RNA–Protein interactions for RNA: ENST00000506401.6

ITGA3-207, Transcript of integrin subunit alpha 3, humanhuman

TSL 2

Gene ITGA3, Length 1,817 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA3-207ENST00000506401 LAD1O00515 517 aa20.3■□□□□ 0.84
ITGA3-207ENST00000506401 NR1I2O75469 434 aa20.3■□□□□ 0.84
ITGA3-207ENST00000506401 LETM1O95202 739 aaPredicted RBP20.3■□□□□ 0.84
ITGA3-207ENST00000506401 CFBP00751 764 aa20.3■□□□□ 0.84
ITGA3-207ENST00000506401 FASTKD5Q7L8L6 764 aaKnown RBP20.3■□□□□ 0.84
ITGA3-207ENST00000506401 ALAS1P13196 640 aa20.3■□□□□ 0.84
ITGA3-207ENST00000506401 HOXA7P31268 230 aaPredicted RBP20.3■□□□□ 0.84
ITGA3-207ENST00000506401 OAZ1P54368 228 aa20.3■□□□□ 0.84
ITGA3-207ENST00000506401 TREML2Q5T2D2 321 aa20.3■□□□□ 0.84
ITGA3-207ENST00000506401 RESP18Q5W5W9 173 aa20.3■□□□□ 0.84
ITGA3-207ENST00000506401 MCF2L2Q86YR7 1114 aa20.3■□□□□ 0.84
ITGA3-207ENST00000506401 C4orf32Q8N8J7 132 aa20.3■□□□□ 0.84
ITGA3-207ENST00000506401 MRVI1Q9Y6F6 885 aa20.3■□□□□ 0.84
ITGA3-207ENST00000506401 COL11A1P12107 1806 aaPredicted RBP20.29■□□□□ 0.84
ITGA3-207ENST00000506401 USP11P51784 963 aa20.29■□□□□ 0.84
ITGA3-207ENST00000506401 SNAPC2Q13487 334 aa20.29■□□□□ 0.84
ITGA3-207ENST00000506401 SHC4Q6S5L8 630 aa20.29■□□□□ 0.84
ITGA3-207ENST00000506401 FAM13BQ9NYF5 915 aa20.29■□□□□ 0.84
ITGA3-207ENST00000506401 NEMFO60524 1076 aa20.28■□□□□ 0.84
ITGA3-207ENST00000506401 GCFC2P16383 781 aaKnown RBP20.28■□□□□ 0.84
ITGA3-207ENST00000506401 HOXA13P31271 388 aaPredicted RBP20.28■□□□□ 0.84
ITGA3-207ENST00000506401 NDUFA8P51970 172 aa20.28■□□□□ 0.84
ITGA3-207ENST00000506401 PPP4R3AQ6IN85 833 aa20.28■□□□□ 0.84
ITGA3-207ENST00000506401 SAMD3Q8N6K7 520 aa20.28■□□□□ 0.84
ITGA3-207ENST00000506401 ENGASEQ8NFI3 743 aa20.28■□□□□ 0.84
ITGA3-207ENST00000506401 EHMT1Q9H9B1 1298 aa20.28■□□□□ 0.84
ITGA3-207ENST00000506401 TRPM7Q96QT4 1865 aa20.28■□□□□ 0.84
ITGA3-207ENST00000506401 SPDYE16A6NNV3 312 aaPredicted RBP20.27■□□□□ 0.84
ITGA3-207ENST00000506401 KINO60870 393 aaKnown RBP20.27■□□□□ 0.84
ITGA3-207ENST00000506401 ITGBL1O95965 494 aaPredicted RBP20.27■□□□□ 0.84
ITGA3-207ENST00000506401 PFKFB1P16118 471 aa20.27■□□□□ 0.84
ITGA3-207ENST00000506401 PRPHP41219 470 aa20.27■□□□□ 0.84
ITGA3-207ENST00000506401 PABPC4Q13310 644 aaKnown RBP eCLIP20.27■□□□□ 0.84
ITGA3-207ENST00000506401 SNW1Q13573 536 aaKnown RBP20.27■□□□□ 0.84
ITGA3-207ENST00000506401 GSE1Q14687 1217 aa20.27■□□□□ 0.84
ITGA3-207ENST00000506401 REPS2Q8NFH8 660 aa20.27■□□□□ 0.84
ITGA3-207ENST00000506401 TBC1D5Q92609 795 aa20.27■□□□□ 0.84
ITGA3-207ENST00000506401 WNK4Q96J92 1243 aa20.27■□□□□ 0.84
ITGA3-207ENST00000506401 CSRNP2Q9H175 543 aa20.27■□□□□ 0.84
ITGA3-207ENST00000506401 NUP62CLQ9H1M0 184 aa20.27■□□□□ 0.84
ITGA3-207ENST00000506401 AGTPBP1Q9UPW5 1226 aa20.27■□□□□ 0.84
ITGA3-207ENST00000506401 FAM237AA0A1B0GTK4 181 aa20.27■□□□□ 0.84
ITGA3-207ENST00000506401 VWA3AA6NCI4 1184 aa20.27■□□□□ 0.84
ITGA3-207ENST00000506401 ATP2A1O14983 1001 aa20.27■□□□□ 0.84
ITGA3-207ENST00000506401 IRX3P78415 501 aaPredicted RBP20.27■□□□□ 0.84
ITGA3-207ENST00000506401 DTHD1Q6ZMT9 781 aa20.27■□□□□ 0.84
ITGA3-207ENST00000506401 FCHSD1Q86WN1 690 aa20.27■□□□□ 0.84
ITGA3-207ENST00000506401 FMR1NBQ8N0W7 255 aaPredicted RBP20.27■□□□□ 0.84
ITGA3-207ENST00000506401 CLEC4DQ8WXI8 215 aa20.27■□□□□ 0.84
ITGA3-207ENST00000506401 TRERF1Q96PN7 1200 aa20.27■□□□□ 0.84
ITGA3-207ENST00000506401 MAP3K20Q9NYL2 800 aaKnown RBP20.27■□□□□ 0.84
ITGA3-207ENST00000506401 GJA5P36382 358 aa20.26■□□□□ 0.83
ITGA3-207ENST00000506401 GRIN1Q05586 938 aa20.26■□□□□ 0.83
ITGA3-207ENST00000506401 MB21D1Q8N884 522 aa20.26■□□□□ 0.83
ITGA3-207ENST00000506401 TMEM60Q9H2L4 133 aa20.26■□□□□ 0.83
ITGA3-207ENST00000506401 CLSTN2Q9H4D0 955 aa20.26■□□□□ 0.83
ITGA3-207ENST00000506401 HOMER2Q9NSB8 354 aa20.26■□□□□ 0.83
ITGA3-207ENST00000506401 EDIL3O43854 480 aa20.25■□□□□ 0.83
ITGA3-207ENST00000506401 OR52Z1P0C646 297 aa20.25■□□□□ 0.83
ITGA3-207ENST00000506401 OSBPP22059 807 aa20.25■□□□□ 0.83
ITGA3-207ENST00000506401 LONP1P36776 959 aaKnown RBP20.25■□□□□ 0.83
ITGA3-207ENST00000506401 SREBF1P36956 1147 aa20.25■□□□□ 0.83
ITGA3-207ENST00000506401 SYKP43405 635 aa20.25■□□□□ 0.83
ITGA3-207ENST00000506401 HSD17B4P51659 736 aa20.25■□□□□ 0.83
ITGA3-207ENST00000506401 ZNF445P59923 1031 aa20.25■□□□□ 0.83
ITGA3-207ENST00000506401 ARHGAP4P98171 946 aa20.25■□□□□ 0.83
ITGA3-207ENST00000506401 TMEM132BQ14DG7 1078 aa20.25■□□□□ 0.83
ITGA3-207ENST00000506401 TKFCQ3LXA3 575 aa20.25■□□□□ 0.83
ITGA3-207ENST00000506401 SPECC1Q5M775 1068 aa20.25■□□□□ 0.83
ITGA3-207ENST00000506401 SNRNP48Q6IEG0 339 aaKnown RBP20.25■□□□□ 0.83
ITGA3-207ENST00000506401 TEX13BQ9BXU2 312 aa20.25■□□□□ 0.83
ITGA3-207ENST00000506401 TNMDQ9H2S6 317 aa20.25■□□□□ 0.83
ITGA3-207ENST00000506401 HPSEQ9Y251 543 aa20.25■□□□□ 0.83
ITGA3-207ENST00000506401 ZNF202O95125 648 aa20.25■□□□□ 0.83
ITGA3-207ENST00000506401 TDP2O95551 362 aa20.25■□□□□ 0.83
ITGA3-207ENST00000506401 CALCRLQ16602 461 aa20.25■□□□□ 0.83
ITGA3-207ENST00000506401 MUM1L1Q5H9M0 696 aa20.25■□□□□ 0.83
ITGA3-207ENST00000506401 MOXD1Q6UVY6 613 aa20.25■□□□□ 0.83
ITGA3-207ENST00000506401 P2RX7Q99572 595 aaKnown RBP20.25■□□□□ 0.83
ITGA3-207ENST00000506401 DDX25Q9UHL0 483 aaKnown RBP20.25■□□□□ 0.83
ITGA3-207ENST00000506401 ZNF214Q9UL59 606 aaPredicted RBP20.25■□□□□ 0.83
ITGA3-207ENST00000506401 SYCE3A1L190 88 aa20.24■□□□□ 0.83
ITGA3-207ENST00000506401 NFIBO00712 420 aa20.24■□□□□ 0.83
ITGA3-207ENST00000506401 STAT3P40763 770 aa20.24■□□□□ 0.83
ITGA3-207ENST00000506401 GTF2A2P52657 109 aa20.24■□□□□ 0.83
ITGA3-207ENST00000506401 GHRHRQ02643 423 aa20.24■□□□□ 0.83
ITGA3-207ENST00000506401 MOGSQ13724 837 aa20.24■□□□□ 0.83
ITGA3-207ENST00000506401 PLS1Q14651 629 aa20.24■□□□□ 0.83
ITGA3-207ENST00000506401 CAMK4Q16566 473 aa20.24■□□□□ 0.83
ITGA3-207ENST00000506401 CST9Q5W186 159 aa20.24■□□□□ 0.83
ITGA3-207ENST00000506401 ASCC2Q9H1I8 757 aaPredicted RBP20.24■□□□□ 0.83
ITGA3-207ENST00000506401 GPBP1L1Q9HC44 474 aaPredicted RBP20.24■□□□□ 0.83
ITGA3-207ENST00000506401 RNF146Q9NTX7 359 aa20.24■□□□□ 0.83
ITGA3-207ENST00000506401 KCNH3Q9ULD8 1083 aa20.24■□□□□ 0.83
ITGA3-207ENST00000506401 CYP3A7-CYP3A51PA0A087WV96 503 aa20.23■□□□□ 0.83
ITGA3-207ENST00000506401 CTAGE5O15320 804 aa20.23■□□□□ 0.83
ITGA3-207ENST00000506401 CETPP11597 493 aa20.23■□□□□ 0.83
ITGA3-207ENST00000506401 CYP3A7P24462 503 aa20.23■□□□□ 0.83
ITGA3-207ENST00000506401 IL17AQ16552 155 aa20.23■□□□□ 0.83
ITGA3-207ENST00000506401 LBX2Q6XYB7 198 aa20.23■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms