RNA–Protein interactions for RNA: ENST00000507905.6

SMN1-206, Transcript of survival of motor neuron 1, telomeric, humanhuman

TSL 5

Gene SMN1, Length 431 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN1-206ENST00000507905 LIMS1P48059 325 aa8.59□□□□□ -1.03
SMN1-206ENST00000507905 NFIXQ14938 502 aa8.59□□□□□ -1.03
SMN1-206ENST00000507905 CABP7Q86V35 215 aa8.59□□□□□ -1.03
SMN1-206ENST00000507905 SP8Q8IXZ3 490 aa8.59□□□□□ -1.03
SMN1-206ENST00000507905 FEZF2Q8TBJ5 459 aa8.59□□□□□ -1.03
SMN1-206ENST00000507905 SEC16BQ96JE7 1060 aa8.59□□□□□ -1.03
SMN1-206ENST00000507905 BACE2Q9Y5Z0 518 aa8.59□□□□□ -1.03
SMN1-206ENST00000507905 CASP7P55210 303 aa8.58□□□□□ -1.04
SMN1-206ENST00000507905 KIAA1211LQ6NV74 962 aa8.58□□□□□ -1.04
SMN1-206ENST00000507905 ZDHHC14Q8IZN3 488 aa8.58□□□□□ -1.04
SMN1-206ENST00000507905 GLI4P10075 376 aa8.57□□□□□ -1.04
SMN1-206ENST00000507905 NCAM1P13591 858 aa8.57□□□□□ -1.04
SMN1-206ENST00000507905 FOXO4P98177 505 aa8.57□□□□□ -1.04
SMN1-206ENST00000507905 GRB10Q13322 594 aa8.57□□□□□ -1.04
SMN1-206ENST00000507905 VHLLQ6RSH7 139 aa8.57□□□□□ -1.04
SMN1-206ENST00000507905 CPNE8Q86YQ8 564 aa8.57□□□□□ -1.04
SMN1-206ENST00000507905 LZTR1Q8N653 840 aa8.57□□□□□ -1.04
SMN1-206ENST00000507905 LUC7LQ9NQ29 371 aaKnown RBP8.57□□□□□ -1.04
SMN1-206ENST00000507905 RTEL1Q9NZ71 1219 aa8.57□□□□□ -1.04
SMN1-206ENST00000507905 FAN1Q9Y2M0 1017 aa8.57□□□□□ -1.04
SMN1-206ENST00000507905 ANKRD34BA5PLL1 514 aa8.56□□□□□ -1.04
SMN1-206ENST00000507905 ATF2P15336 505 aa8.56□□□□□ -1.04
SMN1-206ENST00000507905 PAMP19021 973 aa8.56□□□□□ -1.04
SMN1-206ENST00000507905 FBLN1P23142 703 aa8.56□□□□□ -1.04
SMN1-206ENST00000507905 TP53I13Q8NBR0 393 aaPredicted RBP8.56□□□□□ -1.04
SMN1-206ENST00000507905 RNF38Q9H0F5 515 aa8.56□□□□□ -1.04
SMN1-206ENST00000507905 KIAA1522Q9P206 1035 aaPredicted RBP8.56□□□□□ -1.04
SMN1-206ENST00000507905 SUSD2Q9UGT4 822 aa8.56□□□□□ -1.04
SMN1-206ENST00000507905 PLA2G2DQ9UNK4 145 aa8.56□□□□□ -1.04
SMN1-206ENST00000507905 AKT3Q9Y243 479 aa8.56□□□□□ -1.04
SMN1-206ENST00000507905 RWDD3Q9Y3V2 267 aa8.56□□□□□ -1.04
SMN1-206ENST00000507905 TRBV23OR9-2A0A075B6M9 112 aa8.55□□□□□ -1.04
SMN1-206ENST00000507905 NPHP3-ACAD11A0A0J9YXS1 232 aa8.55□□□□□ -1.04
SMN1-206ENST00000507905 FFAR3O14843 346 aa8.55□□□□□ -1.04
SMN1-206ENST00000507905 SYN1P17600 705 aa8.55□□□□□ -1.04
SMN1-206ENST00000507905 CAP1Q01518 475 aa8.55□□□□□ -1.04
SMN1-206ENST00000507905 SYT8Q8NBV8 401 aa8.55□□□□□ -1.04
SMN1-206ENST00000507905 ALG3Q92685 438 aa8.55□□□□□ -1.04
SMN1-206ENST00000507905 TGIF2Q9GZN2 237 aa8.55□□□□□ -1.04
SMN1-206ENST00000507905 RXFP1Q9HBX9 757 aa8.55□□□□□ -1.04
SMN1-206ENST00000507905 INPP5FQ9Y2H2 1132 aa8.55□□□□□ -1.04
SMN1-206ENST00000507905 FAM169BQ8N8A8 192 aa8.54□□□□□ -1.04
SMN1-206ENST00000507905 USP33Q8TEY7 942 aa8.54□□□□□ -1.04
SMN1-206ENST00000507905 APBA2Q99767 749 aa8.54□□□□□ -1.04
SMN1-206ENST00000507905 ACBD3Q9H3P7 528 aa8.54□□□□□ -1.04
SMN1-206ENST00000507905 GULP1Q9UBP9 304 aa8.54□□□□□ -1.04
SMN1-206ENST00000507905 NUDT5Q9UKK9 219 aa8.54□□□□□ -1.04
SMN1-206ENST00000507905 STRIP2Q9ULQ0 834 aa8.54□□□□□ -1.04
SMN1-206ENST00000507905 PPP1R11O60927 126 aaPredicted RBP8.53□□□□□ -1.04
SMN1-206ENST00000507905 ASGR2P07307 311 aa8.53□□□□□ -1.04
SMN1-206ENST00000507905 HOMEZQ8IX15 550 aa8.53□□□□□ -1.04
SMN1-206ENST00000507905 ZNF513Q8N8E2 541 aaPredicted RBP8.53□□□□□ -1.04
SMN1-206ENST00000507905 NETO2Q8NC67 525 aa8.53□□□□□ -1.04
SMN1-206ENST00000507905 BVESQ8NE79 360 aa8.53□□□□□ -1.04
SMN1-206ENST00000507905 CXorf38Q8TB03 319 aa8.53□□□□□ -1.04
SMN1-206ENST00000507905 FNIP1Q8TF40 1166 aa8.53□□□□□ -1.04
SMN1-206ENST00000507905 ANAPC16Q96DE5 110 aa8.53□□□□□ -1.04
SMN1-206ENST00000507905 PEX11GQ96HA9 241 aa8.53□□□□□ -1.04
SMN1-206ENST00000507905 FBLN5Q9UBX5 448 aa8.53□□□□□ -1.04
SMN1-206ENST00000507905 APEX2Q9UBZ4 518 aa8.53□□□□□ -1.04
SMN1-206ENST00000507905 PMF1-BGLAPU3KQ54 211 aa8.53□□□□□ -1.04
SMN1-206ENST00000507905 KCNH1O95259 989 aa8.52□□□□□ -1.05
SMN1-206ENST00000507905 KCNC1P48547 511 aa8.52□□□□□ -1.05
SMN1-206ENST00000507905 POMZP3Q6PJE2 187 aa8.52□□□□□ -1.05
SMN1-206ENST00000507905 CRACR2BQ8N4Y2 399 aaPredicted RBP8.52□□□□□ -1.05
SMN1-206ENST00000507905 TSPAN17Q96FV3 270 aa8.52□□□□□ -1.05
SMN1-206ENST00000507905 MTA3Q9BTC8 594 aa8.52□□□□□ -1.05
SMN1-206ENST00000507905 BCAS3Q9H6U6 928 aa8.52□□□□□ -1.05
SMN1-206ENST00000507905 CCSER2Q9H7U1 834 aa8.52□□□□□ -1.05
SMN1-206ENST00000507905 EMC9Q9Y3B6 208 aa8.52□□□□□ -1.05
SMN1-206ENST00000507905 C7orf72A4D263 438 aa8.51□□□□□ -1.05
SMN1-206ENST00000507905 NOP56O00567 594 aaKnown RBP8.51□□□□□ -1.05
SMN1-206ENST00000507905 NPHS1O60500 1241 aa8.51□□□□□ -1.05
SMN1-206ENST00000507905 PLA2G1BP04054 148 aaKnown RBP8.51□□□□□ -1.05
SMN1-206ENST00000507905 NAT2P11245 290 aa8.51□□□□□ -1.05
SMN1-206ENST00000507905 MC3RP41968 323 aa8.51□□□□□ -1.05
SMN1-206ENST00000507905 SLURP1P55000 103 aa8.51□□□□□ -1.05
SMN1-206ENST00000507905 TRIM26Q12899 539 aaPredicted RBP8.51□□□□□ -1.05
SMN1-206ENST00000507905 SLC9A5Q14940 896 aa8.51□□□□□ -1.05
SMN1-206ENST00000507905 ERICH6BQ5W0A0 696 aa8.51□□□□□ -1.05
SMN1-206ENST00000507905 KRTAP4-2Q9BYR5 136 aa8.51□□□□□ -1.05
SMN1-206ENST00000507905 GPRC5CQ9NQ84 441 aa8.51□□□□□ -1.05
SMN1-206ENST00000507905 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP8.51□□□□□ -1.05
SMN1-206ENST00000507905 UNCXA6NJT0 531 aa8.5□□□□□ -1.05
SMN1-206ENST00000507905 ZBTB7AO95365 584 aa8.5□□□□□ -1.05
SMN1-206ENST00000507905 PMLP29590 882 aa8.5□□□□□ -1.05
SMN1-206ENST00000507905 ZNF143P52747 638 aaPredicted RBP8.5□□□□□ -1.05
SMN1-206ENST00000507905 RBM10P98175 930 aaKnown RBP8.5□□□□□ -1.05
SMN1-206ENST00000507905 NCAPHQ15003 741 aa8.5□□□□□ -1.05
SMN1-206ENST00000507905 VWA3BQ502W6 1294 aa8.5□□□□□ -1.05
SMN1-206ENST00000507905 FRMD5Q7Z6J6 570 aa8.5□□□□□ -1.05
SMN1-206ENST00000507905 COPS5Q92905 334 aa8.5□□□□□ -1.05
SMN1-206ENST00000507905 PPP1R14AQ96A00 147 aa8.5□□□□□ -1.05
SMN1-206ENST00000507905 CLEC1BQ9P126 229 aa8.5□□□□□ -1.05
SMN1-206ENST00000507905 PLS3P13797 630 aa8.49□□□□□ -1.05
SMN1-206ENST00000507905 HTRA3P83110 453 aa8.49□□□□□ -1.05
SMN1-206ENST00000507905 SCRN1Q12765 414 aa8.49□□□□□ -1.05
SMN1-206ENST00000507905 WWC2Q6AWC2 1192 aa8.49□□□□□ -1.05
SMN1-206ENST00000507905 B3GNT8Q7Z7M8 397 aa8.49□□□□□ -1.05
SMN1-206ENST00000507905 TEPSINQ96N21 525 aa8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms