RNA–Protein interactions for RNA: ENST00000506163.5

SMN1-204, Transcript of survival of motor neuron 1, telomeric, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMN1, Length 1,445 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN1-204ENST00000506163 APOBRQ0VD83 1088 aa20.7■□□□□ 0.9
SMN1-204ENST00000506163 TMTC3Q6ZXV5 915 aa20.7■□□□□ 0.9
SMN1-204ENST00000506163 FBXL16Q8N461 479 aa20.7■□□□□ 0.9
SMN1-204ENST00000506163 CCDC82Q8N4S0 544 aa20.7■□□□□ 0.9
SMN1-204ENST00000506163 ANKLE1Q8NAG6 615 aa20.7■□□□□ 0.9
SMN1-204ENST00000506163 SYTL5Q8TDW5 730 aaPredicted RBP20.7■□□□□ 0.9
SMN1-204ENST00000506163 ZHX1Q9UKY1 873 aaPredicted RBP20.7■□□□□ 0.9
SMN1-204ENST00000506163 hCG_1642624A0A1W2PR95 340 aa20.69■□□□□ 0.9
SMN1-204ENST00000506163 ASB14A6NK59 587 aa20.69■□□□□ 0.9
SMN1-204ENST00000506163 CAPN2P17655 700 aa20.69■□□□□ 0.9
SMN1-204ENST00000506163 PSMA5P28066 241 aa20.69■□□□□ 0.9
SMN1-204ENST00000506163 CDC27P30260 824 aa20.69■□□□□ 0.9
SMN1-204ENST00000506163 ALDH5A1P51649 535 aaPredicted RBP20.69■□□□□ 0.9
SMN1-204ENST00000506163 FUT2Q10981 343 aa20.69■□□□□ 0.9
SMN1-204ENST00000506163 BRF1Q92994 677 aa20.69■□□□□ 0.9
SMN1-204ENST00000506163 LZTS2Q9BRK4 669 aa20.69■□□□□ 0.9
SMN1-204ENST00000506163 ABHD16BQ9H3Z7 469 aa20.69■□□□□ 0.9
SMN1-204ENST00000506163 ZBTB43O43298 467 aa20.68■□□□□ 0.9
SMN1-204ENST00000506163 PTGS1P23219 599 aa20.68■□□□□ 0.9
SMN1-204ENST00000506163 GNAQP50148 359 aa20.68■□□□□ 0.9
SMN1-204ENST00000506163 IRX5P78411 483 aaPredicted RBP20.68■□□□□ 0.9
SMN1-204ENST00000506163 GHRHRQ02643 423 aa20.68■□□□□ 0.9
SMN1-204ENST00000506163 CCDC144BQ3MJ40 725 aa20.68■□□□□ 0.9
SMN1-204ENST00000506163 TMEM63BQ5T3F8 832 aa20.68■□□□□ 0.9
SMN1-204ENST00000506163 RUFY3Q7L099 469 aa20.68■□□□□ 0.9
SMN1-204ENST00000506163 EEPD1Q7L9B9 569 aa20.68■□□□□ 0.9
SMN1-204ENST00000506163 TAAR1Q96RJ0 339 aa20.68■□□□□ 0.9
SMN1-204ENST00000506163 UPF3BQ9BZI7 483 aaKnown RBP20.68■□□□□ 0.9
SMN1-204ENST00000506163 TM6SF1Q9BZW5 370 aa20.68■□□□□ 0.9
SMN1-204ENST00000506163 PDGFCQ9NRA1 345 aa20.68■□□□□ 0.9
SMN1-204ENST00000506163 C11orf97A0A1B0GVM6 126 aaPredicted RBP20.67■□□□□ 0.9
SMN1-204ENST00000506163 COL6A1P12109 1028 aa20.67■□□□□ 0.9
SMN1-204ENST00000506163 AKR1A1P14550 325 aa20.67■□□□□ 0.9
SMN1-204ENST00000506163 TOB2Q14106 344 aaPredicted RBP20.67■□□□□ 0.9
SMN1-204ENST00000506163 C8orf34Q49A92 452 aa20.67■□□□□ 0.9
SMN1-204ENST00000506163 GJC2Q5T442 439 aaPredicted RBP20.67■□□□□ 0.9
SMN1-204ENST00000506163 TAPT1Q6NXT6 567 aa20.67■□□□□ 0.9
SMN1-204ENST00000506163 SYNE3Q6ZMZ3 975 aa20.67■□□□□ 0.9
SMN1-204ENST00000506163 FBXO16Q8IX29 292 aaPredicted RBP20.67■□□□□ 0.9
SMN1-204ENST00000506163 CFBP00751 764 aa20.66■□□□□ 0.9
SMN1-204ENST00000506163 EDNRBP24530 442 aa20.66■□□□□ 0.9
SMN1-204ENST00000506163 HSD17B4P51659 736 aa20.66■□□□□ 0.9
SMN1-204ENST00000506163 RTN1Q16799 776 aa20.66■□□□□ 0.9
SMN1-204ENST00000506163 NECAB2Q7Z6G3 386 aa20.66■□□□□ 0.9
SMN1-204ENST00000506163 RRP36Q96EU6 259 aaKnown RBP20.66■□□□□ 0.9
SMN1-204ENST00000506163 MAF1Q9H063 256 aa20.66■□□□□ 0.9
SMN1-204ENST00000506163 ADD3Q9UEY8 706 aaKnown RBP20.66■□□□□ 0.9
SMN1-204ENST00000506163 FAM184BQ9ULE4 1060 aa20.66■□□□□ 0.9
SMN1-204ENST00000506163 DNAH12Q6ZR08 3092 aa20.65■□□□□ 0.9
SMN1-204ENST00000506163 PGK1P00558 417 aa20.65■□□□□ 0.9
SMN1-204ENST00000506163 HOXA13P31271 388 aaPredicted RBP20.65■□□□□ 0.9
SMN1-204ENST00000506163 ADD1P35611 737 aaKnown RBP20.65■□□□□ 0.9
SMN1-204ENST00000506163 FGD1P98174 961 aa20.65■□□□□ 0.9
SMN1-204ENST00000506163 LRRC41Q15345 812 aa20.65■□□□□ 0.9
SMN1-204ENST00000506163 MCF2L2Q86YR7 1114 aa20.65■□□□□ 0.9
SMN1-204ENST00000506163 DNERQ8NFT8 737 aa20.65■□□□□ 0.9
SMN1-204ENST00000506163 LARP6Q9BRS8 491 aaKnown RBP20.65■□□□□ 0.9
SMN1-204ENST00000506163 C11orf49Q9H6J7 331 aa20.65■□□□□ 0.9
SMN1-204ENST00000506163 LRRC37A2A6NM11 1700 aa20.65■□□□□ 0.9
SMN1-204ENST00000506163 CNTNAP5Q8WYK1 1306 aa20.65■□□□□ 0.9
SMN1-204ENST00000506163 GOLGA8AA7E2F4 631 aa20.64■□□□□ 0.89
SMN1-204ENST00000506163 GOLGA8BA8MQT2 603 aa20.64■□□□□ 0.89
SMN1-204ENST00000506163 RARBP10826 455 aa20.64■□□□□ 0.89
SMN1-204ENST00000506163 ADCYAP1R1P41586 468 aa20.64■□□□□ 0.89
SMN1-204ENST00000506163 EVCP57679 992 aa20.64■□□□□ 0.89
SMN1-204ENST00000506163 XPNPEP3Q9NQH7 507 aa20.64■□□□□ 0.89
SMN1-204ENST00000506163 NAP1L2Q9ULW6 460 aaPredicted RBP20.64■□□□□ 0.89
SMN1-204ENST00000506163 CYP46A1Q9Y6A2 500 aa20.64■□□□□ 0.89
SMN1-204ENST00000506163 MYADML2A6NDP7 307 aa20.63■□□□□ 0.89
SMN1-204ENST00000506163 ADAMTS4O75173 837 aa20.63■□□□□ 0.89
SMN1-204ENST00000506163 SMPD1P17405 629 aa20.63■□□□□ 0.89
SMN1-204ENST00000506163 RCAN1P53805 252 aa20.63■□□□□ 0.89
SMN1-204ENST00000506163 IL17RAQ96F46 866 aa20.63■□□□□ 0.89
SMN1-204ENST00000506163 RBM28Q9NW13 759 aaKnown RBP20.63■□□□□ 0.89
SMN1-204ENST00000506163 ALPK3Q96L96 1907 aa20.63■□□□□ 0.89
SMN1-204ENST00000506163 LOC102724159A0A0B4J2E5 919 aa20.62■□□□□ 0.89
SMN1-204ENST00000506163 DNM1LO00429 736 aa20.62■□□□□ 0.89
SMN1-204ENST00000506163 CTAGE5O15320 804 aa20.62■□□□□ 0.89
SMN1-204ENST00000506163 DUSP11O75319 330 aaKnown RBP20.62■□□□□ 0.89
SMN1-204ENST00000506163 MYCNP04198 464 aaPredicted RBP20.62■□□□□ 0.89
SMN1-204ENST00000506163 PDIA3P30101 505 aaKnown RBP20.62■□□□□ 0.89
SMN1-204ENST00000506163 PWP2Q15269 919 aaKnown RBP20.62■□□□□ 0.89
SMN1-204ENST00000506163 ARRDC4Q8NCT1 418 aa20.62■□□□□ 0.89
SMN1-204ENST00000506163 RMDN3Q96TC7 470 aa20.62■□□□□ 0.89
SMN1-204ENST00000506163 GNEQ9Y223 722 aaKnown RBP20.62■□□□□ 0.89
SMN1-204ENST00000506163 SYNRGQ9UMZ2 1314 aa20.62■□□□□ 0.89
SMN1-204ENST00000506163 CEP290O15078 2479 aa20.62■□□□□ 0.89
SMN1-204ENST00000506163 METAP2P50579 478 aaKnown RBP eCLIP20.61■□□□□ 0.89
SMN1-204ENST00000506163 CCSAPQ6IQ19 270 aaPredicted RBP20.61■□□□□ 0.89
SMN1-204ENST00000506163 TYW1BQ6NUM6 668 aa20.61■□□□□ 0.89
SMN1-204ENST00000506163 KLHDC9Q8NEP7 349 aa20.61■□□□□ 0.89
SMN1-204ENST00000506163 NSUN6Q8TEA1 469 aaKnown RBP20.61■□□□□ 0.89
SMN1-204ENST00000506163 VTA1Q9NP79 307 aa20.61■□□□□ 0.89
SMN1-204ENST00000506163 PXMP2Q9NR77 195 aa20.61■□□□□ 0.89
SMN1-204ENST00000506163 SEC63Q9UGP8 760 aaKnown RBP20.61■□□□□ 0.89
SMN1-204ENST00000506163 V9GY48 417 aaPredicted RBP20.61■□□□□ 0.89
SMN1-204ENST00000506163 NID2Q14112 1375 aa20.61■□□□□ 0.89
SMN1-204ENST00000506163 RBM47A0AV96 593 aaKnown RBP20.61■□□□□ 0.89
SMN1-204ENST00000506163 EIF2AK2P19525 551 aaKnown RBP20.61■□□□□ 0.89
SMN1-204ENST00000506163 ANAPC15P60006 121 aa20.61■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms