RNA–Protein interactions for RNA: ENST00000507009.5

GYPB-208, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 388 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-208ENST00000507009 TTC28Q96AY4 2481 aa6.89□□□□□ -1.31
GYPB-208ENST00000507009 DNAJC25-GNG10A0A024R161 153 aa6.88□□□□□ -1.31
GYPB-208ENST00000507009 DYNC1LI2O43237 492 aaPredicted RBP6.88□□□□□ -1.31
GYPB-208ENST00000507009 APPP05067 770 aa6.88□□□□□ -1.31
GYPB-208ENST00000507009 ALAS1P13196 640 aa6.88□□□□□ -1.31
GYPB-208ENST00000507009 RASA1P20936 1047 aa6.88□□□□□ -1.31
GYPB-208ENST00000507009 CST5P28325 142 aaPredicted RBP6.88□□□□□ -1.31
GYPB-208ENST00000507009 TDO2P48775 406 aa6.88□□□□□ -1.31
GYPB-208ENST00000507009 HNRNPUQ00839 825 aaKnown RBP eCLIP6.88□□□□□ -1.31
GYPB-208ENST00000507009 ITGA7Q13683 1181 aa6.88□□□□□ -1.31
GYPB-208ENST00000507009 RASIP1Q5U651 963 aa6.88□□□□□ -1.31
GYPB-208ENST00000507009 MAMDC4Q6UXC1 1216 aa6.88□□□□□ -1.31
GYPB-208ENST00000507009 MSL3Q8N5Y2 521 aaKnown RBP6.88□□□□□ -1.31
GYPB-208ENST00000507009 HERVK_113Q902F9 699 aa6.88□□□□□ -1.31
GYPB-208ENST00000507009 FGD4Q96M96 766 aa6.88□□□□□ -1.31
GYPB-208ENST00000507009 GNL3Q9BVP2 549 aaKnown RBP eCLIP6.88□□□□□ -1.31
GYPB-208ENST00000507009 PUS7LQ9H0K6 701 aaKnown RBP6.88□□□□□ -1.31
GYPB-208ENST00000507009 UPF3AQ9H1J1 476 aaKnown RBP6.88□□□□□ -1.31
GYPB-208ENST00000507009 ARPP21Q9UBL0 812 aaPredicted RBP6.88□□□□□ -1.31
GYPB-208ENST00000507009 FBXO40Q9UH90 709 aa6.88□□□□□ -1.31
GYPB-208ENST00000507009 COG6Q9Y2V7 657 aa6.88□□□□□ -1.31
GYPB-208ENST00000507009 CHD9Q3L8U1 2897 aa6.88□□□□□ -1.31
GYPB-208ENST00000507009 ASTN1O14525 1302 aa6.87□□□□□ -1.31
GYPB-208ENST00000507009 TMEM232C9JQI7 657 aa6.87□□□□□ -1.31
GYPB-208ENST00000507009 SMARCA5O60264 1052 aaPredicted RBP6.87□□□□□ -1.31
GYPB-208ENST00000507009 ZEB2O60315 1214 aa6.87□□□□□ -1.31
GYPB-208ENST00000507009 B4GALT4O60513 344 aa6.87□□□□□ -1.31
GYPB-208ENST00000507009 CD4P01730 458 aa6.87□□□□□ -1.31
GYPB-208ENST00000507009 MYL3P08590 195 aa6.87□□□□□ -1.31
GYPB-208ENST00000507009 CYP2C9P11712 490 aa6.87□□□□□ -1.31
GYPB-208ENST00000507009 BMP3P12645 472 aa6.87□□□□□ -1.31
GYPB-208ENST00000507009 ATP2A2P16615 1042 aaKnown RBP6.87□□□□□ -1.31
GYPB-208ENST00000507009 ATP5JP18859 108 aa6.87□□□□□ -1.31
GYPB-208ENST00000507009 FSCN1Q16658 493 aaKnown RBP6.87□□□□□ -1.31
GYPB-208ENST00000507009 FAM47CQ5HY64 1035 aa6.87□□□□□ -1.31
GYPB-208ENST00000507009 TMEM63BQ5T3F8 832 aa6.87□□□□□ -1.31
GYPB-208ENST00000507009 SLFN13Q68D06 897 aa6.87□□□□□ -1.31
GYPB-208ENST00000507009 KRT40Q6A162 431 aa6.87□□□□□ -1.31
GYPB-208ENST00000507009 ZSCAN25Q6NSZ9 544 aa6.87□□□□□ -1.31
GYPB-208ENST00000507009 THSD4Q6ZMP0 1018 aa6.87□□□□□ -1.31
GYPB-208ENST00000507009 FBXO16Q8IX29 292 aaPredicted RBP6.87□□□□□ -1.31
GYPB-208ENST00000507009 ZNF444Q8N0Y2 327 aaPredicted RBP6.87□□□□□ -1.31
GYPB-208ENST00000507009 CHST13Q8NET6 341 aa6.87□□□□□ -1.31
GYPB-208ENST00000507009 PPIL4Q8WUA2 492 aaKnown RBP eCLIP6.87□□□□□ -1.31
GYPB-208ENST00000507009 ARNTL2Q8WYA1 636 aa6.87□□□□□ -1.31
GYPB-208ENST00000507009 WNT2BQ93097 391 aa6.87□□□□□ -1.31
GYPB-208ENST00000507009 CEP95Q96GE4 821 aa6.87□□□□□ -1.31
GYPB-208ENST00000507009 AGBL1Q96MI9 1066 aa6.87□□□□□ -1.31
GYPB-208ENST00000507009 HAUS7Q99871 368 aa6.87□□□□□ -1.31
GYPB-208ENST00000507009 NOC4LQ9BVI4 516 aaKnown RBP6.87□□□□□ -1.31
GYPB-208ENST00000507009 FTOQ9C0B1 505 aaKnown RBP eCLIP6.87□□□□□ -1.31
GYPB-208ENST00000507009 WNT8AQ9H1J5 351 aa6.87□□□□□ -1.31
GYPB-208ENST00000507009 ACAD9Q9H845 621 aa6.87□□□□□ -1.31
GYPB-208ENST00000507009 SLC38A10Q9HBR0 1119 aa6.87□□□□□ -1.31
GYPB-208ENST00000507009 PDGFCQ9NRA1 345 aa6.87□□□□□ -1.31
GYPB-208ENST00000507009 RNF146Q9NTX7 359 aa6.87□□□□□ -1.31
GYPB-208ENST00000507009 NYAP2Q9P242 653 aa6.87□□□□□ -1.31
GYPB-208ENST00000507009 FEM1BQ9UK73 627 aa6.87□□□□□ -1.31
GYPB-208ENST00000507009 LRRC37A2A6NM11 1700 aa6.87□□□□□ -1.31
GYPB-208ENST00000507009 SCN5AQ14524 2016 aa6.86□□□□□ -1.31
GYPB-208ENST00000507009 GREB1LQ9C091 1923 aaPredicted RBP6.86□□□□□ -1.31
GYPB-208ENST00000507009 GRIN2DO15399 1336 aa6.86□□□□□ -1.31
GYPB-208ENST00000507009 ZBED9Q6R2W3 1325 aa6.86□□□□□ -1.31
GYPB-208ENST00000507009 SOWAHBA6NEL2 793 aa6.86□□□□□ -1.31
GYPB-208ENST00000507009 FAM86C2PA6NEL3 165 aa6.86□□□□□ -1.31
GYPB-208ENST00000507009 PPP1R3GB7ZBB8 358 aa6.86□□□□□ -1.31
GYPB-208ENST00000507009 CTAGE5O15320 804 aa6.86□□□□□ -1.31
GYPB-208ENST00000507009 HMMRO75330 724 aa6.86□□□□□ -1.31
GYPB-208ENST00000507009 CA3P07451 260 aa6.86□□□□□ -1.31
GYPB-208ENST00000507009 SMPD1P17405 629 aa6.86□□□□□ -1.31
GYPB-208ENST00000507009 TTLL4Q14679 1199 aa6.86□□□□□ -1.31
GYPB-208ENST00000507009 UBE3CQ15386 1083 aa6.86□□□□□ -1.31
GYPB-208ENST00000507009 AAK1Q2M2I8 961 aa6.86□□□□□ -1.31
GYPB-208ENST00000507009 TMEM67Q5HYA8 995 aa6.86□□□□□ -1.31
GYPB-208ENST00000507009 TYW1BQ6NUM6 668 aa6.86□□□□□ -1.31
GYPB-208ENST00000507009 NSMFQ6X4W1 530 aa6.86□□□□□ -1.31
GYPB-208ENST00000507009 KIAA1211Q6ZU35 1233 aa6.86□□□□□ -1.31
GYPB-208ENST00000507009 RPUSD2Q8IZ73 545 aaKnown RBP6.86□□□□□ -1.31
GYPB-208ENST00000507009 TRERF1Q96PN7 1200 aa6.86□□□□□ -1.31
GYPB-208ENST00000507009 PURBQ96QR8 312 aaKnown RBP6.86□□□□□ -1.31
GYPB-208ENST00000507009 STRBPQ96SI9 672 aaKnown RBP6.86□□□□□ -1.31
GYPB-208ENST00000507009 EPHX3Q9H6B9 360 aa6.86□□□□□ -1.31
GYPB-208ENST00000507009 A1CFQ9NQ94 594 aaKnown RBP6.86□□□□□ -1.31
GYPB-208ENST00000507009 TRMT13Q9NUP7 481 aaKnown RBP6.86□□□□□ -1.31
GYPB-208ENST00000507009 PCDHA11Q9Y5I1 949 aa6.86□□□□□ -1.31
GYPB-208ENST00000507009 REV3LO60673 3130 aa6.86□□□□□ -1.31
GYPB-208ENST00000507009 EPOPA6NHQ4 379 aa6.85□□□□□ -1.31
GYPB-208ENST00000507009 ASB14A6NK59 587 aa6.85□□□□□ -1.31
GYPB-208ENST00000507009 GSG1L2A8MUP6 293 aa6.85□□□□□ -1.31
GYPB-208ENST00000507009 RBAK-RBAKDNI3L0D1 243 aa6.85□□□□□ -1.31
GYPB-208ENST00000507009 CCER2I3L3R5 266 aa6.85□□□□□ -1.31
GYPB-208ENST00000507009 RAB11FIP3O75154 756 aa6.85□□□□□ -1.31
GYPB-208ENST00000507009 CABYRO75952 493 aa6.85□□□□□ -1.31
GYPB-208ENST00000507009 TTLL1O95922 423 aa6.85□□□□□ -1.31
GYPB-208ENST00000507009 TSPY3P0CV98 308 aa6.85□□□□□ -1.31
GYPB-208ENST00000507009 TSPY8P0CW00 308 aa6.85□□□□□ -1.31
GYPB-208ENST00000507009 BMP1P13497 986 aa6.85□□□□□ -1.31
GYPB-208ENST00000507009 MCCP23508 829 aa6.85□□□□□ -1.31
GYPB-208ENST00000507009 STAT2P52630 851 aa6.85□□□□□ -1.31
GYPB-208ENST00000507009 CAMK2BQ13554 666 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms