RNA–Protein interactions for RNA: ENST00000505945.1

SIL1-208, Transcript of SIL1 nucleotide exchange factor, humanhuman

TSL 1 (best)

Gene SIL1, Length 250 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIL1-208ENST00000505945 LCTP09848 1927 aa13.39□□□□□ -0.27
SIL1-208ENST00000505945 CCDC171Q6TFL3 1326 aa13.39□□□□□ -0.27
SIL1-208ENST00000505945 B4GALT4O60513 344 aa13.38□□□□□ -0.27
SIL1-208ENST00000505945 CALML3P27482 149 aa13.38□□□□□ -0.27
SIL1-208ENST00000505945 ALDH5A1P51649 535 aaPredicted RBP13.38□□□□□ -0.27
SIL1-208ENST00000505945 CCL23P55773 120 aa13.38□□□□□ -0.27
SIL1-208ENST00000505945 DUSP28Q4G0W2 176 aa13.38□□□□□ -0.27
SIL1-208ENST00000505945 AKNAD1Q5T1N1 836 aa13.38□□□□□ -0.27
SIL1-208ENST00000505945 PSRC1Q6PGN9 363 aaPredicted RBP13.38□□□□□ -0.27
SIL1-208ENST00000505945 SLC30A10Q6XR72 485 aa13.38□□□□□ -0.27
SIL1-208ENST00000505945 TICAM2Q86XR7 235 aa13.38□□□□□ -0.27
SIL1-208ENST00000505945 TBC1D10CQ8IV04 446 aa13.38□□□□□ -0.27
SIL1-208ENST00000505945 TTC14Q96N46 770 aa13.38□□□□□ -0.27
SIL1-208ENST00000505945 PBX4Q9BYU1 374 aa13.38□□□□□ -0.27
SIL1-208ENST00000505945 WDR11Q9BZH6 1224 aa13.38□□□□□ -0.27
SIL1-208ENST00000505945 TTC28Q96AY4 2481 aa13.38□□□□□ -0.27
SIL1-208ENST00000505945 LRRC37A2A6NM11 1700 aa13.38□□□□□ -0.27
SIL1-208ENST00000505945 FGBP02675 491 aa13.37□□□□□ -0.27
SIL1-208ENST00000505945 SDSP20132 328 aa13.37□□□□□ -0.27
SIL1-208ENST00000505945 ZNF543Q08ER8 600 aa13.37□□□□□ -0.27
SIL1-208ENST00000505945 RNF207Q6ZRF8 634 aa13.37□□□□□ -0.27
SIL1-208ENST00000505945 OTOP2Q7RTS6 562 aa13.37□□□□□ -0.27
SIL1-208ENST00000505945 HERVK_113Q902F9 699 aa13.37□□□□□ -0.27
SIL1-208ENST00000505945 ZKSCAN3Q9BRR0 538 aa13.37□□□□□ -0.27
SIL1-208ENST00000505945 NOC4LQ9BVI4 516 aaKnown RBP13.37□□□□□ -0.27
SIL1-208ENST00000505945 CXXC1Q9P0U4 656 aaPredicted RBP13.37□□□□□ -0.27
SIL1-208ENST00000505945 ZMYM6O95789 1325 aa13.37□□□□□ -0.27
SIL1-208ENST00000505945 RBM47A0AV96 593 aaKnown RBP13.36□□□□□ -0.27
SIL1-208ENST00000505945 GOLGA8HP0CJ92 632 aa13.36□□□□□ -0.27
SIL1-208ENST00000505945 SNHG28P0DPA3 235 aa13.36□□□□□ -0.27
SIL1-208ENST00000505945 PCP11498 1178 aaKnown RBP13.36□□□□□ -0.27
SIL1-208ENST00000505945 RPS6P62753 249 aaKnown RBP13.36□□□□□ -0.27
SIL1-208ENST00000505945 USP38Q8NB14 1042 aa13.36□□□□□ -0.27
SIL1-208ENST00000505945 SEZ6LQ9BYH1 1024 aa13.36□□□□□ -0.27
SIL1-208ENST00000505945 WNT8AQ9H1J5 351 aa13.36□□□□□ -0.27
SIL1-208ENST00000505945 ALDH8A1Q9H2A2 487 aaPredicted RBP13.36□□□□□ -0.27
SIL1-208ENST00000505945 CPVLQ9H3G5 476 aa13.36□□□□□ -0.27
SIL1-208ENST00000505945 LOC102724159A0A0B4J2E5 919 aa13.35□□□□□ -0.27
SIL1-208ENST00000505945 ZNF213O14771 459 aa13.35□□□□□ -0.27
SIL1-208ENST00000505945 MYL3P08590 195 aa13.35□□□□□ -0.27
SIL1-208ENST00000505945 MFAP1P55081 439 aaKnown RBP13.35□□□□□ -0.27
SIL1-208ENST00000505945 PURAQ00577 322 aaKnown RBP13.35□□□□□ -0.27
SIL1-208ENST00000505945 PDE4DQ08499 809 aa13.35□□□□□ -0.27
SIL1-208ENST00000505945 PWP2Q15269 919 aaKnown RBP13.35□□□□□ -0.27
SIL1-208ENST00000505945 SMC5Q8IY18 1101 aa13.35□□□□□ -0.27
SIL1-208ENST00000505945 OR6J1Q8NGC5 347 aa13.35□□□□□ -0.27
SIL1-208ENST00000505945 PPP1R13LQ8WUF5 828 aa13.35□□□□□ -0.27
SIL1-208ENST00000505945 ESR2Q92731 530 aa13.35□□□□□ -0.27
SIL1-208ENST00000505945 SCLYQ96I15 445 aa13.35□□□□□ -0.27
SIL1-208ENST00000505945 UBA5Q9GZZ9 404 aa13.35□□□□□ -0.27
SIL1-208ENST00000505945 RWDD1Q9H446 243 aaPredicted RBP13.35□□□□□ -0.27
SIL1-208ENST00000505945 RNF41Q9H4P4 317 aaPredicted RBP13.35□□□□□ -0.27
SIL1-208ENST00000505945 PRDM12Q9H4Q4 367 aa13.35□□□□□ -0.27
SIL1-208ENST00000505945 TRMT13Q9NUP7 481 aaKnown RBP13.35□□□□□ -0.27
SIL1-208ENST00000505945 POLR3EQ9NVU0 708 aa13.35□□□□□ -0.27
SIL1-208ENST00000505945 MSRAQ9UJ68 235 aa13.35□□□□□ -0.27
SIL1-208ENST00000505945 PNMA2Q9UL42 364 aa13.35□□□□□ -0.27
SIL1-208ENST00000505945 NEDD4P46934 1319 aa13.35□□□□□ -0.27
SIL1-208ENST00000505945 IGHDP01880 384 aa13.34□□□□□ -0.27
SIL1-208ENST00000505945 CYP2C9P11712 490 aa13.34□□□□□ -0.27
SIL1-208ENST00000505945 CPT1AP50416 773 aa13.34□□□□□ -0.27
SIL1-208ENST00000505945 USH1GQ495M9 461 aa13.34□□□□□ -0.27
SIL1-208ENST00000505945 CWC27Q6UX04 472 aaKnown RBP13.34□□□□□ -0.27
SIL1-208ENST00000505945 CHD1LQ86WJ1 897 aa13.34□□□□□ -0.27
SIL1-208ENST00000505945 DGKHQ86XP1 1220 aa13.34□□□□□ -0.27
SIL1-208ENST00000505945 PLEKHM2Q8IWE5 1019 aa13.34□□□□□ -0.27
SIL1-208ENST00000505945 PPM1EQ8WY54 764 aa13.34□□□□□ -0.27
SIL1-208ENST00000505945 COPS5Q92905 334 aa13.34□□□□□ -0.27
SIL1-208ENST00000505945 VWCEQ96DN2 955 aa13.34□□□□□ -0.27
SIL1-208ENST00000505945 MTIF3Q9H2K0 278 aaKnown RBP13.34□□□□□ -0.27
SIL1-208ENST00000505945 GPHNQ9NQX3 736 aaPredicted RBP13.34□□□□□ -0.27
SIL1-208ENST00000505945 CHD9Q3L8U1 2897 aa13.34□□□□□ -0.27
SIL1-208ENST00000505945 WDR19Q8NEZ3 1342 aa13.34□□□□□ -0.27
SIL1-208ENST00000505945 KDM4AO75164 1064 aa13.33□□□□□ -0.28
SIL1-208ENST00000505945 SUPT20HL2P0C7V6 817 aa13.33□□□□□ -0.28
SIL1-208ENST00000505945 EDNRBP24530 442 aa13.33□□□□□ -0.28
SIL1-208ENST00000505945 PPP2R5BQ15173 497 aa13.33□□□□□ -0.28
SIL1-208ENST00000505945 RAB30Q15771 203 aa13.33□□□□□ -0.28
SIL1-208ENST00000505945 NBPF20Q3BBV1 942 aa13.33□□□□□ -0.28
SIL1-208ENST00000505945 FAM47CQ5HY64 1035 aa13.33□□□□□ -0.28
SIL1-208ENST00000505945 GPATCH4Q5T3I0 446 aaKnown RBP13.33□□□□□ -0.28
SIL1-208ENST00000505945 RPUSD2Q8IZ73 545 aaKnown RBP13.33□□□□□ -0.28
SIL1-208ENST00000505945 DNERQ8NFT8 737 aa13.33□□□□□ -0.28
SIL1-208ENST00000505945 SCFD2Q8WU76 684 aa13.33□□□□□ -0.28
SIL1-208ENST00000505945 TBC1D5Q92609 795 aa13.33□□□□□ -0.28
SIL1-208ENST00000505945 GAS2L1Q99501 681 aaPredicted RBP13.33□□□□□ -0.28
SIL1-208ENST00000505945 MTG1Q9BT17 334 aaPredicted RBP13.33□□□□□ -0.28
SIL1-208ENST00000505945 NKX2-4Q9H2Z4 354 aa13.33□□□□□ -0.28
SIL1-208ENST00000505945 OSBPL3Q9H4L5 887 aa13.33□□□□□ -0.28
SIL1-208ENST00000505945 PRDM6Q9NQX0 595 aa13.33□□□□□ -0.28
SIL1-208ENST00000505945 YBX2Q9Y2T7 364 aaKnown RBP13.33□□□□□ -0.28
SIL1-208ENST00000505945 TNKSO95271 1327 aa13.33□□□□□ -0.28
SIL1-208ENST00000505945 B4E1Z4 1266 aa13.32□□□□□ -0.28
SIL1-208ENST00000505945 TXNP10599 105 aaKnown RBP13.32□□□□□ -0.28
SIL1-208ENST00000505945 RABGGTBP53611 331 aa13.32□□□□□ -0.28
SIL1-208ENST00000505945 NUCB1Q02818 461 aa13.32□□□□□ -0.28
SIL1-208ENST00000505945 AAMPQ13685 434 aa13.32□□□□□ -0.28
SIL1-208ENST00000505945 ADGRE1Q14246 886 aa13.32□□□□□ -0.28
SIL1-208ENST00000505945 DEFB128Q7Z7B8 93 aa13.32□□□□□ -0.28
SIL1-208ENST00000505945 IQCA1Q86XH1 822 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms