RNA–Protein interactions for RNA: ENST00000507162.1

VCAN-207, Transcript of versican, humanhuman

TSL 3

Gene VCAN, Length 766 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-207ENST00000507162 MAP1BP46821 2468 aaKnown RBP8.76□□□□□ -1.01
VCAN-207ENST00000507162 RBAK-RBAKDNI3L0D1 243 aa8.76□□□□□ -1.01
VCAN-207ENST00000507162 CSPG5O95196 566 aa8.76□□□□□ -1.01
VCAN-207ENST00000507162 PDGFBP01127 241 aaPredicted RBP8.76□□□□□ -1.01
VCAN-207ENST00000507162 CNTN2Q02246 1040 aa8.76□□□□□ -1.01
VCAN-207ENST00000507162 ICA1Q05084 483 aa8.76□□□□□ -1.01
VCAN-207ENST00000507162 TTC39AQ5SRH9 613 aa8.76□□□□□ -1.01
VCAN-207ENST00000507162 FAM83BQ5T0W9 1011 aa8.76□□□□□ -1.01
VCAN-207ENST00000507162 TMEM63BQ5T3F8 832 aa8.76□□□□□ -1.01
VCAN-207ENST00000507162 TMEM179Q6ZVK1 233 aa8.76□□□□□ -1.01
VCAN-207ENST00000507162 ZNF579Q8NAF0 562 aaKnown RBP8.76□□□□□ -1.01
VCAN-207ENST00000507162 REPS2Q8NFH8 660 aa8.76□□□□□ -1.01
VCAN-207ENST00000507162 KCNG4Q8TDN1 519 aa8.76□□□□□ -1.01
VCAN-207ENST00000507162 FGD4Q96M96 766 aa8.76□□□□□ -1.01
VCAN-207ENST00000507162 KATNBL1Q9H079 304 aa8.76□□□□□ -1.01
VCAN-207ENST00000507162 CD207Q9UJ71 328 aa8.76□□□□□ -1.01
VCAN-207ENST00000507162 INSL6Q9Y581 213 aa8.76□□□□□ -1.01
VCAN-207ENST00000507162 PLXNA3P51805 1871 aa8.76□□□□□ -1.01
VCAN-207ENST00000507162 MCM3APO60318 1980 aa8.75□□□□□ -1.01
VCAN-207ENST00000507162 COL4A4P53420 1690 aaPredicted RBP8.75□□□□□ -1.01
VCAN-207ENST00000507162 H3BNC9 293 aa8.75□□□□□ -1.01
VCAN-207ENST00000507162 ZBED4O75132 1171 aa8.75□□□□□ -1.01
VCAN-207ENST00000507162 CYP2E1P05181 493 aaPredicted RBP8.75□□□□□ -1.01
VCAN-207ENST00000507162 DDX10Q13206 875 aaKnown RBP8.75□□□□□ -1.01
VCAN-207ENST00000507162 SMAD4Q13485 552 aaKnown RBP8.75□□□□□ -1.01
VCAN-207ENST00000507162 IKBKEQ14164 716 aa8.75□□□□□ -1.01
VCAN-207ENST00000507162 IQSEC1Q6DN90 963 aa8.75□□□□□ -1.01
VCAN-207ENST00000507162 CNKSR3Q6P9H4 555 aa8.75□□□□□ -1.01
VCAN-207ENST00000507162 KIAA1211Q6ZU35 1233 aa8.75□□□□□ -1.01
VCAN-207ENST00000507162 KIAA2013Q8IYS2 634 aa8.75□□□□□ -1.01
VCAN-207ENST00000507162 COL26A1Q96A83 441 aa8.75□□□□□ -1.01
VCAN-207ENST00000507162 ASIC4Q96FT7 647 aa8.75□□□□□ -1.01
VCAN-207ENST00000507162 RAVER2Q9HCJ3 691 aaKnown RBP8.75□□□□□ -1.01
VCAN-207ENST00000507162 PIH1D3Q9NQM4 214 aaKnown RBP8.75□□□□□ -1.01
VCAN-207ENST00000507162 POLR3EQ9NVU0 708 aa8.75□□□□□ -1.01
VCAN-207ENST00000507162 RALYQ9UKM9 306 aaKnown RBP8.75□□□□□ -1.01
VCAN-207ENST00000507162 DMDP11532 3685 aa8.75□□□□□ -1.01
VCAN-207ENST00000507162 ABHD14A-ACY1A0A1B0GW23 586 aa8.74□□□□□ -1.01
VCAN-207ENST00000507162 ASB14A6NK59 587 aa8.74□□□□□ -1.01
VCAN-207ENST00000507162 IDH1O75874 414 aaKnown RBP8.74□□□□□ -1.01
VCAN-207ENST00000507162 EEF2P13639 858 aaKnown RBP8.74□□□□□ -1.01
VCAN-207ENST00000507162 AKR1B1P15121 316 aa8.74□□□□□ -1.01
VCAN-207ENST00000507162 GTF2F1P35269 517 aaKnown RBP eCLIP8.74□□□□□ -1.01
VCAN-207ENST00000507162 ZAP70P43403 619 aa8.74□□□□□ -1.01
VCAN-207ENST00000507162 NUBP1P53384 320 aa8.74□□□□□ -1.01
VCAN-207ENST00000507162 PUM1Q14671 1186 aaKnown RBP eCLIP8.74□□□□□ -1.01
VCAN-207ENST00000507162 COL19A1Q14993 1142 aa8.74□□□□□ -1.01
VCAN-207ENST00000507162 ST3GAL2Q16842 350 aa8.74□□□□□ -1.01
VCAN-207ENST00000507162 TCTN1Q2MV58 587 aa8.74□□□□□ -1.01
VCAN-207ENST00000507162 CCDC158Q5M9N0 1113 aa8.74□□□□□ -1.01
VCAN-207ENST00000507162 LIN28BQ6ZN17 250 aaKnown RBP eCLIP8.74□□□□□ -1.01
VCAN-207ENST00000507162 ZBTB33Q86T24 672 aa8.74□□□□□ -1.01
VCAN-207ENST00000507162 WDR63Q8IWG1 891 aa8.74□□□□□ -1.01
VCAN-207ENST00000507162 TMEM192Q8IY95 271 aa8.74□□□□□ -1.01
VCAN-207ENST00000507162 MYOCDQ8IZQ8 938 aa8.74□□□□□ -1.01
VCAN-207ENST00000507162 MRPL50Q8N5N7 158 aaKnown RBP8.74□□□□□ -1.01
VCAN-207ENST00000507162 DYNLL2Q96FJ2 89 aa8.74□□□□□ -1.01
VCAN-207ENST00000507162 RPGRIP1Q96KN7 1286 aa8.74□□□□□ -1.01
VCAN-207ENST00000507162 NUP88Q99567 741 aaPredicted RBP8.74□□□□□ -1.01
VCAN-207ENST00000507162 SLF1Q9BQI6 1058 aa8.74□□□□□ -1.01
VCAN-207ENST00000507162 MTG1Q9BT17 334 aaPredicted RBP8.74□□□□□ -1.01
VCAN-207ENST00000507162 GOPCQ9HD26 462 aa8.74□□□□□ -1.01
VCAN-207ENST00000507162 HOMER2Q9NSB8 354 aa8.74□□□□□ -1.01
VCAN-207ENST00000507162 MCM9Q9NXL9 1143 aa8.74□□□□□ -1.01
VCAN-207ENST00000507162 FRYLO94915 3013 aa8.73□□□□□ -1.01
VCAN-207ENST00000507162 LINC01565O15544 149 aa8.73□□□□□ -1.01
VCAN-207ENST00000507162 CYP2D6P10635 497 aa8.73□□□□□ -1.01
VCAN-207ENST00000507162 SELPP16109 830 aa8.73□□□□□ -1.01
VCAN-207ENST00000507162 PURAQ00577 322 aaKnown RBP8.73□□□□□ -1.01
VCAN-207ENST00000507162 GABPAQ06546 454 aa8.73□□□□□ -1.01
VCAN-207ENST00000507162 HYAL1Q12794 435 aa8.73□□□□□ -1.01
VCAN-207ENST00000507162 GPNMBQ14956 572 aa8.73□□□□□ -1.01
VCAN-207ENST00000507162 PTGISQ16647 500 aa8.73□□□□□ -1.01
VCAN-207ENST00000507162 CTC1Q2NKJ3 1217 aa8.73□□□□□ -1.01
VCAN-207ENST00000507162 LRRFIP1Q32MZ4 808 aaKnown RBP8.73□□□□□ -1.01
VCAN-207ENST00000507162 MCTP2Q6DN12 878 aa8.73□□□□□ -1.01
VCAN-207ENST00000507162 TAPT1Q6NXT6 567 aa8.73□□□□□ -1.01
VCAN-207ENST00000507162 FBXO16Q8IX29 292 aaPredicted RBP8.73□□□□□ -1.01
VCAN-207ENST00000507162 CCDC155Q8N6L0 562 aa8.73□□□□□ -1.01
VCAN-207ENST00000507162 RIPOR3Q96MK2 946 aa8.73□□□□□ -1.01
VCAN-207ENST00000507162 SAMD11Q96NU1 681 aa8.73□□□□□ -1.01
VCAN-207ENST00000507162 FBXO40Q9UH90 709 aa8.73□□□□□ -1.01
VCAN-207ENST00000507162 COG6Q9Y2V7 657 aa8.73□□□□□ -1.01
VCAN-207ENST00000507162 Q9Y3F1 56 aa8.73□□□□□ -1.01
VCAN-207ENST00000507162 MYH1P12882 1939 aa8.73□□□□□ -1.01
VCAN-207ENST00000507162 TRIP12Q14669 1992 aaPredicted RBP8.73□□□□□ -1.01
VCAN-207ENST00000507162 LOC730098B7Z3J9 87 aa8.72□□□□□ -1.01
VCAN-207ENST00000507162 USP17L12C9JPN9 530 aa8.72□□□□□ -1.01
VCAN-207ENST00000507162 USP17L21D6R901 530 aa8.72□□□□□ -1.01
VCAN-207ENST00000507162 NBNO60934 754 aa8.72□□□□□ -1.01
VCAN-207ENST00000507162 UPP2O95045 317 aa8.72□□□□□ -1.01
VCAN-207ENST00000507162 NDUFV1P49821 464 aa8.72□□□□□ -1.01
VCAN-207ENST00000507162 BRDTQ58F21 947 aaPredicted RBP8.72□□□□□ -1.01
VCAN-207ENST00000507162 NFRKBQ6P4R8 1299 aa8.72□□□□□ -1.01
VCAN-207ENST00000507162 LRRC8DQ7L1W4 858 aa8.72□□□□□ -1.01
VCAN-207ENST00000507162 CERS3Q8IU89 383 aa8.72□□□□□ -1.01
VCAN-207ENST00000507162 PRPF38AQ8NAV1 312 aaKnown RBP8.72□□□□□ -1.01
VCAN-207ENST00000507162 CHST13Q8NET6 341 aa8.72□□□□□ -1.01
VCAN-207ENST00000507162 AFAP1L1Q8TED9 768 aa8.72□□□□□ -1.01
VCAN-207ENST00000507162 KIFC2Q96AC6 838 aa8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms