RNA–Protein interactions for RNA: ENST00000506779.1

TOPBP1-205, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 536 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-205ENST00000506779 ZNF761Q86XN6 746 aaPredicted RBP4.56□□□□□ -1.68
TOPBP1-205ENST00000506779 EAF1Q96JC9 268 aaPredicted RBP4.56□□□□□ -1.68
TOPBP1-205ENST00000506779 ZNF341Q9BYN7 854 aa4.56□□□□□ -1.68
TOPBP1-205ENST00000506779 IMPACTQ9P2X3 320 aa4.56□□□□□ -1.68
TOPBP1-205ENST00000506779 NISCHQ9Y2I1 1504 aa4.56□□□□□ -1.68
TOPBP1-205ENST00000506779 NPIPB8E9PQR5 432 aa4.55□□□□□ -1.68
TOPBP1-205ENST00000506779 ZNF16P17020 682 aaPredicted RBP4.55□□□□□ -1.68
TOPBP1-205ENST00000506779 AUHQ13825 339 aaKnown RBP4.55□□□□□ -1.68
TOPBP1-205ENST00000506779 CWF19L1Q69YN2 538 aaKnown RBP4.55□□□□□ -1.68
TOPBP1-205ENST00000506779 DPY19L2P1Q6NXN4 242 aa4.55□□□□□ -1.68
TOPBP1-205ENST00000506779 RPTNQ6XPR3 784 aa4.55□□□□□ -1.68
TOPBP1-205ENST00000506779 JAMLQ86YT9 394 aa4.55□□□□□ -1.68
TOPBP1-205ENST00000506779 PALM2Q8IXS6 379 aa4.55□□□□□ -1.68
TOPBP1-205ENST00000506779 TMEM192Q8IY95 271 aa4.55□□□□□ -1.68
TOPBP1-205ENST00000506779 CCDC144CPQ8IYA2 1237 aa4.55□□□□□ -1.68
TOPBP1-205ENST00000506779 REXO1Q8N1G1 1221 aaKnown RBP4.55□□□□□ -1.68
TOPBP1-205ENST00000506779 GIPC2Q8TF65 315 aa4.55□□□□□ -1.68
TOPBP1-205ENST00000506779 NKD1Q969G9 470 aa4.55□□□□□ -1.68
TOPBP1-205ENST00000506779 CRAMP1Q96RY5 1269 aa4.55□□□□□ -1.68
TOPBP1-205ENST00000506779 BCL2L13Q9BXK5 485 aa4.55□□□□□ -1.68
TOPBP1-205ENST00000506779 TNFRSF12AQ9NP84 129 aa4.55□□□□□ -1.68
TOPBP1-205ENST00000506779 AP5S1Q9NUS5 200 aa4.55□□□□□ -1.68
TOPBP1-205ENST00000506779 ADAMTS1Q9UHI8 967 aa4.55□□□□□ -1.68
TOPBP1-205ENST00000506779 ZNF536O15090 1300 aa4.54□□□□□ -1.68
TOPBP1-205ENST00000506779 A0A1W2PQJ5 194 aa4.54□□□□□ -1.68
TOPBP1-205ENST00000506779 MEIS3P2A8K0S8 358 aa4.54□□□□□ -1.68
TOPBP1-205ENST00000506779 TNFRSF10CO14798 259 aa4.54□□□□□ -1.68
TOPBP1-205ENST00000506779 GSNP06396 782 aa4.54□□□□□ -1.68
TOPBP1-205ENST00000506779 GSTM1P09488 218 aa4.54□□□□□ -1.68
TOPBP1-205ENST00000506779 ATF2P15336 505 aa4.54□□□□□ -1.68
TOPBP1-205ENST00000506779 VAV1P15498 845 aa4.54□□□□□ -1.68
TOPBP1-205ENST00000506779 CTSKP43235 329 aa4.54□□□□□ -1.68
TOPBP1-205ENST00000506779 KRTAP10-11P60412 298 aa4.54□□□□□ -1.68
TOPBP1-205ENST00000506779 DPTQ07507 201 aa4.54□□□□□ -1.68
TOPBP1-205ENST00000506779 PLEKHN1Q494U1 663 aaPredicted RBP4.54□□□□□ -1.68
TOPBP1-205ENST00000506779 ZC3H14Q6PJT7 736 aaKnown RBP4.54□□□□□ -1.68
TOPBP1-205ENST00000506779 GLCCI1Q86VQ1 547 aa4.54□□□□□ -1.68
TOPBP1-205ENST00000506779 JMJD8Q96S16 334 aa4.54□□□□□ -1.68
TOPBP1-205ENST00000506779 ANTXR1Q9H6X2 564 aa4.54□□□□□ -1.68
TOPBP1-205ENST00000506779 CD248Q9HCU0 757 aa4.54□□□□□ -1.68
TOPBP1-205ENST00000506779 PRR13Q9NZ81 148 aa4.54□□□□□ -1.68
TOPBP1-205ENST00000506779 ACSL6Q9UKU0 697 aa4.54□□□□□ -1.68
TOPBP1-205ENST00000506779 SARSP49591 514 aaKnown RBP4.53□□□□□ -1.68
TOPBP1-205ENST00000506779 MRPL58Q14197 206 aaKnown RBP4.53□□□□□ -1.68
TOPBP1-205ENST00000506779 KRTAP15-1Q3LI76 137 aa4.53□□□□□ -1.68
TOPBP1-205ENST00000506779 ZNF326Q5BKZ1 582 aaKnown RBP4.53□□□□□ -1.68
TOPBP1-205ENST00000506779 TDRD10Q5VZ19 366 aaKnown RBP4.53□□□□□ -1.68
TOPBP1-205ENST00000506779 KIAA0825Q8IV33 1275 aa4.53□□□□□ -1.68
TOPBP1-205ENST00000506779 C7orf61Q8IZ16 206 aa4.53□□□□□ -1.68
TOPBP1-205ENST00000506779 DHRS1Q96LJ7 313 aa4.53□□□□□ -1.68
TOPBP1-205ENST00000506779 SLC9A7Q96T83 725 aa4.53□□□□□ -1.68
TOPBP1-205ENST00000506779 SUCOQ9UBS9 1254 aaKnown RBP4.53□□□□□ -1.68
TOPBP1-205ENST00000506779 INVSQ9Y283 1065 aa4.53□□□□□ -1.68
TOPBP1-205ENST00000506779 UNCXA6NJT0 531 aa4.52□□□□□ -1.69
TOPBP1-205ENST00000506779 MAPKAPK2P49137 400 aa4.52□□□□□ -1.69
TOPBP1-205ENST00000506779 NR1I3Q14994 352 aa4.52□□□□□ -1.69
TOPBP1-205ENST00000506779 NOL9Q5SY16 702 aaKnown RBP4.52□□□□□ -1.69
TOPBP1-205ENST00000506779 HLA-DQA1Q5Y7H0 255 aa4.52□□□□□ -1.69
TOPBP1-205ENST00000506779 BICRALQ6AI39 1079 aa4.52□□□□□ -1.69
TOPBP1-205ENST00000506779 CYP2R1Q6VVX0 501 aa4.52□□□□□ -1.69
TOPBP1-205ENST00000506779 SPON2Q9BUD6 331 aa4.52□□□□□ -1.69
TOPBP1-205ENST00000506779 NT5C1AQ9BXI3 368 aa4.52□□□□□ -1.69
TOPBP1-205ENST00000506779 H0Y8X5 98 aa4.51□□□□□ -1.69
TOPBP1-205ENST00000506779 RECKO95980 971 aa4.51□□□□□ -1.69
TOPBP1-205ENST00000506779 RTP2Q5QGT7 225 aa4.51□□□□□ -1.69
TOPBP1-205ENST00000506779 SMARCC1Q92922 1105 aaPredicted RBP4.51□□□□□ -1.69
TOPBP1-205ENST00000506779 ZG16BQ96DA0 208 aa4.51□□□□□ -1.69
TOPBP1-205ENST00000506779 FERD3LQ96RJ6 166 aa4.51□□□□□ -1.69
TOPBP1-205ENST00000506779 DBR1Q9UK59 544 aaKnown RBP4.51□□□□□ -1.69
TOPBP1-205ENST00000506779 FAN1Q9Y2M0 1017 aa4.51□□□□□ -1.69
TOPBP1-205ENST00000506779 C9IYK1 514 aa4.5□□□□□ -1.69
TOPBP1-205ENST00000506779 IMPDH2P12268 514 aa4.5□□□□□ -1.69
TOPBP1-205ENST00000506779 VAMP1P23763 118 aa4.5□□□□□ -1.69
TOPBP1-205ENST00000506779 PMS1P54277 932 aaKnown RBP4.5□□□□□ -1.69
TOPBP1-205ENST00000506779 SPDYAQ5MJ70 313 aa4.5□□□□□ -1.69
TOPBP1-205ENST00000506779 LDLRAD1Q5T700 205 aa4.5□□□□□ -1.69
TOPBP1-205ENST00000506779 FBXW10Q5XX13 1052 aa4.5□□□□□ -1.69
TOPBP1-205ENST00000506779 ZNF585AQ6P3V2 769 aa4.5□□□□□ -1.69
TOPBP1-205ENST00000506779 PAQR3Q6TCH7 311 aa4.5□□□□□ -1.69
TOPBP1-205ENST00000506779 SLITRK4Q8IW52 837 aa4.5□□□□□ -1.69
TOPBP1-205ENST00000506779 LGI4Q8N135 537 aa4.5□□□□□ -1.69
TOPBP1-205ENST00000506779 ZNF428Q96B54 188 aa4.5□□□□□ -1.69
TOPBP1-205ENST00000506779 SLC12A9Q9BXP2 914 aa4.5□□□□□ -1.69
TOPBP1-205ENST00000506779 FAM86C1Q9NVL1 165 aa4.5□□□□□ -1.69
TOPBP1-205ENST00000506779 KIAA1522Q9P206 1035 aaPredicted RBP4.5□□□□□ -1.69
TOPBP1-205ENST00000506779 ZNRF3Q9ULT6 936 aa4.5□□□□□ -1.69
TOPBP1-205ENST00000506779 SHOXO15266 292 aa4.49□□□□□ -1.69
TOPBP1-205ENST00000506779 CYBBP04839 570 aa4.49□□□□□ -1.69
TOPBP1-205ENST00000506779 DBHP09172 617 aa4.49□□□□□ -1.69
TOPBP1-205ENST00000506779 TACR1P25103 407 aa4.49□□□□□ -1.69
TOPBP1-205ENST00000506779 NOP2P46087 812 aaKnown RBP4.49□□□□□ -1.69
TOPBP1-205ENST00000506779 ABHD18Q0P651 414 aa4.49□□□□□ -1.69
TOPBP1-205ENST00000506779 R3HDM1Q15032 1099 aaKnown RBP4.49□□□□□ -1.69
TOPBP1-205ENST00000506779 DCAF15Q66K64 600 aa4.49□□□□□ -1.69
TOPBP1-205ENST00000506779 USP48Q86UV5 1035 aa4.49□□□□□ -1.69
TOPBP1-205ENST00000506779 AMER2Q8N7J2 671 aa4.49□□□□□ -1.69
TOPBP1-205ENST00000506779 TMEM52Q8NDY8 209 aa4.49□□□□□ -1.69
TOPBP1-205ENST00000506779 DEF6Q9H4E7 631 aa4.49□□□□□ -1.69
TOPBP1-205ENST00000506779 PDLIM7Q9NR12 457 aa4.49□□□□□ -1.69
TOPBP1-205ENST00000506779 NTMQ9P121 344 aa4.49□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms