RNA–Protein interactions for RNA: ENST00000506233.5

SCLT1-207, Transcript of sodium channel and clathrin linker 1, humanhuman

TSL 2

Gene SCLT1, Length 3,673 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-207ENST00000506233 SRBD1Q8N5C6 995 aaKnown RBP6.86□□□□□ -1.31
SCLT1-207ENST00000506233 TBC1D16Q8TBP0 767 aa6.86□□□□□ -1.31
SCLT1-207ENST00000506233 SH3RF3Q8TEJ3 882 aaPredicted RBP6.86□□□□□ -1.31
SCLT1-207ENST00000506233 EAF1Q96JC9 268 aaPredicted RBP6.86□□□□□ -1.31
SCLT1-207ENST00000506233 C2orf49Q9BVC5 232 aaPredicted RBP6.86□□□□□ -1.31
SCLT1-207ENST00000506233 HDAC5Q9UQL6 1122 aa6.86□□□□□ -1.31
SCLT1-207ENST00000506233 YDJCA8MPS7 323 aa6.86□□□□□ -1.31
SCLT1-207ENST00000506233 PSEN2P49810 448 aa6.86□□□□□ -1.31
SCLT1-207ENST00000506233 PPP4CP60510 307 aa6.86□□□□□ -1.31
SCLT1-207ENST00000506233 EDEM1Q92611 657 aa6.86□□□□□ -1.31
SCLT1-207ENST00000506233 PHKBQ93100 1093 aa6.86□□□□□ -1.31
SCLT1-207ENST00000506233 INTS13Q9NVM9 706 aa6.86□□□□□ -1.31
SCLT1-207ENST00000506233 TMEM260Q9NX78 707 aa6.86□□□□□ -1.31
SCLT1-207ENST00000506233 MAD2L2Q9UI95 211 aa6.86□□□□□ -1.31
SCLT1-207ENST00000506233 PCDHA7Q9UN72 937 aa6.86□□□□□ -1.31
SCLT1-207ENST00000506233 MSRB2Q9Y3D2 182 aa6.86□□□□□ -1.31
SCLT1-207ENST00000506233 STK36Q9NRP7 1315 aa6.85□□□□□ -1.31
SCLT1-207ENST00000506233 PPP1R11O60927 126 aaPredicted RBP6.85□□□□□ -1.31
SCLT1-207ENST00000506233 PLEKHA8P1O95397 391 aa6.85□□□□□ -1.31
SCLT1-207ENST00000506233 PDGFAP04085 211 aa6.85□□□□□ -1.31
SCLT1-207ENST00000506233 C11orf57Q6ZUT1 292 aaPredicted RBP6.85□□□□□ -1.31
SCLT1-207ENST00000506233 PHF20Q9BVI0 1012 aa6.85□□□□□ -1.31
SCLT1-207ENST00000506233 TYW1Q9NV66 732 aaKnown RBP6.85□□□□□ -1.31
SCLT1-207ENST00000506233 RTEL1Q9NZ71 1219 aa6.85□□□□□ -1.31
SCLT1-207ENST00000506233 SIRPGQ9P1W8 387 aa6.85□□□□□ -1.31
SCLT1-207ENST00000506233 SERTAD1Q9UHV2 236 aa6.85□□□□□ -1.31
SCLT1-207ENST00000506233 ARID2Q68CP9 1835 aa6.85□□□□□ -1.31
SCLT1-207ENST00000506233 VIL1P09327 827 aaKnown RBP6.85□□□□□ -1.31
SCLT1-207ENST00000506233 UBE2HP62256 183 aa6.85□□□□□ -1.31
SCLT1-207ENST00000506233 NFX1Q12986 1120 aaKnown RBP6.85□□□□□ -1.31
SCLT1-207ENST00000506233 USP4Q13107 963 aa6.85□□□□□ -1.31
SCLT1-207ENST00000506233 CCDC81Q6ZN84 652 aa6.85□□□□□ -1.31
SCLT1-207ENST00000506233 USP49Q70CQ1 688 aa6.85□□□□□ -1.31
SCLT1-207ENST00000506233 PLA2G4DQ86XP0 818 aa6.85□□□□□ -1.31
SCLT1-207ENST00000506233 HOMER2Q9NSB8 354 aa6.85□□□□□ -1.31
SCLT1-207ENST00000506233 SSC5DA1L4H1 1573 aa6.85□□□□□ -1.31
SCLT1-207ENST00000506233 EYSQ5T1H1 3165 aa6.85□□□□□ -1.31
SCLT1-207ENST00000506233 LDHAP00338 332 aaKnown RBP6.85□□□□□ -1.31
SCLT1-207ENST00000506233 SARSP49591 514 aaKnown RBP6.85□□□□□ -1.31
SCLT1-207ENST00000506233 PPARAQ07869 468 aa6.85□□□□□ -1.31
SCLT1-207ENST00000506233 AKNAD1Q5T1N1 836 aa6.85□□□□□ -1.31
SCLT1-207ENST00000506233 NUDT12Q9BQG2 462 aa6.85□□□□□ -1.31
SCLT1-207ENST00000506233 ST7Q9NRC1 585 aa6.85□□□□□ -1.31
SCLT1-207ENST00000506233 GPR75-ASB3A0A0A6YYF3 556 aa6.84□□□□□ -1.31
SCLT1-207ENST00000506233 FOXN1O15353 648 aa6.84□□□□□ -1.31
SCLT1-207ENST00000506233 KIF4AO95239 1232 aa6.84□□□□□ -1.31
SCLT1-207ENST00000506233 TAF1CQ15572 869 aaPredicted RBP6.84□□□□□ -1.31
SCLT1-207ENST00000506233 NFE2Q16621 373 aaPredicted RBP6.84□□□□□ -1.31
SCLT1-207ENST00000506233 C12orf60Q5U649 245 aa6.84□□□□□ -1.31
SCLT1-207ENST00000506233 CRACR2BQ8N4Y2 399 aaPredicted RBP6.84□□□□□ -1.31
SCLT1-207ENST00000506233 ERCC4Q92889 916 aaPredicted RBP6.84□□□□□ -1.31
SCLT1-207ENST00000506233 ANAPC16Q96DE5 110 aa6.84□□□□□ -1.31
SCLT1-207ENST00000506233 ZKSCAN3Q9BRR0 538 aa6.84□□□□□ -1.31
SCLT1-207ENST00000506233 SPON2Q9BUD6 331 aa6.84□□□□□ -1.31
SCLT1-207ENST00000506233 CNNM1Q9NRU3 951 aa6.84□□□□□ -1.31
SCLT1-207ENST00000506233 CD2APQ9Y5K6 639 aa6.84□□□□□ -1.31
SCLT1-207ENST00000506233 ZNFX1Q9P2E3 1918 aaKnown RBP6.84□□□□□ -1.31
SCLT1-207ENST00000506233 CNTNAP1P78357 1384 aa6.84□□□□□ -1.31
SCLT1-207ENST00000506233 ORC4O43929 436 aa6.84□□□□□ -1.31
SCLT1-207ENST00000506233 CLCN6P51797 869 aa6.84□□□□□ -1.31
SCLT1-207ENST00000506233 CCDC158Q5M9N0 1113 aa6.84□□□□□ -1.31
SCLT1-207ENST00000506233 RNF20Q5VTR2 975 aa6.84□□□□□ -1.31
SCLT1-207ENST00000506233 KRT27Q7Z3Y8 459 aa6.84□□□□□ -1.31
SCLT1-207ENST00000506233 SCUBE3Q8IX30 993 aa6.84□□□□□ -1.31
SCLT1-207ENST00000506233 FBXO2Q9UK22 296 aaPredicted RBP6.84□□□□□ -1.31
SCLT1-207ENST00000506233 JAG2Q9Y219 1238 aa6.84□□□□□ -1.31
SCLT1-207ENST00000506233 BAZ2BQ9UIF8 2168 aaKnown RBP6.84□□□□□ -1.31
SCLT1-207ENST00000506233 DOCK1Q14185 1865 aa6.84□□□□□ -1.31
SCLT1-207ENST00000506233 DOCK5Q9H7D0 1870 aa6.84□□□□□ -1.31
SCLT1-207ENST00000506233 UQCRFS1P1P0C7P4 283 aa6.83□□□□□ -1.32
SCLT1-207ENST00000506233 SNHG28P0DPA3 235 aa6.83□□□□□ -1.32
SCLT1-207ENST00000506233 NDUFA8P51970 172 aa6.83□□□□□ -1.32
SCLT1-207ENST00000506233 FGD1P98174 961 aa6.83□□□□□ -1.32
SCLT1-207ENST00000506233 KIAA1755Q5JYT7 1200 aa6.83□□□□□ -1.32
SCLT1-207ENST00000506233 NT5DC1Q5TFE4 455 aa6.83□□□□□ -1.32
SCLT1-207ENST00000506233 APOBEC3HQ6NTF7 200 aaKnown RBP6.83□□□□□ -1.32
SCLT1-207ENST00000506233 CCAR1Q8IX12 1150 aaKnown RBP6.83□□□□□ -1.32
SCLT1-207ENST00000506233 SLC44A5Q8NCS7 719 aa6.83□□□□□ -1.32
SCLT1-207ENST00000506233 FBF1Q8TES7 1133 aa6.83□□□□□ -1.32
SCLT1-207ENST00000506233 CRYGNQ8WXF5 182 aa6.83□□□□□ -1.32
SCLT1-207ENST00000506233 FRMD6Q96NE9 622 aa6.83□□□□□ -1.32
SCLT1-207ENST00000506233 EIF4ENIF1Q9NRA8 985 aaKnown RBP6.83□□□□□ -1.32
SCLT1-207ENST00000506233 ANGEL1Q9UNK9 670 aaKnown RBP6.83□□□□□ -1.32
SCLT1-207ENST00000506233 ATP8A1Q9Y2Q0 1164 aa6.83□□□□□ -1.32
SCLT1-207ENST00000506233 COL2A1P02458 1487 aaPredicted RBP6.83□□□□□ -1.32
SCLT1-207ENST00000506233 MGAMO43451 1857 aa6.83□□□□□ -1.32
SCLT1-207ENST00000506233 SERPINB2P05120 415 aa6.83□□□□□ -1.32
SCLT1-207ENST00000506233 MRE11P49959 708 aa6.83□□□□□ -1.32
SCLT1-207ENST00000506233 PDE4BQ07343 736 aa6.83□□□□□ -1.32
SCLT1-207ENST00000506233 KRT32Q14532 448 aa6.83□□□□□ -1.32
SCLT1-207ENST00000506233 Q3C1V9 767 aa6.83□□□□□ -1.32
SCLT1-207ENST00000506233 BICDL1Q6ZP65 573 aa6.83□□□□□ -1.32
SCLT1-207ENST00000506233 C14orf80Q86SX3 495 aa6.83□□□□□ -1.32
SCLT1-207ENST00000506233 ZBED3Q96IU2 234 aaPredicted RBP6.83□□□□□ -1.32
SCLT1-207ENST00000506233 PPP1R12AO14974 1030 aaPredicted RBP6.83□□□□□ -1.32
SCLT1-207ENST00000506233 USP17L7P0C7H9 530 aa6.83□□□□□ -1.32
SCLT1-207ENST00000506233 MAP3K10Q02779 954 aa6.83□□□□□ -1.32
SCLT1-207ENST00000506233 SEPT6Q14141 434 aa6.83□□□□□ -1.32
SCLT1-207ENST00000506233 DHX8Q14562 1220 aaKnown RBP6.83□□□□□ -1.32
SCLT1-207ENST00000506233 CCDC144CPQ8IYA2 1237 aa6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms