RNA–Protein interactions for RNA: ENST00000508290.5

SFXN1-209, Transcript of sideroflexin 1, humanhuman

TSL 4

Gene SFXN1, Length 592 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-209ENST00000508290 SLC12A7Q9Y666 1083 aa23.08■■□□□ 1.29
SFXN1-209ENST00000508290 ASTN1O14525 1302 aa23.08■■□□□ 1.28
SFXN1-209ENST00000508290 SYNRGQ9UMZ2 1314 aa23.08■■□□□ 1.28
SFXN1-209ENST00000508290 NKX3-2P78367 333 aa23.07■■□□□ 1.28
SFXN1-209ENST00000508290 TNFAIP2Q03169 654 aa23.07■■□□□ 1.28
SFXN1-209ENST00000508290 KCNB2Q92953 911 aa23.07■■□□□ 1.28
SFXN1-209ENST00000508290 UPF3AQ9H1J1 476 aaKnown RBP23.07■■□□□ 1.28
SFXN1-209ENST00000508290 PNMA6FA0A0J9YX94 578 aa23.06■■□□□ 1.28
SFXN1-209ENST00000508290 PGK1P00558 417 aa23.06■■□□□ 1.28
SFXN1-209ENST00000508290 MYCNP04198 464 aaPredicted RBP23.06■■□□□ 1.28
SFXN1-209ENST00000508290 EDNRBP24530 442 aa23.06■■□□□ 1.28
SFXN1-209ENST00000508290 HSPA4P34932 840 aa23.06■■□□□ 1.28
SFXN1-209ENST00000508290 GJA9P57773 515 aa23.06■■□□□ 1.28
SFXN1-209ENST00000508290 PDE4DQ08499 809 aa23.06■■□□□ 1.28
SFXN1-209ENST00000508290 PCDHA1Q9Y5I3 950 aa23.06■■□□□ 1.28
SFXN1-209ENST00000508290 EIF5BO60841 1220 aaKnown RBP23.05■■□□□ 1.28
SFXN1-209ENST00000508290 SNX17Q15036 470 aa23.05■■□□□ 1.28
SFXN1-209ENST00000508290 C7orf61Q8IZ16 206 aa23.05■■□□□ 1.28
SFXN1-209ENST00000508290 KLHDC9Q8NEP7 349 aa23.05■■□□□ 1.28
SFXN1-209ENST00000508290 NSUN6Q8TEA1 469 aaKnown RBP23.05■■□□□ 1.28
SFXN1-209ENST00000508290 IWS1Q96ST2 819 aa23.05■■□□□ 1.28
SFXN1-209ENST00000508290 ADCYAP1R1P41586 468 aa23.04■■□□□ 1.28
SFXN1-209ENST00000508290 RCAN1P53805 252 aa23.04■■□□□ 1.28
SFXN1-209ENST00000508290 EXOSC10Q01780 885 aaKnown RBP23.04■■□□□ 1.28
SFXN1-209ENST00000508290 LRRC26Q2I0M4 334 aa23.04■■□□□ 1.28
SFXN1-209ENST00000508290 HOMER1Q86YM7 354 aa23.04■■□□□ 1.28
SFXN1-209ENST00000508290 SYTL5Q8TDW5 730 aaPredicted RBP23.04■■□□□ 1.28
SFXN1-209ENST00000508290 RRP36Q96EU6 259 aaKnown RBP23.04■■□□□ 1.28
SFXN1-209ENST00000508290 SEC63Q9UGP8 760 aaKnown RBP23.04■■□□□ 1.28
SFXN1-209ENST00000508290 CYTH3O43739 400 aa23.03■■□□□ 1.28
SFXN1-209ENST00000508290 C6orf222P0C671 652 aaPredicted RBP23.03■■□□□ 1.28
SFXN1-209ENST00000508290 HSD17B4P51659 736 aa23.03■■□□□ 1.28
SFXN1-209ENST00000508290 TAPT1Q6NXT6 567 aa23.03■■□□□ 1.28
SFXN1-209ENST00000508290 SLC39A5Q6ZMH5 540 aa23.03■■□□□ 1.28
SFXN1-209ENST00000508290 RASEFQ8IZ41 740 aa23.03■■□□□ 1.28
SFXN1-209ENST00000508290 PIGSQ96S52 555 aa23.03■■□□□ 1.28
SFXN1-209ENST00000508290 AP5M1Q9H0R1 490 aa23.03■■□□□ 1.28
SFXN1-209ENST00000508290 RBM47A0AV96 593 aaKnown RBP23.02■■□□□ 1.28
SFXN1-209ENST00000508290 NKRFO15226 690 aaKnown RBP eCLIP23.02■■□□□ 1.28
SFXN1-209ENST00000508290 ZEB2O60315 1214 aa23.02■■□□□ 1.28
SFXN1-209ENST00000508290 PSMA5P28066 241 aa23.02■■□□□ 1.28
SFXN1-209ENST00000508290 ACLYP53396 1101 aa23.02■■□□□ 1.28
SFXN1-209ENST00000508290 NOL8Q76FK4 1167 aaKnown RBP23.02■■□□□ 1.28
SFXN1-209ENST00000508290 FBXO16Q8IX29 292 aaPredicted RBP23.02■■□□□ 1.28
SFXN1-209ENST00000508290 SCFD2Q8WU76 684 aa23.02■■□□□ 1.28
SFXN1-209ENST00000508290 GLT1D1Q96MS3 346 aa23.02■■□□□ 1.28
SFXN1-209ENST00000508290 RMDN3Q96TC7 470 aa23.02■■□□□ 1.28
SFXN1-209ENST00000508290 GPHNQ9NQX3 736 aaPredicted RBP23.02■■□□□ 1.28
SFXN1-209ENST00000508290 RBM28Q9NW13 759 aaKnown RBP23.02■■□□□ 1.28
SFXN1-209ENST00000508290 GNEQ9Y223 722 aaKnown RBP23.02■■□□□ 1.28
SFXN1-209ENST00000508290 ELP1O95163 1332 aa23.02■■□□□ 1.28
SFXN1-209ENST00000508290 A0A1W2PPC1 479 aa23.01■■□□□ 1.27
SFXN1-209ENST00000508290 CABYRO75952 493 aa23.01■■□□□ 1.27
SFXN1-209ENST00000508290 CFBP00751 764 aa23.01■■□□□ 1.27
SFXN1-209ENST00000508290 ATN1P54259 1190 aaPredicted RBP23.01■■□□□ 1.27
SFXN1-209ENST00000508290 PPP2R5BQ15173 497 aa23.01■■□□□ 1.27
SFXN1-209ENST00000508290 DUSP28Q4G0W2 176 aa23.01■■□□□ 1.27
SFXN1-209ENST00000508290 GNASQ5JWF2 1037 aa23.01■■□□□ 1.27
SFXN1-209ENST00000508290 CCSAPQ6IQ19 270 aaPredicted RBP23.01■■□□□ 1.27
SFXN1-209ENST00000508290 TLK2Q86UE8 772 aa23.01■■□□□ 1.27
SFXN1-209ENST00000508290 FANCBQ8NB91 859 aa23.01■■□□□ 1.27
SFXN1-209ENST00000508290 LENG1Q96BZ8 264 aaPredicted RBP23.01■■□□□ 1.27
SFXN1-209ENST00000508290 PURBQ96QR8 312 aaKnown RBP23.01■■□□□ 1.27
SFXN1-209ENST00000508290 MYL10Q9BUA6 226 aa23.01■■□□□ 1.27
SFXN1-209ENST00000508290 SEZ6LQ9BYH1 1024 aa23.01■■□□□ 1.27
SFXN1-209ENST00000508290 PRKAG2Q9UGJ0 569 aa23.01■■□□□ 1.27
SFXN1-209ENST00000508290 LRRC37A2A6NM11 1700 aa23.01■■□□□ 1.27
SFXN1-209ENST00000508290 A0A1W2PQ45 241 aaPredicted RBP23■■□□□ 1.27
SFXN1-209ENST00000508290 A0A1W2PQY0 241 aa23■■□□□ 1.27
SFXN1-209ENST00000508290 PPP1R11O60927 126 aaPredicted RBP23■■□□□ 1.27
SFXN1-209ENST00000508290 RTP1P59025 263 aa23■■□□□ 1.27
SFXN1-209ENST00000508290 KCNA10Q16322 511 aa23■■□□□ 1.27
SFXN1-209ENST00000508290 SLC35G1Q2M3R5 365 aa23■■□□□ 1.27
SFXN1-209ENST00000508290 ADCK5Q3MIX3 580 aa23■■□□□ 1.27
SFXN1-209ENST00000508290 APOA5Q6Q788 366 aa23■■□□□ 1.27
SFXN1-209ENST00000508290 EEPD1Q7L9B9 569 aa23■■□□□ 1.27
SFXN1-209ENST00000508290 TEX2Q8IWB9 1127 aa23■■□□□ 1.27
SFXN1-209ENST00000508290 FBXL16Q8N461 479 aa23■■□□□ 1.27
SFXN1-209ENST00000508290 STARD7Q9NQZ5 370 aa23■■□□□ 1.27
SFXN1-209ENST00000508290 GCOM1H8Y6P7 765 aaPredicted RBP22.99■■□□□ 1.27
SFXN1-209ENST00000508290 ADCY6O43306 1168 aa22.99■■□□□ 1.27
SFXN1-209ENST00000508290 POLR2MP0CAP2 368 aa22.99■■□□□ 1.27
SFXN1-209ENST00000508290 SMPD1P17405 629 aa22.99■■□□□ 1.27
SFXN1-209ENST00000508290 FGD1P98174 961 aa22.99■■□□□ 1.27
SFXN1-209ENST00000508290 STXBP2Q15833 593 aa22.99■■□□□ 1.27
SFXN1-209ENST00000508290 BRDTQ58F21 947 aaPredicted RBP22.99■■□□□ 1.27
SFXN1-209ENST00000508290 ARHGEF16Q5VV41 709 aa22.99■■□□□ 1.27
SFXN1-209ENST00000508290 BLOC1S2Q6QNY1 142 aa22.99■■□□□ 1.27
SFXN1-209ENST00000508290 MICU3Q86XE3 530 aa22.99■■□□□ 1.27
SFXN1-209ENST00000508290 WDR11Q9BZH6 1224 aa22.99■■□□□ 1.27
SFXN1-209ENST00000508290 SNX14Q9Y5W7 946 aa22.99■■□□□ 1.27
SFXN1-209ENST00000508290 MROH7Q68CQ1 1323 aa22.99■■□□□ 1.27
SFXN1-209ENST00000508290 CEP290O15078 2479 aa22.99■■□□□ 1.27
SFXN1-209ENST00000508290 LCTP09848 1927 aa22.98■■□□□ 1.27
SFXN1-209ENST00000508290 C11orf97A0A1B0GVM6 126 aaPredicted RBP22.98■■□□□ 1.27
SFXN1-209ENST00000508290 OPLAHO14841 1288 aa22.98■■□□□ 1.27
SFXN1-209ENST00000508290 ZBTB43O43298 467 aa22.98■■□□□ 1.27
SFXN1-209ENST00000508290 TTLL4Q14679 1199 aa22.98■■□□□ 1.27
SFXN1-209ENST00000508290 FSCN1Q16658 493 aaKnown RBP22.98■■□□□ 1.27
SFXN1-209ENST00000508290 CHRDL2Q6WN34 429 aa22.98■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms