205ENST00000508319 TLR3O15455 904 aaKnown RBP15.22■□□□□ 0.03
HMGCS1-205ENST00000508319 ZEB2O60315 1214 aa15.22■□□□□ 0.03
HMGCS1-205ENST00000508319 ITGA7Q13683 1181 aa15.22■□□□□ 0.03
HMGCS1-205ENST00000508319 ASPRV1Q53RT3 343 aa15.22■□□□□ 0.03
HMGCS1-205ENST00000508319 DNERQ8NFT8 737 aa15.22■□□□□ 0.03
HMGCS1-205ENST00000508319 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.22■□□□□ 0.03
HMGCS1-205ENST00000508319 WDR11Q9BZH6 1224 aa15.22■□□□□ 0.03
HMGCS1-205ENST00000508319 KRT23Q9C075 422 aa15.22■□□□□ 0.03
HMGCS1-205ENST00000508319 TTYH1Q9H313 450 aaPredicted RBP15.22■□□□□ 0.03
HMGCS1-205ENST00000508319 CNNM2Q9H8M5 875 aa15.22■□□□□ 0.03
HMGCS1-205ENST00000508319 CSF2RAP15509 400 aa15.21■□□□□ 0.03
HMGCS1-205ENST00000508319 PSMC6P62333 389 aa15.21■□□□□ 0.03
HMGCS1-205ENST00000508319 IRX6P78412 446 aaPredicted RBP15.21■□□□□ 0.03
HMGCS1-205ENST00000508319 PDE4DQ08499 809 aa15.21■□□□□ 0.03
HMGCS1-205ENST00000508319 PPIGQ13427 754 aaKnown RBP eCLIP15.21■□□□□ 0.03
HMGCS1-205ENST00000508319 C16orf59Q7L2K0 433 aa15.21■□□□□ 0.03
HMGCS1-205ENST00000508319 ADGRF4Q8IZF3 695 aa15.21■□□□□ 0.03
HMGCS1-205ENST00000508319 UBAC1Q9BSL1 405 aa15.21■□□□□ 0.03
HMGCS1-205ENST00000508319 PPP1R12CQ9BZL4 782 aa15.21■□□□□ 0.03
HMGCS1-205ENST00000508319 ABCB11O95342 1321 aa15.2■□□□□ 0.02
HMGCS1-205ENST00000508319 UMODL1Q5DID0 1318 aa15.2■□□□□ 0.02
HMGCS1-205ENST00000508319 KIAA1217Q5T5P2 1943 aa15.2■□□□□ 0.02
HMGCS1-205ENST00000508319 B4GALT4O60513 344 aa15.2■□□□□ 0.02
HMGCS1-205ENST00000508319 PARP1P09874 1014 aaKnown RBP15.2■□□□□ 0.02
HMGCS1-205ENST00000508319 CYP2C18P33260 490 aa15.2■□□□□ 0.02
HMGCS1-205ENST00000508319 SEC23AQ15436 765 aa15.2■□□□□ 0.02
HMGCS1-205ENST00000508319 QRICH1Q2TAL8 776 aa15.2■□□□□ 0.02
HMGCS1-205ENST00000508319 TMEM240Q5SV17 173 aa15.2■□□□□ 0.02
HMGCS1-205ENST00000508319 RASIP1Q5U651 963 aa15.2■□□□□ 0.02
HMGCS1-205ENST00000508319 RGS22Q8NE09 1264 aa15.2■□□□□ 0.02
HMGCS1-205ENST00000508319 CDX2Q99626 313 aaPredicted RBP15.2■□□□□ 0.02
HMGCS1-205ENST00000508319 SEZ6LQ9BYH1 1024 aa15.2■□□□□ 0.02
HMGCS1-205ENST00000508319 TRPV6Q9H1D0 765 aa15.2■□□□□ 0.02
HMGCS1-205ENST00000508319 SEMA6BQ9H3T3 888 aa15.2■□□□□ 0.02
HMGCS1-205ENST00000508319 TMEM265A0A087WTH1 108 aa15.19■□□□□ 0.02
HMGCS1-205ENST00000508319 CHMLP26374 656 aa15.19■□□□□ 0.02
HMGCS1-205ENST00000508319 PURAQ00577 322 aaKnown RBP15.19■□□□□ 0.02
HMGCS1-205ENST00000508319 PPP2R5BQ15173 497 aa15.19■□□□□ 0.02
HMGCS1-205ENST00000508319 IFIT1BQ5T764 474 aaKnown RBP15.19■□□□□ 0.02
HMGCS1-205ENST00000508319 CYB5R4Q7L1T6 521 aa15.19■□□□□ 0.02
HMGCS1-205ENST00000508319 STAG2Q8N3U4 1231 aa15.19■□□□□ 0.02
HMGCS1-205ENST00000508319 TMEM199Q8N511 208 aa15.19■□□□□ 0.02
HMGCS1-205ENST00000508319 OR6J1Q8NGC5 347 aa15.19■□□□□ 0.02
HMGCS1-205ENST00000508319 SCFD2Q8WU76 684 aa15.19■□□□□ 0.02
HMGCS1-205ENST00000508319 TBC1D5Q92609 795 aa15.19■□□□□ 0.02
HMGCS1-205ENST00000508319 MPHOSPH6Q99547 160 aaKnown RBP15.19■□□□□ 0.02
HMGCS1-205ENST00000508319 NOC4LQ9BVI4 516 aaKnown RBP15.19■□□□□ 0.02
HMGCS1-205ENST00000508319 MAF1Q9H063 256 aa15.19■□□□□ 0.02
HMGCS1-205ENST00000508319 ALDH8A1Q9H2A2 487 aaPredicted RBP15.19■□□□□ 0.02
HMGCS1-205ENST00000508319 HIPK3Q9H422 1215 aa15.19■□□□□ 0.02
HMGCS1-205ENST00000508319 JMJD4Q9H9V9 463 aa15.19■□□□□ 0.02
HMGCS1-205ENST00000508319 COL20A1Q9P218 1284 aa15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms