RNA–Protein interactions for RNA: ENST00000506055.5

PPARGC1A-204, Transcript of PPARG coactivator 1 alpha, humanhuman

TSL 1 (best)

Gene PPARGC1A, Length 2,627 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1A-204ENST00000506055 GPSM2P81274 684 aa8.51□□□□□ -1.05
PPARGC1A-204ENST00000506055 AMPD3Q01432 767 aa8.51□□□□□ -1.05
PPARGC1A-204ENST00000506055 GPS2Q13227 327 aa8.51□□□□□ -1.05
PPARGC1A-204ENST00000506055 DYMQ7RTS9 669 aa8.51□□□□□ -1.05
PPARGC1A-204ENST00000506055 REXO1Q8N1G1 1221 aaKnown RBP8.51□□□□□ -1.05
PPARGC1A-204ENST00000506055 CNBD1Q8NA66 436 aa8.51□□□□□ -1.05
PPARGC1A-204ENST00000506055 NOC3LQ8WTT2 800 aaKnown RBP8.51□□□□□ -1.05
PPARGC1A-204ENST00000506055 CALML4Q96GE6 196 aa8.51□□□□□ -1.05
PPARGC1A-204ENST00000506055 LACRTQ9GZZ8 138 aa8.51□□□□□ -1.05
PPARGC1A-204ENST00000506055 CUEDC2Q9H467 287 aa8.51□□□□□ -1.05
PPARGC1A-204ENST00000506055 L1RE1Q9UN81 338 aa8.51□□□□□ -1.05
PPARGC1A-204ENST00000506055 SAR1BQ9Y6B6 198 aa8.51□□□□□ -1.05
PPARGC1A-204ENST00000506055 AHDC1Q5TGY3 1603 aaPredicted RBP8.51□□□□□ -1.05
PPARGC1A-204ENST00000506055 GOLGB1Q14789 3259 aaKnown RBP8.51□□□□□ -1.05
PPARGC1A-204ENST00000506055 MACROD2A1Z1Q3 448 aa8.51□□□□□ -1.05
PPARGC1A-204ENST00000506055 PSMD14O00487 310 aa8.51□□□□□ -1.05
PPARGC1A-204ENST00000506055 KRT86O43790 486 aa8.51□□□□□ -1.05
PPARGC1A-204ENST00000506055 EIF6P56537 245 aaKnown RBP8.51□□□□□ -1.05
PPARGC1A-204ENST00000506055 TRAPPC3LQ5T215 181 aa8.51□□□□□ -1.05
PPARGC1A-204ENST00000506055 C16orf86Q6ZW13 317 aa8.51□□□□□ -1.05
PPARGC1A-204ENST00000506055 GPIHBP1Q8IV16 184 aa8.51□□□□□ -1.05
PPARGC1A-204ENST00000506055 RPGRQ92834 1020 aaKnown RBP8.51□□□□□ -1.05
PPARGC1A-204ENST00000506055 JAKMIP2Q96AA8 810 aa8.51□□□□□ -1.05
PPARGC1A-204ENST00000506055 COA7Q96BR5 231 aa8.51□□□□□ -1.05
PPARGC1A-204ENST00000506055 MMS19Q96T76 1030 aa8.51□□□□□ -1.05
PPARGC1A-204ENST00000506055 C7orf25Q9BPX7 421 aa8.51□□□□□ -1.05
PPARGC1A-204ENST00000506055 MMTAG2Q9BU76 263 aaKnown RBP8.51□□□□□ -1.05
PPARGC1A-204ENST00000506055 CD209Q9NNX6 404 aa8.51□□□□□ -1.05
PPARGC1A-204ENST00000506055 VPS18Q9P253 973 aa8.51□□□□□ -1.05
PPARGC1A-204ENST00000506055 LRWD1Q9UFC0 647 aa8.51□□□□□ -1.05
PPARGC1A-204ENST00000506055 RGL2O15211 777 aa8.5□□□□□ -1.05
PPARGC1A-204ENST00000506055 PHACTR2O75167 634 aa8.5□□□□□ -1.05
PPARGC1A-204ENST00000506055 CYLC1P35663 651 aaPredicted RBP8.5□□□□□ -1.05
PPARGC1A-204ENST00000506055 ZBED6P86452 979 aa8.5□□□□□ -1.05
PPARGC1A-204ENST00000506055 MEA1Q16626 185 aa8.5□□□□□ -1.05
PPARGC1A-204ENST00000506055 MIIPQ5JXC2 388 aa8.5□□□□□ -1.05
PPARGC1A-204ENST00000506055 MFSD14BQ5SR56 506 aa8.5□□□□□ -1.05
PPARGC1A-204ENST00000506055 CNNM4Q6P4Q7 775 aa8.5□□□□□ -1.05
PPARGC1A-204ENST00000506055 SV2BQ7L1I2 683 aa8.5□□□□□ -1.05
PPARGC1A-204ENST00000506055 TRAPPC11Q7Z392 1133 aa8.5□□□□□ -1.05
PPARGC1A-204ENST00000506055 FAM114A1Q8IWE2 563 aa8.5□□□□□ -1.05
PPARGC1A-204ENST00000506055 KIAA0895Q8NCT3 520 aa8.5□□□□□ -1.05
PPARGC1A-204ENST00000506055 NEDD1Q8NHV4 660 aa8.5□□□□□ -1.05
PPARGC1A-204ENST00000506055 NUP58Q9BVL2 599 aa8.5□□□□□ -1.05
PPARGC1A-204ENST00000506055 TTYH3Q9C0H2 523 aa8.5□□□□□ -1.05
PPARGC1A-204ENST00000506055 SEMA6BQ9H3T3 888 aa8.5□□□□□ -1.05
PPARGC1A-204ENST00000506055 MAGEF1Q9HAY2 307 aa8.5□□□□□ -1.05
PPARGC1A-204ENST00000506055 JADE2Q9NQC1 790 aa8.5□□□□□ -1.05
PPARGC1A-204ENST00000506055 ZNF185O15231 689 aa8.5□□□□□ -1.05
PPARGC1A-204ENST00000506055 PLEKP08567 350 aaPredicted RBP8.5□□□□□ -1.05
PPARGC1A-204ENST00000506055 IDEP14735 1019 aa8.5□□□□□ -1.05
PPARGC1A-204ENST00000506055 LMAN1P49257 510 aa8.5□□□□□ -1.05
PPARGC1A-204ENST00000506055 NT5C2P49902 561 aa8.5□□□□□ -1.05
PPARGC1A-204ENST00000506055 PICALMQ13492 652 aa8.5□□□□□ -1.05
PPARGC1A-204ENST00000506055 CASP8Q14790 479 aa8.5□□□□□ -1.05
PPARGC1A-204ENST00000506055 CALCRLQ16602 461 aa8.5□□□□□ -1.05
PPARGC1A-204ENST00000506055 FKBP15Q5T1M5 1219 aa8.5□□□□□ -1.05
PPARGC1A-204ENST00000506055 KRT26Q7Z3Y9 468 aa8.5□□□□□ -1.05
PPARGC1A-204ENST00000506055 CCDC102AQ96A19 550 aa8.5□□□□□ -1.05
PPARGC1A-204ENST00000506055 CDK5RAP3Q96JB5 506 aa8.5□□□□□ -1.05
PPARGC1A-204ENST00000506055 CCDC42Q96M95 316 aa8.5□□□□□ -1.05
PPARGC1A-204ENST00000506055 HINFPQ9BQA5 517 aa8.5□□□□□ -1.05
PPARGC1A-204ENST00000506055 FAM207AQ9NSI2 230 aaPredicted RBP8.5□□□□□ -1.05
PPARGC1A-204ENST00000506055 CALCOCO1Q9P1Z2 691 aa8.5□□□□□ -1.05
PPARGC1A-204ENST00000506055 GPR75-ASB3A0A0A6YYF3 556 aa8.5□□□□□ -1.05
PPARGC1A-204ENST00000506055 POTEMA6NI47 508 aa8.5□□□□□ -1.05
PPARGC1A-204ENST00000506055 SLC37A4O43826 429 aa8.5□□□□□ -1.05
PPARGC1A-204ENST00000506055 ZMYND10O75800 440 aa8.5□□□□□ -1.05
PPARGC1A-204ENST00000506055 EIF3JO75822 258 aaKnown RBP8.5□□□□□ -1.05
PPARGC1A-204ENST00000506055 SEMA3FQ13275 785 aa8.5□□□□□ -1.05
PPARGC1A-204ENST00000506055 CCDC96Q2M329 555 aa8.5□□□□□ -1.05
PPARGC1A-204ENST00000506055 LRRC47Q8N1G4 583 aaKnown RBP8.5□□□□□ -1.05
PPARGC1A-204ENST00000506055 TXLNBQ8N3L3 684 aa8.5□□□□□ -1.05
PPARGC1A-204ENST00000506055 RETREG2Q8NC44 543 aa8.5□□□□□ -1.05
PPARGC1A-204ENST00000506055 CAGE1Q8TC20 777 aa8.5□□□□□ -1.05
PPARGC1A-204ENST00000506055 TRERF1Q96PN7 1200 aa8.5□□□□□ -1.05
PPARGC1A-204ENST00000506055 UIMC1Q96RL1 719 aa8.5□□□□□ -1.05
PPARGC1A-204ENST00000506055 GPCPD1Q9NPB8 672 aa8.5□□□□□ -1.05
PPARGC1A-204ENST00000506055 MYMKA6NI61 221 aa8.49□□□□□ -1.05
PPARGC1A-204ENST00000506055 LRRIQ3A6PVS8 624 aaPredicted RBP8.49□□□□□ -1.05
PPARGC1A-204ENST00000506055 TDP2O95551 362 aa8.49□□□□□ -1.05
PPARGC1A-204ENST00000506055 KIF5AQ12840 1032 aa8.49□□□□□ -1.05
PPARGC1A-204ENST00000506055 GRB10Q13322 594 aa8.49□□□□□ -1.05
PPARGC1A-204ENST00000506055 SPA17Q15506 151 aa8.49□□□□□ -1.05
PPARGC1A-204ENST00000506055 FAM196AQ6ZSG2 479 aa8.49□□□□□ -1.05
PPARGC1A-204ENST00000506055 C2CD5Q86YS7 1000 aa8.49□□□□□ -1.05
PPARGC1A-204ENST00000506055 CLEC10AQ8IUN9 316 aa8.49□□□□□ -1.05
PPARGC1A-204ENST00000506055 CCDC170Q8IYT3 715 aa8.49□□□□□ -1.05
PPARGC1A-204ENST00000506055 EHBP1Q8NDI1 1231 aa8.49□□□□□ -1.05
PPARGC1A-204ENST00000506055 SMCR8Q8TEV9 937 aaPredicted RBP8.49□□□□□ -1.05
PPARGC1A-204ENST00000506055 GDAP1L1Q96MZ0 367 aa8.49□□□□□ -1.05
PPARGC1A-204ENST00000506055 GBP3Q9H0R5 595 aa8.49□□□□□ -1.05
PPARGC1A-204ENST00000506055 MMRN2Q9H8L6 949 aa8.49□□□□□ -1.05
PPARGC1A-204ENST00000506055 GGA1Q9UJY5 639 aa8.49□□□□□ -1.05
PPARGC1A-204ENST00000506055 MAST2Q6P0Q8 1798 aa8.49□□□□□ -1.05
PPARGC1A-204ENST00000506055 EIF3CLB5ME19 914 aaKnown RBP8.49□□□□□ -1.05
PPARGC1A-204ENST00000506055 F8W031 263 aaPredicted RBP8.49□□□□□ -1.05
PPARGC1A-204ENST00000506055 EPHB6O15197 1021 aa8.49□□□□□ -1.05
PPARGC1A-204ENST00000506055 PDHBP11177 359 aa8.49□□□□□ -1.05
PPARGC1A-204ENST00000506055 PLCG2P16885 1265 aa8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms