RNA–Protein interactions for RNA: ENST00000508100.1

ITGA3-211, Transcript of integrin subunit alpha 3, humanhuman

TSL 4

Gene ITGA3, Length 549 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA3-211ENST00000508100 OTOP2Q7RTS6 562 aa19.26■□□□□ 0.67
ITGA3-211ENST00000508100 PPM1EQ8WY54 764 aa19.26■□□□□ 0.67
ITGA3-211ENST00000508100 FAM227BQ96M60 508 aa19.26■□□□□ 0.67
ITGA3-211ENST00000508100 PRDM12Q9H4Q4 367 aa19.26■□□□□ 0.67
ITGA3-211ENST00000508100 GPHNQ9NQX3 736 aaPredicted RBP19.26■□□□□ 0.67
ITGA3-211ENST00000508100 POLR3EQ9NVU0 708 aa19.26■□□□□ 0.67
ITGA3-211ENST00000508100 UMODL1Q5DID0 1318 aa19.25■□□□□ 0.67
ITGA3-211ENST00000508100 SUPT20HL2P0C7V6 817 aa19.25■□□□□ 0.67
ITGA3-211ENST00000508100 CALML3P27482 149 aa19.25■□□□□ 0.67
ITGA3-211ENST00000508100 CPT1AP50416 773 aa19.25■□□□□ 0.67
ITGA3-211ENST00000508100 RRP1P56182 461 aaKnown RBP19.25■□□□□ 0.67
ITGA3-211ENST00000508100 BRDTQ58F21 947 aaPredicted RBP19.25■□□□□ 0.67
ITGA3-211ENST00000508100 RNF207Q6ZRF8 634 aa19.25■□□□□ 0.67
ITGA3-211ENST00000508100 MFSD6Q6ZSS7 791 aa19.25■□□□□ 0.67
ITGA3-211ENST00000508100 TICAM2Q86XR7 235 aa19.25■□□□□ 0.67
ITGA3-211ENST00000508100 USP38Q8NB14 1042 aa19.25■□□□□ 0.67
ITGA3-211ENST00000508100 SLC28A3Q9HAS3 691 aa19.25■□□□□ 0.67
ITGA3-211ENST00000508100 CXXC1Q9P0U4 656 aaPredicted RBP19.25■□□□□ 0.67
ITGA3-211ENST00000508100 TTC28Q96AY4 2481 aa19.24■□□□□ 0.67
ITGA3-211ENST00000508100 A0A0D9SFI3 127 aa19.24■□□□□ 0.67
ITGA3-211ENST00000508100 TRIM6-TRIM34B2RNG4 842 aa19.24■□□□□ 0.67
ITGA3-211ENST00000508100 HSPD1P10809 573 aaKnown RBP19.24■□□□□ 0.67
ITGA3-211ENST00000508100 PDHBP11177 359 aa19.24■□□□□ 0.67
ITGA3-211ENST00000508100 HAND2P61296 217 aa19.24■□□□□ 0.67
ITGA3-211ENST00000508100 PDE4DQ08499 809 aa19.24■□□□□ 0.67
ITGA3-211ENST00000508100 TJAP1Q5JTD0 557 aa19.24■□□□□ 0.67
ITGA3-211ENST00000508100 TTC14Q96N46 770 aa19.24■□□□□ 0.67
ITGA3-211ENST00000508100 ALDH8A1Q9H2A2 487 aaPredicted RBP19.24■□□□□ 0.67
ITGA3-211ENST00000508100 SLC4A7Q9Y6M7 1214 aa19.24■□□□□ 0.67
ITGA3-211ENST00000508100 LRRC37A2A6NM11 1700 aa19.23■□□□□ 0.67
ITGA3-211ENST00000508100 B4DLN1 442 aa19.23■□□□□ 0.67
ITGA3-211ENST00000508100 MYL3P08590 195 aa19.23■□□□□ 0.67
ITGA3-211ENST00000508100 PCP11498 1178 aaKnown RBP19.23■□□□□ 0.67
ITGA3-211ENST00000508100 MRPL12P52815 198 aaKnown RBP19.23■□□□□ 0.67
ITGA3-211ENST00000508100 ZNF543Q08ER8 600 aa19.23■□□□□ 0.67
ITGA3-211ENST00000508100 NMIQ13287 307 aaPredicted RBP19.23■□□□□ 0.67
ITGA3-211ENST00000508100 AKNAD1Q5T1N1 836 aa19.23■□□□□ 0.67
ITGA3-211ENST00000508100 SLC30A10Q6XR72 485 aa19.23■□□□□ 0.67
ITGA3-211ENST00000508100 OR6J1Q8NGC5 347 aa19.23■□□□□ 0.67
ITGA3-211ENST00000508100 CRBNQ96SW2 442 aa19.23■□□□□ 0.67
ITGA3-211ENST00000508100 WNT8AQ9H1J5 351 aa19.23■□□□□ 0.67
ITGA3-211ENST00000508100 NKX2-4Q9H2Z4 354 aa19.23■□□□□ 0.67
ITGA3-211ENST00000508100 ZMYM6O95789 1325 aa19.23■□□□□ 0.67
ITGA3-211ENST00000508100 RAD50Q92878 1312 aa19.23■□□□□ 0.67
ITGA3-211ENST00000508100 CDH23Q9H251 3354 aa19.23■□□□□ 0.67
ITGA3-211ENST00000508100 RBM47A0AV96 593 aaKnown RBP19.22■□□□□ 0.67
ITGA3-211ENST00000508100 ZBBXA8MT70 800 aa19.22■□□□□ 0.67
ITGA3-211ENST00000508100 IGFBP4P22692 258 aa19.22■□□□□ 0.67
ITGA3-211ENST00000508100 MFAP1P55081 439 aaKnown RBP19.22■□□□□ 0.67
ITGA3-211ENST00000508100 PURAQ00577 322 aaKnown RBP19.22■□□□□ 0.67
ITGA3-211ENST00000508100 HDAC1Q13547 482 aaPredicted RBP19.22■□□□□ 0.67
ITGA3-211ENST00000508100 CLEC4DQ8WXI8 215 aa19.22■□□□□ 0.67
ITGA3-211ENST00000508100 RILPL2Q969X0 211 aa19.22■□□□□ 0.67
ITGA3-211ENST00000508100 MTG1Q9BT17 334 aaPredicted RBP19.22■□□□□ 0.67
ITGA3-211ENST00000508100 RNF41Q9H4P4 317 aaPredicted RBP19.22■□□□□ 0.67
ITGA3-211ENST00000508100 PRUNE2Q8WUY3 3088 aa19.22■□□□□ 0.67
ITGA3-211ENST00000508100 TNKSO95271 1327 aa19.22■□□□□ 0.67
ITGA3-211ENST00000508100 CCDC171Q6TFL3 1326 aa19.22■□□□□ 0.67
ITGA3-211ENST00000508100 EYSQ5T1H1 3165 aa19.22■□□□□ 0.67
ITGA3-211ENST00000508100 NKRFO15226 690 aaKnown RBP eCLIP19.21■□□□□ 0.67
ITGA3-211ENST00000508100 PFKMP08237 780 aa19.21■□□□□ 0.67
ITGA3-211ENST00000508100 RPS6P62753 249 aaKnown RBP19.21■□□□□ 0.67
ITGA3-211ENST00000508100 PPP2R5BQ15173 497 aa19.21■□□□□ 0.67
ITGA3-211ENST00000508100 FAM47CQ5HY64 1035 aa19.21■□□□□ 0.67
ITGA3-211ENST00000508100 ZNF589Q86UQ0 364 aaPredicted RBP19.21■□□□□ 0.67
ITGA3-211ENST00000508100 DNERQ8NFT8 737 aa19.21■□□□□ 0.67
ITGA3-211ENST00000508100 ESR2Q92731 530 aa19.21■□□□□ 0.67
ITGA3-211ENST00000508100 SCLYQ96I15 445 aa19.21■□□□□ 0.67
ITGA3-211ENST00000508100 TRMT13Q9NUP7 481 aaKnown RBP19.21■□□□□ 0.67
ITGA3-211ENST00000508100 LCTP09848 1927 aa19.21■□□□□ 0.67
ITGA3-211ENST00000508100 WDR19Q8NEZ3 1342 aa19.21■□□□□ 0.67
ITGA3-211ENST00000508100 KPNA6O60684 536 aa19.2■□□□□ 0.66
ITGA3-211ENST00000508100 CYP2C9P11712 490 aa19.2■□□□□ 0.66
ITGA3-211ENST00000508100 GPATCH4Q5T3I0 446 aaKnown RBP19.2■□□□□ 0.66
ITGA3-211ENST00000508100 SCFD2Q8WU76 684 aa19.2■□□□□ 0.66
ITGA3-211ENST00000508100 YBX2Q9Y2T7 364 aaKnown RBP19.2■□□□□ 0.66
ITGA3-211ENST00000508100 TXNP10599 105 aaKnown RBP19.19■□□□□ 0.66
ITGA3-211ENST00000508100 RABGGTBP53611 331 aa19.19■□□□□ 0.66
ITGA3-211ENST00000508100 CCDC85BQ15834 202 aaPredicted RBP19.19■□□□□ 0.66
ITGA3-211ENST00000508100 ATXN2LQ8WWM7 1075 aaKnown RBP19.19■□□□□ 0.66
ITGA3-211ENST00000508100 LNPKQ9C0E8 428 aa19.19■□□□□ 0.66
ITGA3-211ENST00000508100 PRDM6Q9NQX0 595 aa19.19■□□□□ 0.66
ITGA3-211ENST00000508100 THEGQ9P2T0 379 aa19.19■□□□□ 0.66
ITGA3-211ENST00000508100 PCDHA11Q9Y5I1 949 aa19.19■□□□□ 0.66
ITGA3-211ENST00000508100 ZNF213O14771 459 aa19.18■□□□□ 0.66
ITGA3-211ENST00000508100 SNHG28P0DPA3 235 aa19.18■□□□□ 0.66
ITGA3-211ENST00000508100 ACTN1P12814 892 aa19.18■□□□□ 0.66
ITGA3-211ENST00000508100 ATP2A2P16615 1042 aaKnown RBP19.18■□□□□ 0.66
ITGA3-211ENST00000508100 ADGRE1Q14246 886 aa19.18■□□□□ 0.66
ITGA3-211ENST00000508100 TTLL4Q14679 1199 aa19.18■□□□□ 0.66
ITGA3-211ENST00000508100 NBPF20Q3BBV1 942 aa19.18■□□□□ 0.66
ITGA3-211ENST00000508100 USH1GQ495M9 461 aa19.18■□□□□ 0.66
ITGA3-211ENST00000508100 CCDC178Q5BJE1 867 aa19.18■□□□□ 0.66
ITGA3-211ENST00000508100 PPP2R2DQ66LE6 453 aa19.18■□□□□ 0.66
ITGA3-211ENST00000508100 DEFB128Q7Z7B8 93 aa19.18■□□□□ 0.66
ITGA3-211ENST00000508100 TBC1D10CQ8IV04 446 aa19.18■□□□□ 0.66
ITGA3-211ENST00000508100 RETREG2Q8NC44 543 aa19.18■□□□□ 0.66
ITGA3-211ENST00000508100 VCANP13611 3396 aa19.17■□□□□ 0.66
ITGA3-211ENST00000508100 GOLGA8HP0CJ92 632 aa19.17■□□□□ 0.66
ITGA3-211ENST00000508100 EDNRBP24530 442 aa19.17■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms